-
1
-
-
0035397522
-
Information geometry on hierarchy of probability distributions
-
Amari, S. I. (2001). Information geometry on hierarchy of probability distributions. IEEE Trans. Inf. Theory 47, 1701-1711.
-
(2001)
IEEE Trans. Inf. Theory
, vol.47
, pp. 1701-1711
-
-
Amari, S.I.1
-
2
-
-
3042801119
-
Whisker vibration information carried by rat barrel cortex neurons
-
Arabzadeh, E., Panzeri, S., and Diamond, M. E. (2004). Whisker vibration information carried by rat barrel cortex neurons. J. Neurosci. 24, 6011-6020.
-
(2004)
J. Neurosci
, vol.24
, pp. 6011-6020
-
-
Arabzadeh, E.1
Panzeri, S.2
Diamond, M.E.3
-
3
-
-
33745726849
-
Neural correlations, population coding and computation
-
Averbeck, B. B., Latham, P. E., and Pouget, A. (2006). Neural correlations, population coding and computation. Nat. Rev. Neurosci. 7, 358-367.
-
(2006)
Nat. Rev. Neurosci
, vol.7
, pp. 358-367
-
-
Averbeck, B.B.1
Latham, P.E.2
Pouget, A.3
-
4
-
-
45949095994
-
Low-frequency local field potentials and spikes in primary visual cortex convey independent visual information
-
Belitski, A., Gretton, A., Magri, C., Marayama, Y., Montemurro, M. A., Logothetis, N. K., and Panzeri, S. (2008). Low-frequency local field potentials and spikes in primary visual cortex convey independent visual information. J. Neurosci. 28, 5696-5709.
-
(2008)
J. Neurosci
, vol.28
, pp. 5696-5709
-
-
Belitski, A.1
Gretton, A.2
Magri, C.3
Marayama, Y.4
Montemurro, M.A.5
Logothetis, N.K.6
Panzeri, S.7
-
5
-
-
0033334496
-
Information theory and neural coding
-
Borst, A., and Theunissen, F. E. (1999). Information theory and neural coding. Nat. Neurosci. 2, 947-957.
-
(1999)
Nat. Neurosci
, vol.2
, pp. 947-957
-
-
Borst, A.1
Theunissen, F.E.2
-
6
-
-
84889281816
-
-
2nd Edn. Hoboken, NJ, John Wiley & Sons
-
Cover, T. M., and Thomas, J. A. (2006). Elements of Information Theory, 2nd Edn. Hoboken, NJ, John Wiley & Sons.
-
(2006)
Elements of Information Theory
-
-
Cover, T.M.1
Thomas, J.A.2
-
7
-
-
33644692887
-
Coding of visual information by precisely correlated spikes in the lateral geniculate nucleus
-
Dan, Y., Alonso, J. M., Usrey, W. M., and Reid, R. C. (1998). Coding of visual information by precisely correlated spikes in the lateral geniculate nucleus. Nat. Neurosci. 1, 501-507.
-
(1998)
Nat. Neurosci
, vol.1
, pp. 501-507
-
-
Dan, Y.1
Alonso, J.M.2
Usrey, W.M.3
Reid, R.C.4
-
8
-
-
2942653250
-
Algorithm 832: UMFPACK V4. 3 - An unsymmetric-pattern multifrontal method
-
Davis, T. A. (2004). Algorithm 832: UMFPACK V4. 3 - An unsymmetric-pattern multifrontal method. ACM Trans. Math. Soft. 30, 196-199.
-
(2004)
ACM Trans. Math. Soft
, vol.30
, pp. 196-199
-
-
Davis, T.A.1
-
9
-
-
0030938069
-
Reproducibility and variability in neural spike trains
-
de Ruyter van Steveninck, R., Lewen, G., Strong, S., Koberle, R., and Bialek, W. (1997). Reproducibility and variability in neural spike trains. Science 21, 1805-1808.
-
(1997)
Science
, vol.21
, pp. 1805-1808
-
-
de Ruyter van Steveninck, R.1
Lewen, G.2
Strong, S.3
Koberle, R.4
Bialek, W.5
-
10
-
-
33846650905
-
Spatio-temporal information analysis of event-related BOLD responses
-
Fuhrmann Alpert, G., Sun, F., Handwerker, D., D'Esposito, M., and Knight, R. (2007). Spatio-temporal information analysis of event-related BOLD responses. Neuroimage 34, 1545-1561.
-
(2007)
Neuroimage
, vol.34
, pp. 1545-1561
-
-
Fuhrmann, A.G.1
Sun, F.2
Handwerker, D.3
D'Esposito, M.4
Knight, R.5
-
11
-
-
84856613647
-
The CARMEN Virtual Laboratory: Web- Based Paradigms for Collaboration in Neuroscience
-
Reutlingen, Germany
-
Gibson, F., Austin, J., Ingram, C., Fletcher, M., Jackson, T., Jessop, M., Knowles, A., Liang, B., Lord, P., Pitsilis, G., Periorellis, P., Simonotto, J., Watson, P., and Smith, L. (2008). The CARMEN Virtual Laboratory: Web- Based Paradigms for Collaboration in Neuroscience. 6th International Meeting on Substrate-Integrated Microelectrodes. Reutlingen, Germany.
-
(2008)
6th International Meeting On Substrate-Integrated Microelectrodes
-
-
Gibson, F.1
Austin, J.2
Ingram, C.3
Fletcher, M.4
Jackson, T.5
Jessop, M.6
Knowles, A.7
Liang, B.8
Lord, P.9
Pitsilis, G.10
Periorellis, P.11
Simonotto, J.12
Watson, P.13
Smith, L.14
-
12
-
-
0024514737
-
Oscillatory responses in cat visual cortex exhibit inter-columnar synchronization which refl ects global stimulus properties
-
Gray, C. M., Konig, P., Engel, A. K., and Singer, W. (1989). Oscillatory responses in cat visual cortex exhibit inter-columnar synchronization which refl ects global stimulus properties. Nature 338, 334-337.
-
(1989)
Nature
, vol.338
, pp. 334-337
-
-
Gray, C.M.1
Konig, P.2
Engel, A.K.3
Singer, W.4
-
13
-
-
0032417961
-
Information about movement direction obtained from synchronous activity of motor cortical neurons
-
Hatsopoulos, N. G., Ojakangas, C. L., Paninski, L., and Donoghue, J. P. (1998). Information about movement direction obtained from synchronous activity of motor cortical neurons. Proc. Natl. Acad. Sci. 95, 15706-15711.
-
(1998)
Proc. Natl. Acad. Sci
, vol.95
, pp. 15706-15711
-
-
Hatsopoulos, N.G.1
Ojakangas, C.L.2
Paninski, L.3
Donoghue, J.P.4
-
15
-
-
34547219105
-
Network structure of cerebral cortex shapes functional connectivity on multiple time scales
-
Honey, C. J., Kotter, R., Breakspear, M., and Sporns, O. (2007). Network structure of cerebral cortex shapes functional connectivity on multiple time scales. Proc. Natl. Acad. Sci. 104, 10240-10245.
-
(2007)
Proc. Natl. Acad. Sci
, vol.104
, pp. 10240-10245
-
-
Honey, C.J.1
Kotter, R.2
Breakspear, M.3
Sporns, O.4
-
17
-
-
19544382559
-
Synergy, redundancy, and independence in population codes, revisited
-
Latham, P. E., and Nirenberg, S. (2005). Synergy, redundancy, and independence in population codes, revisited. J. Neurosci. 25, 5195-5206.
-
(2005)
J. Neurosci
, vol.25
, pp. 5195-5206
-
-
Latham, P.E.1
Nirenberg, S.2
-
18
-
-
84890881036
-
-
Preparation
-
Lüdtke, N., Ince, R. A. A., Brown, M., Kell, D. B., and Panzeri, S. (2009). A comparative evaluation of entropy and variance based methods for sensitivity analysis. In Preparation.
-
(2009)
A Comparative Evaluation of Entropy and Variance Based Methods For Sensitivity Analysis
-
-
Lüdtke, N.1
Ince, R.A.A.2
Brown, M.3
Kell, D.B.4
Panzeri, S.5
-
19
-
-
0020698517
-
Correlated firing of cat retinal ganglion cells. I. Spontaneously active inputs to X- and Y-cells
-
Mastronarde, D. N. (1983). Correlated firing of cat retinal ganglion cells. I. Spontaneously active inputs to X- and Y-cells. J. Neurophysiol. 49, 303-324.
-
(1983)
J. Neurophysiol
, vol.49
, pp. 303-324
-
-
Mastronarde, D.N.1
-
20
-
-
0005770331
-
Note on the bias of information estimates
-
H. Quastler, ed. (Glencoe, Ill, Free Press
-
Miller, G. A. (1955). Note on the bias of information estimates. In Information Theory in Psychology: Problems and Methods, H. Quastler, ed. (Glencoe, Ill, Free Press), pp. 95-100.
-
(1955)
Information Theory In Psychology: Problems and Methods
, pp. 95-100
-
-
Miller, G.A.1
-
21
-
-
35348864929
-
Role of precise spike timing in coding of dynamic vibrissa stimuli in somatosensory thalamus
-
Montemurro, M. A., Panzeri, S., Maravall, M., Alenda, A., Bale, M. R., Brambilla, M., and Petersen, R. S. (2007a). Role of precise spike timing in coding of dynamic vibrissa stimuli in somatosensory thalamus. J. Neurophysiol. 98, 1871-1882.
-
(2007)
J. Neurophysiol
, vol.98
, pp. 1871-1882
-
-
Montemurro, M.A.1
Panzeri, S.2
Maravall, M.3
Alenda, A.4
Bale, M.R.5
Brambilla, M.6
Petersen, R.S.7
-
22
-
-
36248960534
-
Tight data-robust bounds to mutual information combining shuffling and model selection techniques
-
Montemurro, M. A., Senatore, R., and Panzeri, S. (2007b). Tight data-robust bounds to mutual information combining shuffling and model selection techniques. Neural Comput. 19, 2913-2957.
-
(2007)
Neural Comput
, vol.19
, pp. 2913-2957
-
-
Montemurro, M.A.1
Senatore, R.2
Panzeri, S.3
-
23
-
-
40349088694
-
Phase-of-firing coding of natural visual stimuli in primary visual cortex
-
Montemurro, M. A., Rasch, M. J., Murayama, Y., Logothetis, N. K., and Panzeri, S. (2008). Phase-of-firing coding of natural visual stimuli in primary visual cortex. Curr. Biol. 18, 375-380.
-
(2008)
Curr. Biol
, vol.18
, pp. 375-380
-
-
Montemurro, M.A.1
Rasch, M.J.2
Murayama, Y.3
Logothetis, N.K.4
Panzeri, S.5
-
25
-
-
42749107407
-
Entropy and information in neural spike trains: Progress on the sampling problem
-
Nemenman, I., Bialek, W., and de Ruyter van Steveninck, R. (2004). Entropy and information in neural spike trains: progress on the sampling problem. Phys. Rev. E 69, 56111.
-
(2004)
Phys. Rev. E
, vol.69
, pp. 56111
-
-
Nemenman, I.1
Bialek, W.2
de Ruyter van Steveninck, R.3
-
26
-
-
84898931392
-
Entropy and inference, revisited
-
Nemenman, I., Shafee, F., and Bialek, W. (2002). Entropy and inference, revisited. Adv. Neural. Inf. Process. Syst. 14, 95-100.
-
(2002)
Adv. Neural. Inf. Process. Syst
, vol.14
, pp. 95-100
-
-
Nemenman, I.1
Shafee, F.2
Bialek, W.3
-
27
-
-
34948851847
-
Analyzing the activity of large populations of neurons: How tractable is the problem?
-
Nirenberg, S., and Victor, J. (2007). Analyzing the activity of large populations of neurons: how tractable is the problem? Curr. Opin. Neurobiol. 17, 397-400.
-
(2007)
Curr. Opin. Neurobiol
, vol.17
, pp. 397-400
-
-
Nirenberg, S.1
Victor, J.2
-
28
-
-
0033594680
-
Correlations and the encoding of information in the nervous system
-
Panzeri, S. (1999). Correlations and the encoding of information in the nervous system. Proc. R. Soc. B 266, 1001-1012.
-
(1999)
Proc. R. Soc. B
, vol.266
, pp. 1001-1012
-
-
Panzeri, S.1
-
29
-
-
48749087223
-
On the use of information theory for the analysis of the relationship between neural and imaging signals
-
Panzeri, S., Magri, C., and Logothetis, N. (2008). On the use of information theory for the analysis of the relationship between neural and imaging signals. Magn. Reson. Imaging 26, 1015-1025.
-
(2008)
Magn. Reson. Imaging
, vol.26
, pp. 1015-1025
-
-
Panzeri, S.1
Magri, C.2
Logothetis, N.3
-
30
-
-
0035052392
-
The role of spike timing in the coding of stimulus location in rat somatosensory cortex
-
Panzeri, S., Petersen, R., Schultz, S., Lebedev, M., and Diamond, M. (2001). The role of spike timing in the coding of stimulus location in rat somatosensory cortex. Neuron 29, 769-777.
-
(2001)
Neuron
, vol.29
, pp. 769-777
-
-
Panzeri, S.1
Petersen, R.2
Schultz, S.3
Lebedev, M.4
Diamond, M.5
-
31
-
-
34548790687
-
Correcting for the sampling bias problem in spike train information measures
-
Panzeri, S., Senatore, R., Montemurro, M., and Petersen, R. (2007). Correcting for the sampling bias problem in spike train information measures. J. Neurophysiol. 98, 1064-1072.
-
(2007)
J. Neurophysiol
, vol.98
, pp. 1064-1072
-
-
Panzeri, S.1
Senatore, R.2
Montemurro, M.3
Petersen, R.4
-
32
-
-
84866067617
-
Analytical estimates of limited sampling biases in different information measures
-
Panzeri, S., and Treves, A. (1996). Analytical estimates of limited sampling biases in different information measures. Netw. Comput. Neural Syst. 7, 87-107.
-
(1996)
Netw. Comput. Neural Syst
, vol.7
, pp. 87-107
-
-
Panzeri, S.1
Treves, A.2
-
33
-
-
34247481878
-
Ipython: A system for interactive scientific computing
-
Perez, F., and Granger, B. (2007). Ipython: a system for interactive scientific computing. Comput. Sci. Eng. 9, 21-29.
-
(2007)
Comput. Sci. Eng
, vol.9
, pp. 21-29
-
-
Perez, F.1
Granger, B.2
-
34
-
-
57149122475
-
Diverse and temporally precise kinetic feature selectivity in the VPm thalamic nucleus
-
Petersen, R., Brambilla, M., Bale, M., Alenda, A., Panzeri, S., Montemurro, M., and Maravall, M. (2008). Diverse and temporally precise kinetic feature selectivity in the VPm thalamic nucleus. Neuron 60, 890-903.
-
(2008)
Neuron
, vol.60
, pp. 890-903
-
-
Petersen, R.1
Brambilla, M.2
Bale, M.3
Alenda, A.4
Panzeri, S.5
Montemurro, M.6
Maravall, M.7
-
35
-
-
0035829717
-
Population coding of stimulus location in rat somatosensory cortex
-
Petersen, R., Panzeri, S., and Diamond, M. (2001). Population coding of stimulus location in rat somatosensory cortex. Neuron 32, 503-514.
-
(2001)
Neuron
, vol.32
, pp. 503-514
-
-
Petersen, R.1
Panzeri, S.2
Diamond, M.3
-
36
-
-
0347423196
-
An exact method to quantify the information transmitted by different mechanisms of correlational coding
-
Pola, G., Thiele, A., Hoffmann, K., and Panzeri, S. (2003). An exact method to quantify the information transmitted by different mechanisms of correlational coding. Netw. Comput. Neural Syst. 14, 35-60.
-
(2003)
Netw. Comput. Neural Syst
, vol.14
, pp. 35-60
-
-
Pola, G.1
Thiele, A.2
Hoffmann, K.3
Panzeri, S.4
-
37
-
-
0003634127
-
-
Bradford Book. Cambridge, MA, MIT Press
-
Rieke, F., Bialek, W., Warland, D., and Van Steveninck, R. (1999). Spikes: Exploring the Neural Code. Bradford Book. Cambridge, MA, MIT Press.
-
(1999)
Spikes: Exploring the Neural Code
-
-
Rieke, F.1
Bialek, W.2
Warland, D.3
van Steveninck, R.4
-
38
-
-
33845256430
-
Propagating waves mediate information transfer in the motor cortex
-
Rubino, D., Robbins, K., and Hatsopoulos, N. (2006). Propagating waves mediate information transfer in the motor cortex. Nat. Neurosci. 9, 1549-1557.
-
(2006)
Nat. Neurosci
, vol.9
, pp. 1549-1557
-
-
Rubino, D.1
Robbins, K.2
Hatsopoulos, N.3
-
39
-
-
33646170322
-
Weak pairwise correlations imply strongly correlated network states in a neural population
-
Schneidman, E., Berry, M., II, Segev, R., and Bialek, W. (2006). Weak pairwise correlations imply strongly correlated network states in a neural population. Nature 440, 1007-1012.
-
(2006)
Nature
, vol.440
, pp. 1007-1012
-
-
Schneidman, E.1
Berry II, M.2
Segev, R.3
Bialek, W.4
-
40
-
-
0347447273
-
Network information and connected correlations
-
Schneidman, E., Still, S., Berry, M., and Bialek, W. (2003). Network information and connected correlations. Phys. Rev. Lett. 91, 238701.
-
(2003)
Phys. Rev. Lett
, vol.91
, pp. 238701
-
-
Schneidman, E.1
Still, S.2
Berry, M.3
Bialek, W.4
-
41
-
-
0040973114
-
Entropy estimation of symbol sequences
-
Schürmann, T., and Grassberger, P. (1996). Entropy estimation of symbol sequences. Chaos. 6, 414-427.
-
(1996)
Chaos
, vol.6
, pp. 414-427
-
-
Schürmann, T.1
Grassberger, P.2
-
42
-
-
84856043672
-
A mathematical theory of communication
-
Shannon, C. (1948). A mathematical theory of communication. Bell Syst. Tech. J. 27, 379-423.
-
(1948)
Bell Syst. Tech. J
, vol.27
, pp. 379-423
-
-
Shannon, C.1
-
43
-
-
33748175149
-
The structure of multi-neuron firing patterns in primate retina
-
Shlens, J., Field, G., Gauthier, J., Grivich, M., Petrusca, D., Sher, A., Litke, A., and Chichilnisky, E. (2006). The structure of multi-neuron firing patterns in primate retina. J. Neurosci. 26, 8254.
-
(2006)
J. Neurosci
, vol.26
, pp. 8254
-
-
Shlens, J.1
Field, G.2
Gauthier, J.3
Grivich, M.4
Petrusca, D.5
Sher, A.6
Litke, A.7
Chichilnisky, E.8
-
44
-
-
0000989527
-
Entropy and information in neural spike trains
-
Strong, S., Koberle, R., de Ruyter van Steveninck, R., and Bialek, W. (1998). Entropy and information in neural spike trains. Phys. Rev. Lett. 80, 197-200.
-
(1998)
Phys. Rev. Lett
, vol.80
, pp. 197-200
-
-
Strong, S.1
Koberle, R.2
de Ruyter van Steveninck, R.3
Bialek, W.4
-
45
-
-
38349042222
-
A maximum entropy model applied to spatial and temporal correlations from cortical networks in vitro
-
Tang, A., Jackson, D., Hobbs, J., Chen, W., Smith, J. L., Patel, H., Prieto, A., Petrusca, D., Grivich, M. I., Sher, A., Hottowy, P., Dabrowski, W., Litke, A. M., and Beggs, J. M. (2008). A maximum entropy model applied to spatial and temporal correlations from cortical networks in vitro. J. Neurosci. 28, 505-518.
-
(2008)
J. Neurosci
, vol.28
, pp. 505-518
-
-
Tang, A.1
Jackson, D.2
Hobbs, J.3
Chen, W.4
Smith, J.L.5
Patel, H.6
Prieto, A.7
Petrusca, D.8
Grivich, M.I.9
Sher, A.10
Hottowy, P.11
Dabrowski, W.12
Litke, A.M.13
Beggs, J.M.14
-
46
-
-
0001065513
-
The upward bias in measures of information derived from limited data samples
-
Treves, A., and Panzeri, S. (1995). The upward bias in measures of information derived from limited data samples. Neural Comput. 7, 399-407.
-
(1995)
Neural Comput
, vol.7
, pp. 399-407
-
-
Treves, A.1
Panzeri, S.2
-
48
-
-
0037937825
-
Temporal aspects of neural coding in the retina and lateral geniculate
-
Victor, J. (1999). Temporal aspects of neural coding in the retina and lateral geniculate. Netw. Comput. Neural Syst. 10, 1-66.
-
(1999)
Netw. Comput. Neural Syst
, vol.10
, pp. 1-66
-
-
Victor, J.1
-
49
-
-
38649136181
-
Approaches to information-theoretic analysis of neural activity
-
Victor, J. (2006). Approaches to information-theoretic analysis of neural activity. Biol. Theory 1, 302-316.
-
(2006)
Biol. Theory
, vol.1
, pp. 302-316
-
-
Victor, J.1
-
50
-
-
38549159364
-
Hand movement direction decoded from MEG and EEG
-
Waldert, S., Preissl, H., Demandt, E., Braun, C., Birbaumer, N., Aertsen, A., and Mehring, C. (2008). Hand movement direction decoded from MEG and EEG. J. Neurosci. 28, 1000-1008.
-
(2008)
J. Neurosci
, vol.28
, pp. 1000-1008
-
-
Waldert, S.1
Preissl, H.2
Demandt, E.3
Braun, C.4
Birbaumer, N.5
Aertsen, A.6
Mehring, C.7
|