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Volumn 283, Issue 1, 2010, Pages 1-12

A trial of minimization of chromosome 7 in Aspergillus oryzae by multiple chromosomal deletions

Author keywords

Aspergillus oryzae; Deletion; Minimization; Morphology

Indexed keywords

AMYLASE; 5-FLUOROOROTIC ACID; DRUG DERIVATIVE; FLUOROOROTIC ACID; OROTIC ACID;

EID: 75649130056     PISSN: 16174615     EISSN: None     Source Type: Journal    
DOI: 10.1007/s00438-009-0494-y     Document Type: Article
Times cited : (11)

References (46)
  • 3
    • 0030018118 scopus 로고    scopus 로고
    • Selection of multiple disruption events in Aspergillus fumigatus using the orotidine-5'-decarboxylase gene, pyrG, as a unique transformation marker
    • DOI 10.1007/s002940050103
    • C d'Enfert 1996 Selection of multiple disruption events in Aspergillus fumigatus using the orotidine-5'-decarboxylase gene, pyrG, as a unique transformation marker Curr Genet 30 76 82 10.1007/s002940050103 8662213 (Pubitemid 26257616)
    • (1996) Current Genetics , vol.30 , Issue.1 , pp. 76-82
    • D'Enfert, C.1
  • 4
    • 0037124373 scopus 로고    scopus 로고
    • Synapsis of DNA ends by DNA-dependent protein kinase
    • DOI 10.1093/emboj/cdf299
    • LG DeFazio RM Stansel JD Griffith G Chu 2002 Synapsis of DNA sends by DNA-dependent protein kinase EMBO J 21 3192 3200 10.1093/emboj/cdf299 1:CAS:528:DC%2BD38XlsVSlurY%3D 12065431 (Pubitemid 34670402)
    • (2002) EMBO Journal , vol.21 , Issue.12 , pp. 3192-3200
    • DeFazio, L.G.1    Stansel, R.M.2    Griffith, J.D.3    Chu, G.4
  • 5
    • 0026739422 scopus 로고
    • Estimation of chromosome number and size by pulsed-field gel electrophoresis (PFGE) in medically important Candida species
    • 1:CAS:528:DyaK38XmsVynsLY%3D 1479351
    • M Doi M Homma A Chindamporn K Tanaka 1992 Estimation of chromosome number and size by pulsed-field gel electrophoresis (PFGE) in medically important Candida species J Gen Microbiol 138 2243 2251 1:CAS:528:DyaK38XmsVynsLY%3D 1479351
    • (1992) J Gen Microbiol , vol.138 , pp. 2243-2251
    • Doi, M.1    Homma, M.2    Chindamporn, A.3    Tanaka, K.4
  • 7
    • 33846880495 scopus 로고    scopus 로고
    • Highly efficient concerted evolution in the ribosomal DNA repeats: Total rDNA repeat variation revealed by whole-genome shotgun sequence data
    • DOI 10.1101/gr.5457707
    • AR Ganley T Kobayashi 2007 Highly efficient concerted evolution in the ribosomal DNA repeats: total rDNA repeat variation revealed by whole-genome shotgun sequence data Genome Res 17 184 191 10.1101/gr.5457707 1:CAS:528:DC%2BD2sXhsFKisrg%3D 17200233 (Pubitemid 46220763)
    • (2007) Genome Research , vol.17 , Issue.2 , pp. 184-191
    • Ganley, A.R.D.1    Kobayashi, T.2
  • 10
    • 85004562322 scopus 로고
    • Integrative transformation of Aspergillus oryzae with a plasmid containing the Aspergillus nidulans argB gene
    • 1:CAS:528:DyaL2sXls12qtrc%3D
    • K Gomi Y Iimura S Hara 1987 Integrative transformation of Aspergillus oryzae with a plasmid containing the Aspergillus nidulans argB gene Agric Biol Chem 51 2549 2555 1:CAS:528:DyaL2sXls12qtrc%3D
    • (1987) Agric Biol Chem , vol.51 , pp. 2549-2555
    • Gomi, K.1    Iimura, Y.2    Hara, S.3
  • 11
    • 0027078416 scopus 로고
    • Transformation of the industrial strain of Aspergillus oryzae with the homologous amdS gene as a dominant selectable marker
    • DOI 10.1016/0922-338X(92)90037-U
    • K Gomi K Kitamoto C Kumagai 1992 Transformation of the industrial strain of Aspergillus oryzae with the homologous amdS gene as a dominant selectable marker J Ferment Bioeng 74 389 391 10.1016/0922-338X(92)90037-U 1:CAS:528:DyaK3sXlvVaitg%3D%3D (Pubitemid 23048556)
    • (1992) Journal of Fermentation and Bioengineering , vol.74 , Issue.6 , pp. 389-391
    • Gomi, K.1    Kitamoto, K.2    Kumagai, C.3
  • 12
    • 0037399388 scopus 로고    scopus 로고
    • Chromosomal deletion formation system based on Tn5 double transposition: Use for making minimal genomes and essential gene analysis
    • DOI 10.1101/gr.611403
    • IY Goryshin TA Naumann J Apodaca WS Reznikoff 2003 Chromosomal deletion formation system based on Tn5 double transposition: use for making minimal genomes and essential gene analysis Genome Res 13 644 653 10.1101/gr.611403 1:CAS:528:DC%2BD3sXjt1Sqt7g%3D 12654720 (Pubitemid 36511923)
    • (2003) Genome Research , vol.13 , Issue.4 , pp. 644-653
    • Goryshin, I.Y.1    Naumann, T.A.2    Apodaca, J.3    Reznikoff, W.S.4
  • 14
    • 10044249969 scopus 로고    scopus 로고
    • Erratum: Conditional lethal amber mutations in essential Escherichia coli genes (Journal of Bacteriology (2004) 186, 9 (2673-2681))
    • DOI 10.1128/JB.186.24.8547.2004
    • CD Herring FR Blattner 2004 Conditional lethal amber mutations in essential Escherichia coli genes J Bacteriol 186 8547 10.1128/JB.186.24.8547. 2004 1:CAS:528:DC%2BD2cXhtFSgsrjL (Pubitemid 39603249)
    • (2004) Journal of Bacteriology , vol.186 , Issue.24 , pp. 8547
    • Herring, C.D.1    Blattner, F.R.2
  • 15
    • 0032764518 scopus 로고    scopus 로고
    • Global transposon mutagenesis and a minimal mycoplasma genome
    • 10.1126/science.286.5447.2165 1:CAS:528:DyaK1MXotFGru70%3D 10591650
    • CA Hutchison SN Peterson SR Gill RT Cline O White CM Fraser HO Smith JC Venter 1999 Global transposon mutagenesis and a minimal mycoplasma genome Science 286 2165 2169 10.1126/science.286.5447.2165 1:CAS:528:DyaK1MXotFGru70%3D 10591650
    • (1999) Science , vol.286 , pp. 2165-2169
    • Hutchison, C.A.1    Peterson, S.N.2    Gill, S.R.3    Cline, R.T.4    White, O.5    Fraser, C.M.6    Smith, H.O.7    Venter, J.C.8
  • 16
    • 4544292483 scopus 로고    scopus 로고
    • Adenine auxotrophic mutants of Aspergillus oryzae: Development of a novel transformation system with triple auxotrophic hosts
    • DOI 10.1271/bbb.68.656
    • FJ Jin J Maruyama PR Juvvadi M Arioka K Kitamoto 2004 Adenine auxotrophic mutants of Aspergillus oryzae: development of a novel transformation system with triple auxotrophic hosts Biosci Biotechnol Biochem 68 656 662 10.1271/bbb.68.656 1:CAS:528:DC%2BD2cXjt1OktLY%3D 15056900 (Pubitemid 39251505)
    • (2004) Bioscience, Biotechnology and Biochemistry , vol.68 , Issue.3 , pp. 656-662
    • Jin, F.J.1    Maruyama, J.-I.2    Juvvadi, P.R.3    Arioka, M.4    Kitamoto, K.5
  • 17
    • 4644219707 scopus 로고    scopus 로고
    • Development of a novel quadruple auxotrophic host transformation system by argB gene disruption using adeA gene and exploiting adenine auxotrophy in Aspergillus oryzae
    • DOI 10.1016/j.femsle.2004.08.025, PII S0378109704006263
    • FJ Jin J Maruyama PR Juvvadi M Arioka K Kitamoto 2004 Development of a novel quadruple auxotrophic host transformation system by argB gene disruption using adeA gene and exploiting adenine auxotrophy in Aspergillus oryzae FEMS Microbiol Lett 239 79 85 10.1016/j.femsle.2004.08.025 1:CAS:528: DC%2BD2cXnvV2ltLo%3D 15451104 (Pubitemid 39296719)
    • (2004) FEMS Microbiology Letters , vol.239 , Issue.1 , pp. 79-85
    • Jin, F.J.1    Maruyama, J.-I.2    Juvvadi, P.R.3    Arioka, M.4    Kitamoto, K.5
  • 18
    • 70149106165 scopus 로고    scopus 로고
    • Identification of bHLH-type transcription regulator gene by systematically deleting large chromosomal segments in Aspergillus oryzae
    • Jin FJ, Takahashi T, Machida M, Koyama Y (2009) Identification of bHLH-type transcription regulator gene by systematically deleting large chromosomal segments in Aspergillus oryzae. Appl Environ Microbiol 75:5943-5951
    • (2009) Appl Environ Microbiol , vol.75 , pp. 5943-5951
    • Jin, F.J.1    Takahashi, T.2    MacHida, M.3    Koyama, Y.4
  • 19
    • 0034793039 scopus 로고    scopus 로고
    • A Ku bridge over broken DNA
    • DOI 10.1016/S0969-2126(01)00658-X, PII S096921260100658X
    • JM Jones M Gellert W Yang 2001 A Ku brigde over broken DNA Structure 9 881 884 10.1016/S0969-2126(01)00658-X 1:CAS:528:DC%2BD3MXnsF2ntbY%3D 11591342 (Pubitemid 32972154)
    • (2001) Structure , vol.9 , Issue.10 , pp. 881-884
    • Jones, J.M.1    Gellert, M.2    Yang, W.3
  • 21
    • 40549139739 scopus 로고    scopus 로고
    • Construction of long chromosomal deletion mutants of Escherichia coli and minimization of the genome
    • 10.1007/978-1-59745-321-9-18
    • J Kato M Hashimoto 2007 Construction of long chromosomal deletion mutants of Escherichia coli and minimization of the genome Methods Mol Biol 416 279 294 10.1007/978-1-59745-321-9-18
    • (2007) Methods Mol Biol , vol.416 , pp. 279-294
    • Kato, J.1    Hashimoto, M.2
  • 23
    • 85006164721 scopus 로고
    • Electrophoretic karyotype and gene assignment to chromosomes of Aspergillus oryzae
    • 10.1271/bbb.58.1467 1:CAS:528:DyaK2cXlvFOns7Y%3D 7765278
    • K Kitamoto K Kimura K Gomi C Kumagai 1994 Electrophoretic karyotype and gene assignment to chromosomes of Aspergillus oryzae Biosci Biotechnol Biochem 58 1467 1470 10.1271/bbb.58.1467 1:CAS:528:DyaK2cXlvFOns7Y%3D 7765278
    • (1994) Biosci Biotechnol Biochem , vol.58 , pp. 1467-1470
    • Kitamoto, K.1    Kimura, K.2    Gomi, K.3    Kumagai, C.4
  • 24
    • 0032535478 scopus 로고    scopus 로고
    • Expansion and contraction of ribosomal DNA repeats in Saccharomyces cerevisiae: Requirement of replication fork blocking (Fob1) protein and the role of RNA polymerase i
    • 10.1101/gad.12.24.3821 1:CAS:528:DyaK1MXmtFGisg%3D%3D 9869636
    • T Kobayashi DJ Heck M Nomura T Horiuchi 1998 Expansion and contraction of ribosomal DNA repeats in Saccharomyces cerevisiae: requirement of replication fork blocking (Fob1) protein and the role of RNA polymerase I Genes Dev 12 3821 3830 10.1101/gad.12.24.3821 1:CAS:528:DyaK1MXmtFGisg%3D%3D 9869636
    • (1998) Genes Dev , vol.12 , pp. 3821-3830
    • Kobayashi, T.1    Heck, D.J.2    Nomura, M.3    Horiuchi, T.4
  • 28
    • 0034220798 scopus 로고    scopus 로고
    • Pyrithiamine resistance gene (ptrA) of Aspergillus oryzae: Cloning, characterization and application as a dominant selectable marker for transformation
    • 10.1271/bbb.64.1416 1:CAS:528:DC%2BD3cXlvFGruro%3D 10945258
    • T Kubodera N Yamashita A Nishimura 2000 Pyrithiamine resistance gene (ptrA) of Aspergillus oryzae: cloning, characterization and application as a dominant selectable marker for transformation Biosci Biotechnol Biochem 64 1416 1421 10.1271/bbb.64.1416 1:CAS:528:DC%2BD3cXlvFGruro%3D 10945258
    • (2000) Biosci Biotechnol Biochem , vol.64 , pp. 1416-1421
    • Kubodera, T.1    Yamashita, N.2    Nishimura, A.3
  • 30
    • 0023464058 scopus 로고
    • Transformation of Aspergillus oryzae using the Aspergillus niger pyrG gene
    • 10.1007/BF00327197 1:CAS:528:DyaL1cXovV2itg%3D%3D 3481025
    • IE Mattern S Unkles JR Kinghorn PH Pouwels CA van den Hondel 1987 Transformation of Aspergillus oryzae using the Aspergillus niger pyrG gene Mol Gen Genet 210 460 461 10.1007/BF00327197 1:CAS:528:DyaL1cXovV2itg%3D%3D 3481025
    • (1987) Mol Gen Genet , vol.210 , pp. 460-461
    • Mattern, I.E.1    Unkles, S.2    Kinghorn, J.R.3    Pouwels, P.H.4    Van Den Hondel, C.A.5
  • 31
    • 34248664408 scopus 로고    scopus 로고
    • Large scale deletions in the Saccharomyces cerevisiae genome create strains with altered regulation of carbon metabolism
    • DOI 10.1007/s00253-007-0859-2
    • K Murakami E Tao Y Ito M Sugiyama Y Kaneko S Harashima T Sumiya A Nakamura M Nishizawa 2007 Large scale deletions in the Saccharomyces cerevisiae genome create strains with altered regulation of carbon metabolism Appl Microbiol Biotechnol 75 589 597 10.1007/s00253-007-0859-2 1:CAS:528: DC%2BD2sXltlarsbw%3D 17345083 (Pubitemid 46776547)
    • (2007) Applied Microbiology and Biotechnology , vol.75 , Issue.3 , pp. 589-597
    • Murakami, K.1    Tao, E.2    Ito, Y.3    Sugiyama, M.4    Kaneko, Y.5    Harashima, S.6    Sumiya, T.7    Nakamura, A.8    Nishizawa, M.9
  • 36
    • 8644233254 scopus 로고    scopus 로고
    • Efficient gene disruption in the koji -mold Aspergillus sojae using a novel variation of the positive-negative method
    • DOI 10.1007/s00438-004-1062-0
    • T Takahashi O Hatamoto Y Koyama K Abe 2004 Efficient gene disruption in the koji-mold Aspergillus sojae using a novel variation of the positive-negative method Mol Genet Genomics 272 344 352 10.1007/s00438-004-1062-0 1:CAS:528:DC%2BD2cXos12itrY%3D 15375695 (Pubitemid 39506568)
    • (2004) Molecular Genetics and Genomics , vol.272 , Issue.3 , pp. 344-352
    • Takahashi, T.1    Hatamoto, O.2    Koyama, Y.3    Abe, K.4
  • 37
    • 33646596933 scopus 로고    scopus 로고
    • Enhanced gene targeting frequency in ku70 and ku80 disruption mutants of Aspergillus sojae and Aspergillus oryzae
    • DOI 10.1007/s00438-006-0104-1
    • T Takahashi T Masuda Y Koyama 2006 Enhanced gene targeting frequency in ku70 and ku80 disruption mutants of Aspergillus sojae and Aspergillus oryzae Mol Genet Genomics 275 460 470 10.1007/s00438-006-0104-1 1:CAS:528: DC%2BD28XksFShtL0%3D 16470383 (Pubitemid 43725263)
    • (2006) Molecular Genetics and Genomics , vol.275 , Issue.5 , pp. 460-470
    • Takahashi, T.1    Masuda, T.2    Koyama, Y.3
  • 38
    • 57449088397 scopus 로고    scopus 로고
    • Generation of large chromosomal deletions in koji molds Aspergillus oryzae and Aspergillus sojae via a loop-out recombination
    • 10.1128/AEM.00692-08 1:CAS:528:DC%2BD1MXnvVWl 18952883
    • T Takahashi FJ Jin M Sunagawa M Machida Y Koyama 2008 Generation of large chromosomal deletions in koji molds Aspergillus oryzae and Aspergillus sojae via a loop-out recombination Appl Environ Microbiol 74 7684 7693 10.1128/AEM.00692-08 1:CAS:528:DC%2BD1MXnvVWl 18952883
    • (2008) Appl Environ Microbiol , vol.74 , pp. 7684-7693
    • Takahashi, T.1    Jin, F.J.2    Sunagawa, M.3    MacHida, M.4    Koyama, Y.5
  • 39
    • 70149094090 scopus 로고    scopus 로고
    • Nonhomologous end-joining deficiency allows large chromosomal deletions to be produced by replacement-type recombination in Aspergillus strains
    • Takahashi T, Jin FJ, Koyama Y. (2009) Nonhomologous end-joining deficiency allows large chromosomal deletions to be produced by replacement-type recombination in Aspergillus strains. Fungal Genet Biol 46:815-824
    • (2009) Fungal Genet Biol , vol.46 , pp. 815-824
    • Takahashi, T.1    Jin, F.J.2    Koyama, Y.3
  • 41
    • 0001895027 scopus 로고
    • The development of a homologous transformation system for Aspergillus oryzae based on the nitrate assimilation pathway: A convenient and general selection system for filamentous fungal transformation
    • 10.1007/BF00330571 1:CAS:528:DyaL1MXlt1yiur0%3D
    • SE Unkles EI Campbell YM de Ruiter-Jacobs M Broekhuijsen JA Marco D Carrez R Contreras CA van den Hondel JR Kinghorn 1989 The development of a homologous transformation system for Aspergillus oryzae based on the nitrate assimilation pathway: a convenient and general selection system for filamentous fungal transformation Mol Gen Genet 218 99 104 10.1007/BF00330571 1:CAS:528:DyaL1MXlt1yiur0%3D
    • (1989) Mol Gen Genet , vol.218 , pp. 99-104
    • Unkles, S.E.1    Campbell, E.I.2    De Ruiter-Jacobs, Y.M.3    Broekhuijsen, M.4    Marco, J.A.5    Carrez, D.6    Contreras, R.7    Van Den Hondel, C.A.8    Kinghorn, J.R.9
  • 42
    • 0000533258 scopus 로고
    • Breeding by protoplast fusion of koji mold, Aspergillus sojae
    • 1:CAS:528:DyaL2sXksFGmtb4%3D
    • S Ushijima T Nakadai 1987 Breeding by protoplast fusion of koji mold, Aspergillus sojae Agric Biol Chem 51 1051 1057 1:CAS:528:DyaL2sXksFGmtb4%3D
    • (1987) Agric Biol Chem , vol.51 , pp. 1051-1057
    • Ushijima, S.1    Nakadai, T.2
  • 43
    • 0023098176 scopus 로고
    • Development of a homologous transformation system for Aspergillus niger based on the pyrG gene
    • DOI 10.1007/BF00326538
    • W van Hartingsveldt IE Mattern CM van Zeijl PH Pouwels CA van den Hondel 1987 Development of a homologous transformation system for Aspergillus niger based on the pyrG gene Mol Gen Genet 206 71 75 10.1007/BF00326538 3472035 (Pubitemid 17014167)
    • (1987) Molecular and General Genetics , vol.206 , Issue.1 , pp. 71-75
    • Van Hartingsveldt, W.1    Mattern, I.E.2    Van Zeijl, C.M.J.3
  • 45
    • 85009547782 scopus 로고    scopus 로고
    • Transformation system for Aspergillus oryzae with double auxotrophic mutations, niaD and sC
    • 10.1271/bbb.61.1367 1:CAS:528:DyaK2sXlvFequro%3D
    • O Yamada BR Lee K Gomi 1997 Transformation system for Aspergillus oryzae with double auxotrophic mutations, niaD and sC Biosci Biotechnol Biochem 61 1367 1369 10.1271/bbb.61.1367 1:CAS:528:DyaK2sXlvFequro%3D
    • (1997) Biosci Biotechnol Biochem , vol.61 , pp. 1367-1369
    • Yamada, O.1    Lee, B.R.2    Gomi, K.3
  • 46
    • 0036787648 scopus 로고    scopus 로고
    • Minimization of the Escherichia coli genome using a Tn5-targeted Cre/loxP excision system
    • 10.1038/nbt740 1:CAS:528:DC%2BD38XnsVGkt78%3D 12244329
    • BJ Yu BH Sung MD Koob CH Lee JH Lee WS Lee, et al. 2002 Minimization of the Escherichia coli genome using a Tn5-targeted Cre/loxP excision system Nat Biotechnol 20 1018 1102 10.1038/nbt740 1:CAS:528:DC%2BD38XnsVGkt78%3D 12244329
    • (2002) Nat Biotechnol , vol.20 , pp. 1018-1102
    • Yu, B.J.1    Sung, B.H.2    Koob, M.D.3    Lee, C.H.4    Lee, J.H.5    Lee, W.S.6


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