-
1
-
-
0028356158
-
Alu sequences in the coding regions of mRNA: a source of protein variability
-
10.1016/0168-9525(94)90254-2, 8073532
-
Makalowski W, Mitchell GA, Labuda D. Alu sequences in the coding regions of mRNA: a source of protein variability. Trends Genet 1994, 10:188-193. 10.1016/0168-9525(94)90254-2, 8073532.
-
(1994)
Trends Genet
, vol.10
, pp. 188-193
-
-
Makalowski, W.1
Mitchell, G.A.2
Labuda, D.3
-
2
-
-
2442687890
-
Preference of simple sequence repeats in coding and non-coding regions of Arabidopsis thaliana
-
10.1093/bioinformatics/bth043, 14764542
-
Zhang L, Yuan D, Yu S, Li Z, Cao Y, Miao Z, Qian H, Tang K. Preference of simple sequence repeats in coding and non-coding regions of Arabidopsis thaliana. Bioinformatics 2004, 20:1081-1086. 10.1093/bioinformatics/bth043, 14764542.
-
(2004)
Bioinformatics
, vol.20
, pp. 1081-1086
-
-
Zhang, L.1
Yuan, D.2
Yu, S.3
Li, Z.4
Cao, Y.5
Miao, Z.6
Qian, H.7
Tang, K.8
-
3
-
-
0031081111
-
Simple sequence repeats as a source of quantitative genetic variation
-
10.1016/S0168-9525(97)01008-1, 9055609
-
Kashi Y, King D, Soller M. Simple sequence repeats as a source of quantitative genetic variation. Trends Genet 1997, 13:74-78. 10.1016/S0168-9525(97)01008-1, 9055609.
-
(1997)
Trends Genet
, vol.13
, pp. 74-78
-
-
Kashi, Y.1
King, D.2
Soller, M.3
-
4
-
-
58149182901
-
Amino acid repeats and the structure and evolution of proteins
-
full_text, 18753788
-
Alba MM, Tompa P, Veitia RA. Amino acid repeats and the structure and evolution of proteins. Genome Dyn 2007, 3:119-130. full_text, 18753788.
-
(2007)
Genome Dyn
, vol.3
, pp. 119-130
-
-
Alba, M.M.1
Tompa, P.2
Veitia, R.A.3
-
5
-
-
33645763269
-
DNA sequences shaped by selection for stability
-
10.1371/journal.pgen.0020022, 1378130, 16518467
-
Ackermann M, Chao L. DNA sequences shaped by selection for stability. PLoS Genet 2006, 2:e22. 10.1371/journal.pgen.0020022, 1378130, 16518467.
-
(2006)
PLoS Genet
, vol.2
-
-
Ackermann, M.1
Chao, L.2
-
6
-
-
57849143868
-
Hypermutability of genes in Homo sapiens due to the hosting of long mono-SSR
-
10.1093/molbev/msn230, 18845548
-
Loire E, Praz F, Higuet D, Netter P, Achaz G. Hypermutability of genes in Homo sapiens due to the hosting of long mono-SSR. Mol Biol Evol 2009, 26:111-121. 10.1093/molbev/msn230, 18845548.
-
(2009)
Mol Biol Evol
, vol.26
, pp. 111-121
-
-
Loire, E.1
Praz, F.2
Higuet, D.3
Netter, P.4
Achaz, G.5
-
7
-
-
33846844726
-
Highly constrained proteins contain an unexpectedly large number of amino acid tandem repeats
-
10.1016/j.ygeno.2006.11.011, 17196365
-
Mularoni L, Veitia RA, Alba MM. Highly constrained proteins contain an unexpectedly large number of amino acid tandem repeats. Genomics 2007, 89:316-325. 10.1016/j.ygeno.2006.11.011, 17196365.
-
(2007)
Genomics
, vol.89
, pp. 316-325
-
-
Mularoni, L.1
Veitia, R.A.2
Alba, M.M.3
-
8
-
-
0035201633
-
The intrinsically unstable life of DNA triplet repeats associated with human hereditary disorders
-
full_text, 11051764
-
Bowater RP, Wells RD. The intrinsically unstable life of DNA triplet repeats associated with human hereditary disorders. Prog Nucleic Acid Res Mol Biol 2001, 66:159-202. full_text, 11051764.
-
(2001)
Prog Nucleic Acid Res Mol Biol
, vol.66
, pp. 159-202
-
-
Bowater, R.P.1
Wells, R.D.2
-
9
-
-
33750701489
-
FG-rich repeats of nuclear pore proteins form a three-dimensional meshwork with hydrogel-like properties
-
10.1126/science.1132516, 17082456
-
Frey S, Richter RP, Gorlich D. FG-rich repeats of nuclear pore proteins form a three-dimensional meshwork with hydrogel-like properties. Science 2006, 314:815-817. 10.1126/science.1132516, 17082456.
-
(2006)
Science
, vol.314
, pp. 815-817
-
-
Frey, S.1
Richter, R.P.2
Gorlich, D.3
-
10
-
-
36549003965
-
InterPro and InterProScan: tools for protein sequence classification and comparison
-
full_text, 18025686
-
Mulder N, Apweiler R. InterPro and InterProScan: tools for protein sequence classification and comparison. Methods Mol Biol 2007, 396:59-70. full_text, 18025686.
-
(2007)
Methods Mol Biol
, vol.396
, pp. 59-70
-
-
Mulder, N.1
Apweiler, R.2
-
11
-
-
0035783061
-
Protein repeats: structures, functions, and evolution
-
10.1006/jsbi.2001.4392, 11551174
-
Andrade MA, Perez-Iratxeta C, Ponting CP. Protein repeats: structures, functions, and evolution. J Struct Biol 2001, 134:117-131. 10.1006/jsbi.2001.4392, 11551174.
-
(2001)
J Struct Biol
, vol.134
, pp. 117-131
-
-
Andrade, M.A.1
Perez-Iratxeta, C.2
Ponting, C.P.3
-
12
-
-
1242298610
-
Adhesion of outer membrane proteins containing tandem repeats of Anaplasma and Ehrlichia species (Rickettsiales: Anaplasmataceae) to tick cells
-
10.1016/j.vetmic.2003.11.001, 15036540
-
de la Fuente J, Garcia-Garcia JC, Barbet AF, Blouin EF, Kocan KM. Adhesion of outer membrane proteins containing tandem repeats of Anaplasma and Ehrlichia species (Rickettsiales: Anaplasmataceae) to tick cells. Vet Microbiol 2004, 98:313-322. 10.1016/j.vetmic.2003.11.001, 15036540.
-
(2004)
Vet Microbiol
, vol.98
, pp. 313-322
-
-
de la Fuente, J.1
Garcia-Garcia, J.C.2
Barbet, A.F.3
Blouin, E.F.4
Kocan, K.M.5
-
13
-
-
33746962182
-
EVEREST: automatic identification and classification of protein domains in all protein sequences
-
10.1186/1471-2105-7-277, 1533870, 16749920
-
Portugaly E, Harel A, Linial N, Linial M. EVEREST: automatic identification and classification of protein domains in all protein sequences. BMC Bioinformatics 2006, 7:277. 10.1186/1471-2105-7-277, 1533870, 16749920.
-
(2006)
BMC Bioinformatics
, vol.7
, pp. 277
-
-
Portugaly, E.1
Harel, A.2
Linial, N.3
Linial, M.4
-
14
-
-
0033919542
-
Amino acid repeat patterns in protein sequences: their diversity and structural-functional implications
-
10.1110/ps.9.6.1203, 2144659, 10892812
-
Katti MV, Sami-Subbu R, Ranjekar PK, Gupta VS. Amino acid repeat patterns in protein sequences: their diversity and structural-functional implications. Protein Sci 2000, 9:1203-1209. 10.1110/ps.9.6.1203, 2144659, 10892812.
-
(2000)
Protein Sci
, vol.9
, pp. 1203-1209
-
-
Katti, M.V.1
Sami-Subbu, R.2
Ranjekar, P.K.3
Gupta, V.S.4
-
15
-
-
0032104544
-
Detection of internal repeats: how common are they?
-
10.1016/S0959-440X(98)80068-7, 9666330
-
Heringa J. Detection of internal repeats: how common are they?. Curr Opin Struct Biol 1998, 8:338-345. 10.1016/S0959-440X(98)80068-7, 9666330.
-
(1998)
Curr Opin Struct Biol
, vol.8
, pp. 338-345
-
-
Heringa, J.1
-
16
-
-
0034333196
-
Rapid automatic detection and alignment of repeats in protein sequences
-
10.1002/1097-0134(20001101)41:2<224::AID-PROT70>3.0.CO;2-Z, 10966575
-
Heger A, Holm L. Rapid automatic detection and alignment of repeats in protein sequences. Proteins 2000, 41:224-237. 10.1002/1097-0134(20001101)41:2<224::AID-PROT70>3.0.CO;2-Z, 10966575.
-
(2000)
Proteins
, vol.41
, pp. 224-237
-
-
Heger, A.1
Holm, L.2
-
17
-
-
40749144066
-
De novo identification of highly diverged protein repeats by probabilistic consistency
-
10.1093/bioinformatics/btn039, 18245125
-
Biegert A, Soding J. De novo identification of highly diverged protein repeats by probabilistic consistency. Bioinformatics 2008, 24:807-814. 10.1093/bioinformatics/btn039, 18245125.
-
(2008)
Bioinformatics
, vol.24
, pp. 807-814
-
-
Biegert, A.1
Soding, J.2
-
18
-
-
23144450570
-
REPPER--repeats and their periodicities in fibrous proteins
-
10.1093/nar/gki405, 1160166, 15980460
-
Gruber M, Soding J, Lupas AN. REPPER--repeats and their periodicities in fibrous proteins. Nucleic Acids Res 2005, 33:W239-243. 10.1093/nar/gki405, 1160166, 15980460.
-
(2005)
Nucleic Acids Res
, vol.33
-
-
Gruber, M.1
Soding, J.2
Lupas, A.N.3
-
19
-
-
33846611978
-
TPRpred: a tool for prediction of TPR-, PPR- and SEL1-like repeats from protein sequences
-
10.1186/1471-2105-8-2, 1774580, 17199898
-
Karpenahalli MR, Lupas AN, Soding J. TPRpred: a tool for prediction of TPR-, PPR- and SEL1-like repeats from protein sequences. BMC Bioinformatics 2007, 8:2. 10.1186/1471-2105-8-2, 1774580, 17199898.
-
(2007)
BMC Bioinformatics
, vol.8
, pp. 2
-
-
Karpenahalli, M.R.1
Lupas, A.N.2
Soding, J.3
-
20
-
-
40749102414
-
XSTREAM: a practical algorithm for identification and architecture modeling of tandem repeats in protein sequences
-
10.1186/1471-2105-8-382, 2233649, 17931424
-
Newman AM, Cooper JB. XSTREAM: a practical algorithm for identification and architecture modeling of tandem repeats in protein sequences. BMC Bioinformatics 2007, 8:382. 10.1186/1471-2105-8-382, 2233649, 17931424.
-
(2007)
BMC Bioinformatics
, vol.8
, pp. 382
-
-
Newman, A.M.1
Cooper, J.B.2
-
21
-
-
39149110563
-
The genome of the choanoflagellate Monosiga brevicollis and the origin of metazoans
-
10.1038/nature06617, 2562698, 18273011
-
King N, Westbrook MJ, Young SL, Kuo A, Abedin M, Chapman J, Fairclough S, Hellsten U, Isogai Y, Letunic I, et al. The genome of the choanoflagellate Monosiga brevicollis and the origin of metazoans. Nature 2008, 451:783-788. 10.1038/nature06617, 2562698, 18273011.
-
(2008)
Nature
, vol.451
, pp. 783-788
-
-
King, N.1
Westbrook, M.J.2
Young, S.L.3
Kuo, A.4
Abedin, M.5
Chapman, J.6
Fairclough, S.7
Hellsten, U.8
Isogai, Y.9
Letunic, I.10
-
22
-
-
34447300950
-
Sea anemone genome reveals ancestral eumetazoan gene repertoire and genomic organization
-
10.1126/science.1139158, 17615350
-
Putnam NH, Srivastava M, Hellsten U, Dirks B, Chapman J, Salamov A, Terry A, Shapiro H, Lindquist E, Kapitonov VV, et al. Sea anemone genome reveals ancestral eumetazoan gene repertoire and genomic organization. Science 2007, 317:86-94. 10.1126/science.1139158, 17615350.
-
(2007)
Science
, vol.317
, pp. 86-94
-
-
Putnam, N.H.1
Srivastava, M.2
Hellsten, U.3
Dirks, B.4
Chapman, J.5
Salamov, A.6
Terry, A.7
Shapiro, H.8
Lindquist, E.9
Kapitonov, V.V.10
-
23
-
-
0035802409
-
Contribution of sponge genes to unravel the genome of the hypothetical ancestor of Metazoa (Urmetazoa)
-
10.1016/S0378-1119(01)00669-2, 11591483
-
Muller WE, Schroder HC, Skorokhod A, Bunz C, Muller IM, Grebenjuk VA. Contribution of sponge genes to unravel the genome of the hypothetical ancestor of Metazoa (Urmetazoa). Gene 2001, 276:161-173. 10.1016/S0378-1119(01)00669-2, 11591483.
-
(2001)
Gene
, vol.276
, pp. 161-173
-
-
Muller, W.E.1
Schroder, H.C.2
Skorokhod, A.3
Bunz, C.4
Muller, I.M.5
Grebenjuk, V.A.6
-
24
-
-
34249746341
-
Molecular phylogenetics in Hydra, a classical model in evolutionary developmental biology
-
10.1016/j.ympev.2006.10.031, 17174108
-
Hemmrich G, Anokhin B, Zacharias H, Bosch TC. Molecular phylogenetics in Hydra, a classical model in evolutionary developmental biology. Mol Phylogenet Evol 2007, 44:281-290. 10.1016/j.ympev.2006.10.031, 17174108.
-
(2007)
Mol Phylogenet Evol
, vol.44
, pp. 281-290
-
-
Hemmrich, G.1
Anokhin, B.2
Zacharias, H.3
Bosch, T.C.4
-
25
-
-
65249099546
-
Phylogenomics revives traditional views on deep animal relationships
-
10.1016/j.cub.2009.02.052, 19345102
-
Philippe H, Derelle R, Lopez P, Pick K, Borchiellini C, Boury-Esnault N, Vacelet J, Renard E, Houliston E, Queinnec E, et al. Phylogenomics revives traditional views on deep animal relationships. Curr Biol 2009, 19:706-712. 10.1016/j.cub.2009.02.052, 19345102.
-
(2009)
Curr Biol
, vol.19
, pp. 706-712
-
-
Philippe, H.1
Derelle, R.2
Lopez, P.3
Pick, K.4
Borchiellini, C.5
Boury-Esnault, N.6
Vacelet, J.7
Renard, E.8
Houliston, E.9
Queinnec, E.10
-
26
-
-
14344266019
-
Rising starlet: the starlet sea anemone, Nematostella vectensis
-
10.1002/bies.20181, 15666346
-
Darling JA, Reitzel AR, Burton PM, Mazza ME, Ryan JF, Sullivan JC, Finnerty JR. Rising starlet: the starlet sea anemone, Nematostella vectensis. Bioessays 2005, 27:211-221. 10.1002/bies.20181, 15666346.
-
(2005)
Bioessays
, vol.27
, pp. 211-221
-
-
Darling, J.A.1
Reitzel, A.R.2
Burton, P.M.3
Mazza, M.E.4
Ryan, J.F.5
Sullivan, J.C.6
Finnerty, J.R.7
-
27
-
-
1842717956
-
Occurrence and consequences of coding sequence insertions and deletions in Mammalian genomes
-
10.1101/gr.1977804, 383299, 15059996
-
Taylor MS, Ponting CP, Copley RR. Occurrence and consequences of coding sequence insertions and deletions in Mammalian genomes. Genome Res 2004, 14:555-566. 10.1101/gr.1977804, 383299, 15059996.
-
(2004)
Genome Res
, vol.14
, pp. 555-566
-
-
Taylor, M.S.1
Ponting, C.P.2
Copley, R.R.3
-
28
-
-
0345107239
-
Selection in the evolution of gene duplications
-
10.1186/gb-2002-3-2-research0008, 65685, 11864370
-
Kondrashov FA, Rogozin IB, Wolf YI, Koonin EV. Selection in the evolution of gene duplications. Genome Biol 2002, 3:RESEARCH0008. 10.1186/gb-2002-3-2-research0008, 65685, 11864370.
-
(2002)
Genome Biol
, vol.3
-
-
Kondrashov, F.A.1
Rogozin, I.B.2
Wolf, Y.I.3
Koonin, E.V.4
-
29
-
-
74549182933
-
DOE Joint Genome Institute
-
Nematostella
-
Nematostella DOE Joint Genome Institute. 2002, Nematostella., http://www.jgi.doe.gov/genome-projects
-
(2002)
-
-
-
30
-
-
33644876020
-
Pfam: clans, web tools and services
-
10.1093/nar/gkj149, 1347511, 16381856
-
Finn RD, Mistry J, Schuster-Bockler B, Griffiths-Jones S, Hollich V, Lassmann T, Moxon S, Marshall M, Khanna A, Durbin R, et al. Pfam: clans, web tools and services. Nucleic Acids Res 2006, 34:D247-251. 10.1093/nar/gkj149, 1347511, 16381856.
-
(2006)
Nucleic Acids Res
, vol.34
-
-
Finn, R.D.1
Mistry, J.2
Schuster-Bockler, B.3
Griffiths-Jones, S.4
Hollich, V.5
Lassmann, T.6
Moxon, S.7
Marshall, M.8
Khanna, A.9
Durbin, R.10
-
31
-
-
54549127139
-
Comparative genomics and molecular dynamics of DNA repeats in eukaryotes
-
10.1128/MMBR.00011-08, 2593564, 19052325
-
Richard GF, Kerrest A, Dujon B. Comparative genomics and molecular dynamics of DNA repeats in eukaryotes. Microbiol Mol Biol Rev 2008, 72:686-727. 10.1128/MMBR.00011-08, 2593564, 19052325.
-
(2008)
Microbiol Mol Biol Rev
, vol.72
, pp. 686-727
-
-
Richard, G.F.1
Kerrest, A.2
Dujon, B.3
-
32
-
-
13444292317
-
Simple sequence repeats in proteins and their significance for network evolution
-
10.1016/j.gene.2004.11.023, 15716087
-
Hancock JM, Simon M. Simple sequence repeats in proteins and their significance for network evolution. Gene 2005, 345:113-118. 10.1016/j.gene.2004.11.023, 15716087.
-
(2005)
Gene
, vol.345
, pp. 113-118
-
-
Hancock, J.M.1
Simon, M.2
-
33
-
-
0033569354
-
A census of protein repeats
-
10.1006/jmbi.1999.3136, 10512723
-
Marcotte EM, Pellegrini M, Yeates TO, Eisenberg D. A census of protein repeats. J Mol Biol 1999, 293:151-160. 10.1006/jmbi.1999.3136, 10512723.
-
(1999)
J Mol Biol
, vol.293
, pp. 151-160
-
-
Marcotte, E.M.1
Pellegrini, M.2
Yeates, T.O.3
Eisenberg, D.4
-
34
-
-
19944384937
-
Phylogenetic differences in content and intensity of periodic proteins
-
10.1007/s00239-004-0189-2, 15883880
-
Gatherer D, McEwan NR. Phylogenetic differences in content and intensity of periodic proteins. J Mol Evol 2005, 60:447-461. 10.1007/s00239-004-0189-2, 15883880.
-
(2005)
J Mol Evol
, vol.60
, pp. 447-461
-
-
Gatherer, D.1
McEwan, N.R.2
-
35
-
-
34249719998
-
A first look at ARFome: dual-coding genes in mammalian genomes
-
10.1371/journal.pcbi.0030091, 1868773,1868773, 17511511
-
Chung WY, Wadhawan S, Szklarczyk R, Pond SK, Nekrutenko A. A first look at ARFome: dual-coding genes in mammalian genomes. PLoS Comput Biol 2007, 3:e91. 10.1371/journal.pcbi.0030091, 1868773,1868773, 17511511.
-
(2007)
PLoS Comput Biol
, vol.3
-
-
Chung, W.Y.1
Wadhawan, S.2
Szklarczyk, R.3
Pond, S.K.4
Nekrutenko, A.5
-
36
-
-
0029977911
-
A possible origin of newly-born bacterial genes: significance of GC-rich nonstop frame on antisense strand
-
10.1093/nar/24.21.4249, 146247, 8932380
-
Ikehara K, Amada F, Yoshida S, Mikata Y, Tanaka A. A possible origin of newly-born bacterial genes: significance of GC-rich nonstop frame on antisense strand. Nucleic Acids Res 1996, 24:4249-4255. 10.1093/nar/24.21.4249, 146247, 8932380.
-
(1996)
Nucleic Acids Res
, vol.24
, pp. 4249-4255
-
-
Ikehara, K.1
Amada, F.2
Yoshida, S.3
Mikata, Y.4
Tanaka, A.5
-
37
-
-
36749050344
-
Repeat-protein folding: New insights into origins of cooperativity, stability, and topology
-
10.1016/j.abb.2007.08.034, 2474553, 17963718
-
Kloss E, Courtemanche N, Barrick D. Repeat-protein folding: New insights into origins of cooperativity, stability, and topology. Archives of Biochemistry and Biophysics 2008, 469:83-99. 10.1016/j.abb.2007.08.034, 2474553, 17963718.
-
(2008)
Archives of Biochemistry and Biophysics
, vol.469
, pp. 83-99
-
-
Kloss, E.1
Courtemanche, N.2
Barrick, D.3
-
38
-
-
0037305939
-
Domains, motifs and clusters in the protein universe
-
10.1016/S1367-5931(02)00003-0, 12547420
-
Liu J, Rost B. Domains, motifs and clusters in the protein universe. Curr Opin Chem Biol 2003, 7:5-11. 10.1016/S1367-5931(02)00003-0, 12547420.
-
(2003)
Curr Opin Chem Biol
, vol.7
, pp. 5-11
-
-
Liu, J.1
Rost, B.2
-
39
-
-
48449106792
-
The Jpred 3 secondary structure prediction server
-
10.1093/nar/gkn238, 2447793, 18463136
-
Cole C, Barber JD, Barton GJ. The Jpred 3 secondary structure prediction server. Nucleic Acids Res 2008, 36:W197-201. 10.1093/nar/gkn238, 2447793, 18463136.
-
(2008)
Nucleic Acids Res
, vol.36
-
-
Cole, C.1
Barber, J.D.2
Barton, G.J.3
-
40
-
-
44949165528
-
The energy landscapes of repeat-containing proteins: topology, cooperativity, and the folding funnels of one-dimensional architectures
-
10.1371/journal.pcbi.1000070, 2366061, 18483553
-
Ferreiro DU, Walczak AM, Komives EA, Wolynes PG. The energy landscapes of repeat-containing proteins: topology, cooperativity, and the folding funnels of one-dimensional architectures. PLoS Comput Biol 2008, 4:e1000070. 10.1371/journal.pcbi.1000070, 2366061, 18483553.
-
(2008)
PLoS Comput Biol
, vol.4
-
-
Ferreiro, D.U.1
Walczak, A.M.2
Komives, E.A.3
Wolynes, P.G.4
-
41
-
-
67049164963
-
The structure of the ankyrin-binding site of {beta}-spectrin reveals how tandem spectrin-repeats generate unique ligand-binding properties
-
10.1182/blood-2008-10-184291, 19168783
-
Stabach PR, Simonovic I, Ranieri MA, Aboodi MS, Steitz TA, Simonovic M, Morrow JS. The structure of the ankyrin-binding site of {beta}-spectrin reveals how tandem spectrin-repeats generate unique ligand-binding properties. Blood 2009, 113:5377-5384. 10.1182/blood-2008-10-184291, 19168783.
-
(2009)
Blood
, vol.113
, pp. 5377-5384
-
-
Stabach, P.R.1
Simonovic, I.2
Ranieri, M.A.3
Aboodi, M.S.4
Steitz, T.A.5
Simonovic, M.6
Morrow, J.S.7
-
42
-
-
33644875994
-
StellaBase: the Nematostella vectensis Genomics Database
-
10.1093/nar/gkj020, 1347383, 16381919
-
Sullivan JC, Ryan JF, Watson JA, Webb J, Mullikin JC, Rokhsar D, Finnerty JR. StellaBase: the Nematostella vectensis Genomics Database. Nucleic Acids Res 2006, 34:D495-499. 10.1093/nar/gkj020, 1347383, 16381919.
-
(2006)
Nucleic Acids Res
, vol.34
-
-
Sullivan, J.C.1
Ryan, J.F.2
Watson, J.A.3
Webb, J.4
Mullikin, J.C.5
Rokhsar, D.6
Finnerty, J.R.7
-
43
-
-
0346801873
-
The Gene Ontology (GO) database and informatics resource
-
10.1093/nar/gkh066, 308770, 14681407
-
Harris MA, Clark J, Ireland A, Lomax J, Ashburner M, Foulger R, Eilbeck K, Lewis S, Marshall B, Mungall C, et al. The Gene Ontology (GO) database and informatics resource. Nucleic Acids Res 2004, 32:D258-261. 10.1093/nar/gkh066, 308770, 14681407.
-
(2004)
Nucleic Acids Res
, vol.32
-
-
Harris, M.A.1
Clark, J.2
Ireland, A.3
Lomax, J.4
Ashburner, M.5
Foulger, R.6
Eilbeck, K.7
Lewis, S.8
Marshall, B.9
Mungall, C.10
-
44
-
-
0029880961
-
Gene conversion plays the major role in controlling the stability of large tandem repeats in yeast
-
450084, 8612596
-
Gangloff S, Zou H, Rothstein R. Gene conversion plays the major role in controlling the stability of large tandem repeats in yeast. EMBO J 1996, 15:1715-1725. 450084, 8612596.
-
(1996)
EMBO J
, vol.15
, pp. 1715-1725
-
-
Gangloff, S.1
Zou, H.2
Rothstein, R.3
-
45
-
-
25144494777
-
Intragenic tandem repeats generate functional variability
-
10.1038/ng1618, 1462868, 16086015
-
Verstrepen KJ, Jansen A, Lewitter F, Fink GR. Intragenic tandem repeats generate functional variability. Nat Genet 2005, 37:986-990. 10.1038/ng1618, 1462868, 16086015.
-
(2005)
Nat Genet
, vol.37
, pp. 986-990
-
-
Verstrepen, K.J.1
Jansen, A.2
Lewitter, F.3
Fink, G.R.4
-
46
-
-
18244373484
-
Evidence of positive selection acting at the human dopamine receptor D4 gene locus
-
10.1073/pnas.012464099, 117557, 11756666
-
Ding YC, Chi HC, Grady DL, Morishima A, Kidd JR, Kidd KK, Flodman P, Spence MA, Schuck S, Swanson JM, et al. Evidence of positive selection acting at the human dopamine receptor D4 gene locus. Proc Natl Acad Sci USA 2002, 99:309-314. 10.1073/pnas.012464099, 117557, 11756666.
-
(2002)
Proc Natl Acad Sci USA
, vol.99
, pp. 309-314
-
-
Ding, Y.C.1
Chi, H.C.2
Grady, D.L.3
Morishima, A.4
Kidd, J.R.5
Kidd, K.K.6
Flodman, P.7
Spence, M.A.8
Schuck, S.9
Swanson, J.M.10
-
47
-
-
33644873213
-
The Universal Protein Resource (UniProt): an expanding universe of protein information
-
10.1093/nar/gkj161, 1347523, 16381842
-
Wu CH, Apweiler R, Bairoch A, Natale DA, Barker WC, Boeckmann B, Ferro S, Gasteiger E, Huang H, Lopez R, et al. The Universal Protein Resource (UniProt): an expanding universe of protein information. Nucleic Acids Res 2006, 34:D187-191. 10.1093/nar/gkj161, 1347523, 16381842.
-
(2006)
Nucleic Acids Res
, vol.34
-
-
Wu, C.H.1
Apweiler, R.2
Bairoch, A.3
Natale, D.A.4
Barker, W.C.5
Boeckmann, B.6
Ferro, S.7
Gasteiger, E.8
Huang, H.9
Lopez, R.10
-
48
-
-
38549176691
-
Ensembl 2008
-
10.1093/nar/gkm988, 2238821, 18000006
-
Flicek P, Aken BL, Beal K, Ballester B, Caccamo M, Chen Y, Clarke L, Coates G, Cunningham F, Cutts T, et al. Ensembl 2008. Nucleic Acids Res 2008, 36:D707-714. 10.1093/nar/gkm988, 2238821, 18000006.
-
(2008)
Nucleic Acids Res
, vol.36
-
-
Flicek, P.1
Aken, B.L.2
Beal, K.3
Ballester, B.4
Caccamo, M.5
Chen, Y.6
Clarke, L.7
Coates, G.8
Cunningham, F.9
Cutts, T.10
-
49
-
-
3242876311
-
BLAST: at the core of a powerful and diverse set of sequence analysis tools
-
10.1093/nar/gkh435, 441573, 15215342
-
McGinnis S, Madden TL. BLAST: at the core of a powerful and diverse set of sequence analysis tools. Nucleic Acids Res 2004, 32:W20-25. 10.1093/nar/gkh435, 441573, 15215342.
-
(2004)
Nucleic Acids Res
, vol.32
-
-
McGinnis, S.1
Madden, T.L.2
-
50
-
-
34248669040
-
KaKs_Calculator: calculating Ka and Ks through model selection and model averaging
-
10.1016/S1672-0229(07)60007-2, 17531802
-
Zhang Z, Li J, Zhao XQ, Wang J, Wong GK, Yu J. KaKs_Calculator: calculating Ka and Ks through model selection and model averaging. Genomics Proteomics Bioinformatics 2006, 4:259-263. 10.1016/S1672-0229(07)60007-2, 17531802.
-
(2006)
Genomics Proteomics Bioinformatics
, vol.4
, pp. 259-263
-
-
Zhang, Z.1
Li, J.2
Zhao, X.Q.3
Wang, J.4
Wong, G.K.5
Yu, J.6
-
51
-
-
34447539760
-
Composition Profiler: a tool for discovery and visualization of amino acid composition differences
-
10.1186/1471-2105-8-211, 1914087, 17578581
-
Vacic V, Uversky VN, Dunker AK, Lonardi S. Composition Profiler: a tool for discovery and visualization of amino acid composition differences. BMC Bioinformatics 2007, 8:211. 10.1186/1471-2105-8-211, 1914087, 17578581.
-
(2007)
BMC Bioinformatics
, vol.8
, pp. 211
-
-
Vacic, V.1
Uversky, V.N.2
Dunker, A.K.3
Lonardi, S.4
-
52
-
-
0035022941
-
Intrinsically disordered protein
-
10.1016/S1093-3263(00)00138-8, 11381529
-
Dunker AK, Lawson JD, Brown CJ, Williams RM, Romero P, Oh JS, Oldfield CJ, Campen AM, Ratliff CM, Hipps KW, et al. Intrinsically disordered protein. J Mol Graph Model 2001, 19:26-59. 10.1016/S1093-3263(00)00138-8, 11381529.
-
(2001)
J Mol Graph Model
, vol.19
, pp. 26-59
-
-
Dunker, A.K.1
Lawson, J.D.2
Brown, C.J.3
Williams, R.M.4
Romero, P.5
Oh, J.S.6
Oldfield, C.J.7
Campen, A.M.8
Ratliff, C.M.9
Hipps, K.W.10
|