메뉴 건너뛰기




Volumn 120, Issue 4, 2010, Pages 753-763

Cloning and characterization of a putative GS3 ortholog involved in maize kernel development

Author keywords

[No Author keywords available]

Indexed keywords

ASSOCIATION MAPPING; DIFFERENT MECHANISMS; EVOLUTION OF GRAIN; GENE CONTROLLING; GRAIN SIZE; KERNEL WEIGHT; MAIZE GENES; MAIZE KERNELS; NUCLEOTIDE DIVERSITY; NUCLEOTIDE POLYMORPHISMS; ORTHOLOGS; PHYLOGENETIC ANALYSIS; POSITIVE SELECTION; PROMOTER REGION;

EID: 76049119436     PISSN: 00405752     EISSN: None     Source Type: Journal    
DOI: 10.1007/s00122-009-1196-x     Document Type: Article
Times cited : (122)

References (55)
  • 2
    • 51249171246 scopus 로고
    • Nuclear DNA content of some important plant species
    • Arumuganathan K, Earle ED (1991) Nuclear DNA content of some important plant species. Plant Mol Biol Rep 9: 208-218.
    • (1991) Plant Mol Biol Rep , vol.9 , pp. 208-218
    • Arumuganathan, K.1    Earle, E.D.2
  • 6
    • 1642514950 scopus 로고    scopus 로고
    • Pattern of diversity in the genomic region near the maize domestication gene tb1
    • Clark RM, Linton E, Messing J, Doebley JF (2004) Pattern of diversity in the genomic region near the maize domestication gene tb1. Proc Natl Acad Sci USA 101(3): 700-707.
    • (2004) Proc Natl Acad Sci USA , vol.101 , Issue.3 , pp. 700-707
    • Clark, R.M.1    Linton, E.2    Messing, J.3    Doebley, J.F.4
  • 7
    • 14744267197 scopus 로고    scopus 로고
    • Updating the 'crop circle
    • Devos KM (2005) Updating the 'crop circle'. Curr Opin Plant Biol 8: 155-162.
    • (2005) Curr Opin Plant Biol , vol.8 , pp. 155-162
    • Devos, K.M.1
  • 8
    • 0028338892 scopus 로고
    • Inheritance of kernel weight in two maize-teosinte hybrid populations: Implications for crop evolution
    • Doebley J, Bacigalupo A, Stec A (1994) Inheritance of kernel weight in two maize-teosinte hybrid populations: implications for crop evolution. J Hered 85: 191-195.
    • (1994) J Hered , vol.85 , pp. 191-195
    • Doebley, J.1    Bacigalupo, A.2    Stec, A.3
  • 9
    • 33845618112 scopus 로고    scopus 로고
    • The molecular genetics of crop domestication
    • Doebley JF, Gaut BS, Smith BD (2006) The molecular genetics of crop domestication. Cell 127(7): 1309-1321.
    • (2006) Cell , vol.127 , Issue.7 , pp. 1309-1321
    • Doebley, J.F.1    Gaut, B.S.2    Smith, B.D.3
  • 10
    • 3042666256 scopus 로고    scopus 로고
    • MUSCLE: Multiple sequence alignment with high accuracy and high throughput
    • Edgar RC (2004) MUSCLE: multiple sequence alignment with high accuracy and high throughput. Nucl Acid Res 32(5): 1792-1797.
    • (2004) Nucl Acid Res , vol.32 , Issue.5 , pp. 1792-1797
    • Edgar, R.C.1
  • 11
    • 33645409862 scopus 로고    scopus 로고
    • GS3, a major QTL for grain length and weight and minor QTL for grain width and thickness in rice, encodes a putative transmembrane protein
    • Fan CC, Xing YZ, Mao HL, Lu TT, Han B, Xu CG, Li XH, Zhang QF (2006) GS3, a major QTL for grain length and weight and minor QTL for grain width and thickness in rice, encodes a putative transmembrane protein. Theor Appl Genet 112: 1164-1171.
    • (2006) Theor Appl Genet , vol.112 , pp. 1164-1171
    • Fan, C.C.1    Xing, Y.Z.2    Mao, H.L.3    Lu, T.T.4    Han, B.5    Xu, C.G.6    Li, X.H.7    Zhang, Q.F.8
  • 12
    • 58549101101 scopus 로고    scopus 로고
    • A causal C-A mutation in the second exon of GS3 highly associated with rice grain length and validated as a functional marker
    • Fan CC, Yu SB, Wang CR, Xing YZ (2009) A causal C-A mutation in the second exon of GS3 highly associated with rice grain length and validated as a functional marker. Theor Appl Genet 118: 465-472.
    • (2009) Theor Appl Genet , vol.118 , pp. 465-472
    • Fan, C.C.1    Yu, S.B.2    Wang, C.R.3    Xing, Y.Z.4
  • 14
    • 0032478340 scopus 로고    scopus 로고
    • Comparative genetics in the grasses
    • Gale MD, Devos KM (1998) Comparative genetics in the grasses. Proc Natl Acad Sci USA 95(5): 1971-1974.
    • (1998) Proc Natl Acad Sci USA , vol.95 , Issue.5 , pp. 1971-1974
    • Gale, M.D.1    Devos, K.M.2
  • 17
    • 0023339852 scopus 로고
    • A test of neutral molecular evolution based on nucleotide data
    • Hudson RR, Kreitman M, Aguadé M (1987) A test of neutral molecular evolution based on nucleotide data. Genetics 116: 153-159.
    • (1987) Genetics , vol.116 , pp. 153-159
    • Hudson, R.R.1    Kreitman, M.2    Aguadé, M.3
  • 18
    • 0032478264 scopus 로고    scopus 로고
    • Relationships of cereal crops and other grasses
    • Kellogg EA (1998) Relationships of cereal crops and other grasses. Proc Natl Acad Sci USA 95(5): 2005-2010.
    • (1998) Proc Natl Acad Sci USA , vol.95 , Issue.5 , pp. 2005-2010
    • Kellogg, E.A.1
  • 19
    • 0036808829 scopus 로고    scopus 로고
    • Hd3a, a rice ortholog of the ArabidopsisFT gene, promotes transition to flowering downstream of Hd1 under short-day conditions
    • Kojima S, Takahashi Y, Kobayashi Y, Monna L, Sasaki T, Araki T, Yano M (2002) Hd3a, a rice ortholog of the ArabidopsisFT gene, promotes transition to flowering downstream of Hd1 under short-day conditions. Plant Cell Physiol 43(10): 1096-1105.
    • (2002) Plant Cell Physiol , vol.43 , Issue.10 , pp. 1096-1105
    • Kojima, S.1    Takahashi, Y.2    Kobayashi, Y.3    Monna, L.4    Sasaki, T.5    Araki, T.6    Yano, M.7
  • 20
    • 33744830059 scopus 로고    scopus 로고
    • An SNP caused loss of seed shattering during rice domestication
    • Konishi S, Izawa T, Lin SY, Ebana K, Fukuta Y, Sasaki T, Yano M (2006) An SNP caused loss of seed shattering during rice domestication. Science 312(5778): 1392-1396.
    • (2006) Science , vol.312 , Issue.5778 , pp. 1392-1396
    • Konishi, S.1    Izawa, T.2    Lin, S.Y.3    Ebana, K.4    Fukuta, Y.5    Sasaki, T.6    Yano, M.7
  • 21
    • 3242810318 scopus 로고    scopus 로고
    • MEGA3: Integrated software for molecular evolutionary genetics analysis and sequence alignment
    • Kumar S, Tamura K, Nei M (2004) MEGA3: integrated software for molecular evolutionary genetics analysis and sequence alignment. Brief Bioinf 5(2): 150-163.
    • (2004) Brief Bioinf , vol.5 , Issue.2 , pp. 150-163
    • Kumar, S.1    Tamura, K.2    Nei, M.3
  • 22
    • 11244271539 scopus 로고    scopus 로고
    • Fine mapping of a grain-weight quantitative trait locus in the pericentromeric region of rice chromosome 3
    • Li JM, Thomson M, McCouch SR (2004) Fine mapping of a grain-weight quantitative trait locus in the pericentromeric region of rice chromosome 3. Genetics 168: 2187-2195.
    • (2004) Genetics , vol.168 , pp. 2187-2195
    • Li, J.M.1    Thomson, M.2    McCouch, S.R.3
  • 23
    • 33645469056 scopus 로고    scopus 로고
    • Rice domestication by reducing shattering
    • Li CB, Zhou AL, Sang T (2006) Rice domestication by reducing shattering. Science 311(5769): 1936-1939.
    • (2006) Science , vol.311 , Issue.5769 , pp. 1936-1939
    • Li, C.B.1    Zhou, A.L.2    Sang, T.3
  • 26
    • 0029360727 scopus 로고
    • Efficient isolation and mapping of Arabidopsis thaliana T-DNA insert junctions by thermal asymmetric interlaced PCR
    • Liu YG, Mitsukawa N, Oosumi T, Whittier RF (1995) Efficient isolation and mapping of Arabidopsis thaliana T-DNA insert junctions by thermal asymmetric interlaced PCR. Plant J 8(3): 457-463.
    • (1995) Plant J , vol.8 , Issue.3 , pp. 457-463
    • Liu, Y.G.1    Mitsukawa, N.2    Oosumi, T.3    Whittier, R.F.4
  • 27
    • 0035710746 scopus 로고    scopus 로고
    • Analysis of relative gene expression data using real-time quantitative PCR and the 2-ΔΔCT method
    • Livak KJ, Schmittgen TD (2001) Analysis of relative gene expression data using real-time quantitative PCR and the 2-ΔΔCT method. Methods 25: 402-408.
    • (2001) Methods , vol.25 , pp. 402-408
    • Livak, K.J.1    Schmittgen, T.D.2
  • 28
    • 34247614023 scopus 로고    scopus 로고
    • Epistatic interaction is an important genetic basis of grain yield and its components in maize
    • Ma XQ, Tang JH, Teng WT, Yan JB, Meng YJ, Li JS (2007) Epistatic interaction is an important genetic basis of grain yield and its components in maize. Mol Breed 20(1): 41-51.
    • (2007) Mol Breed , vol.20 , Issue.1 , pp. 41-51
    • Ma, X.Q.1    Tang, J.H.2    Teng, W.T.3    Yan, J.B.4    Meng, Y.J.5    Li, J.S.6
  • 29
    • 33845801278 scopus 로고    scopus 로고
    • Two cytosolic glutamine synthetase isoforms of maize are specifically involved in the control of grain production
    • Martin A, Lee J, Kichey T, Gerentes D, Zivy M, Tatout C, Dubois F, Balliau T et al (2006) Two cytosolic glutamine synthetase isoforms of maize are specifically involved in the control of grain production. Plant Cell 18: 3252-3274.
    • (2006) Plant Cell , vol.18 , pp. 3252-3274
    • Martin, A.1    Lee, J.2    Kichey, T.3    Gerentes, D.4    Zivy, M.5    Tatout, C.6    Dubois, F.7    Balliau, T.8
  • 30
    • 69949135484 scopus 로고    scopus 로고
    • Association mapping: Critical considerations shift from genotyping to experimental design
    • doi: 10. 1105/tpc. 109. 068437
    • Myles S, Peiffer J, Brown PJ, Ersoz ES, Zhang Z, Costich DE, Buckler ES (2009) Association mapping: Critical considerations shift from genotyping to experimental design. Plant Cell. doi: 10. 1105/tpc. 109. 068437.
    • (2009) Plant Cell
    • Myles, S.1    Peiffer, J.2    Brown, P.J.3    Ersoz, E.S.4    Zhang, Z.5    Costich, D.E.6    Buckler, E.S.7
  • 34
    • 0032972599 scopus 로고    scopus 로고
    • DnaSP version 3: An integrated program for molecular population genetics and molecular evolution analysis
    • Rozas J, Rozas R (1999) DnaSP version 3: an integrated program for molecular population genetics and molecular evolution analysis. Bioinformatics 15(2): 174-175.
    • (1999) Bioinformatics , vol.15 , Issue.2 , pp. 174-175
    • Rozas, J.1    Rozas, R.2
  • 35
    • 1542308451 scopus 로고    scopus 로고
    • New in silico insight into the synteny between rice (Oryza sativa L.) and maize (Zea mays L.) highlights reshuffling and identifies new duplications in the rice genome
    • Salse J, Piégu B, Cooke R, Delseny M (2004) New in silico insight into the synteny between rice (Oryza sativa L.) and maize (Zea mays L.) highlights reshuffling and identifies new duplications in the rice genome. Plant J 38: 396-409.
    • (2004) Plant J , vol.38 , pp. 396-409
    • Salse, J.1    Piégu, B.2    Cooke, R.3    Delseny, M.4
  • 36
    • 0032413101 scopus 로고    scopus 로고
    • Evidence that a recent increase in maize genome size was caused by the massive amplification of intergene retrotransposons
    • SanMiguel P, Bennetzen JL (1998) Evidence that a recent increase in maize genome size was caused by the massive amplification of intergene retrotransposons. Ann Bot 82: 37-44.
    • (1998) Ann Bot , vol.82 , pp. 37-44
    • Sanmiguel, P.1    Bennetzen, J.L.2
  • 37
    • 48349120780 scopus 로고    scopus 로고
    • Deletion in a gene associated with grain size increased yields during rice domestication
    • Shomura A, Izawa T, Ebana K, Ebitani T, Kanegae H, Konishi S, Yano M (2008) Deletion in a gene associated with grain size increased yields during rice domestication. Nat Genet 40(8): 1023-1028.
    • (2008) Nat Genet , vol.40 , Issue.8 , pp. 1023-1028
    • Shomura, A.1    Izawa, T.2    Ebana, K.3    Ebitani, T.4    Kanegae, H.5    Konishi, S.6    Yano, M.7
  • 38
    • 34247614065 scopus 로고    scopus 로고
    • A QTL for rice grain width and weight encodes a previously unknown RING-type E3 ubiquitin ligase
    • Song XJ, Huang W, Shi M, Zhu MZ, Lin HX (2007) A QTL for rice grain width and weight encodes a previously unknown RING-type E3 ubiquitin ligase. Nat Genet 39(5): 623-630.
    • (2007) Nat Genet , vol.39 , Issue.5 , pp. 623-630
    • Song, X.J.1    Huang, W.2    Shi, M.3    Zhu, M.Z.4    Lin, H.X.5
  • 39
    • 0024313579 scopus 로고
    • Statistical method for testing the neutral mutation hypothesis by DNA polymorphism
    • Tajima F (1989) Statistical method for testing the neutral mutation hypothesis by DNA polymorphism. Genetics 123: 585-595.
    • (1989) Genetics , vol.123 , pp. 585-595
    • Tajima, F.1
  • 41
    • 3042595170 scopus 로고    scopus 로고
    • Selection versus demography: A multilocus investigation of the domestication process in maize
    • Tenaillon MI, U'Ren J, Tenaillon O, Gaut BS (2004) Selection versus demography: a multilocus investigation of the domestication process in maize. Mol Biol Evol 21(7): 1214-1225.
    • (2004) Mol Biol Evol , vol.21 , Issue.7 , pp. 1214-1225
    • Tenaillon, M.I.1    U'Ren, J.2    Tenaillon, O.3    Gaut, B.S.4
  • 43
    • 55749110587 scopus 로고    scopus 로고
    • Quantitative trait loci (QTL) analysis for rice grain width and fine mapping of an identified QTL allele gw-5 in a recombination hotspot region on chromosome 5
    • Wan XY, Weng JF, Zhai HQ, Wang JK, Lei CL, Liu XL, Guo T, Jiang L, Su N, Wan JM (2008) Quantitative trait loci (QTL) analysis for rice grain width and fine mapping of an identified QTL allele gw-5 in a recombination hotspot region on chromosome 5. Genetics 179: 2239-2252.
    • (2008) Genetics , vol.179 , pp. 2239-2252
    • Wan, X.Y.1    Weng, J.F.2    Zhai, H.Q.3    Wang, J.K.4    Lei, C.L.5    Liu, X.L.6    Guo, T.7    Jiang, L.8    Su, N.9    Wan, J.M.10
  • 46
    • 0032712146 scopus 로고    scopus 로고
    • The molecular evolution of terminal ear1, a regulatory gene in the genus Zea
    • White SE, Doebley JF (1999) The molecular evolution of terminal ear1, a regulatory gene in the genus Zea. Genetics 153: 1455-1462.
    • (1999) Genetics , vol.153 , pp. 1455-1462
    • White, S.E.1    Doebley, J.F.2
  • 48
    • 76049090477 scopus 로고    scopus 로고
    • Abstract of 50th annual maize genetics conference, 27 February-1 March 2008, Washington, DC
    • Wilson R (2008) Sequence and assembly of the maize B73 genome. Abstract of 50th annual maize genetics conference, 27 February-1 March 2008, Washington, DC, p 18.
    • (2008) Sequence and Assembly of the Maize B73 Genome , pp. 18
    • Wilson, R.1
  • 51
    • 10844226383 scopus 로고    scopus 로고
    • Comparative analyses of QTL for important agronomic traits between maize and rice
    • Yan JB, Tang H, Huang YQ, Zheng YL, Li JS (2004) Comparative analyses of QTL for important agronomic traits between maize and rice. Acta Genet Sin 31(12): 1401-1407.
    • (2004) Acta Genet Sin , vol.31 , Issue.12 , pp. 1401-1407
    • Yan, J.B.1    Tang, H.2    Huang, Y.Q.3    Zheng, Y.L.4    Li, J.S.5
  • 52
    • 33745700366 scopus 로고    scopus 로고
    • Quantitative trait loci mapping and epistatic analysis for grain yield and yield components using molecular markers with an elite maize hybrid
    • Yan JB, Tang H, Huang YQ, Li JS, Zheng YL (2006) Quantitative trait loci mapping and epistatic analysis for grain yield and yield components using molecular markers with an elite maize hybrid. Euphytica 149: 121-131.
    • (2006) Euphytica , vol.149 , pp. 121-131
    • Yan, J.B.1    Tang, H.2    Huang, Y.Q.3    Li, J.S.4    Zheng, Y.L.5
  • 54
    • 0037023384 scopus 로고    scopus 로고
    • A draft sequence of the rice genome (Oryza sativa L. ssp. indica)
    • Yu J, Hu SN, Wang J, Wong G, Li SG, Liu B, Deng YJ et al (2002) A draft sequence of the rice genome (Oryza sativa L. ssp. indica). Science 296(5565): 79-92.
    • (2002) Science , vol.296 , Issue.5565 , pp. 79-92
    • Yu, J.1    Hu, S.N.2    Wang, J.3    Wong, G.4    Li, S.G.5    Liu, B.6    Deng, Y.J.7


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.