메뉴 건너뛰기




Volumn 105, Issue 1, 2010, Pages 109-120

Substrate uptake, phosphorus repression, and effect of seed culture on glycopeptide antibiotic production: Process model development and experimental validation

Author keywords

Amycolatopsis balhimycina; Multi substrate media; Parameter estimation; Structured kinetic model

Indexed keywords

AMYCOLATOPSIS BALHIMYCINA; CATABOLITE REPRESSION; CONFIDENCE INTERVAL; EXPERIMENTAL VALIDATIONS; FEEDING STRATEGIES; FILAMENTOUS GROWTH; GLYCOPEPTIDE ANTIBIOTICS; GLYCOPEPTIDES; INDUSTRIAL-SCALE PRODUCTION; KINETIC MODELS; MEDIUM COMPOSITION; METABOLIC PATHWAYS; MODEL PARAMETERS; MODEL SENSITIVITY; OPERATING CONDITION; PHOSPHATE LEVELS; PREDICTIVE ABILITIES; PROCESS MODEL; PRODUCT FORMATION; RATE-LIMITING ENZYMES; SECONDARY METABOLITES; SEED CULTURES; SEED TRANSFER; SUBSTRATE INHIBITION; SUBSTRATE UPTAKE; UPTAKE RATE;

EID: 73949116960     PISSN: 00063592     EISSN: 10970290     Source Type: Journal    
DOI: 10.1002/bit.22505     Document Type: Article
Times cited : (14)

References (38)
  • 1
    • 0037339233 scopus 로고    scopus 로고
    • Novel antibacterial agents for the treatment of serious Gram-positive infections
    • Abbanat D, Macielag M, Bush K. 2003. Novel antibacterial agents for the treatment of serious Gram-positive infections. Expert Opinion on Investigational Drugs 12(3):379-399.
    • (2003) Expert Opinion on Investigational Drugs , vol.12 , Issue.3 , pp. 379-399
    • Abbanat, D.1    Macielag, M.2    Bush, K.3
  • 2
    • 10344245591 scopus 로고    scopus 로고
    • Recent advances in the treatment of infections due to resistant Staphylococcus aureus
    • Anstead GM, Owens AD. 2004. Recent advances in the treatment of infections due to resistant Staphylococcus aureus. Curr Opin Infect Dis 17(6):549-555.
    • (2004) Curr Opin Infect Dis , vol.17 , Issue.6 , pp. 549-555
    • Anstead, G.M.1    Owens, A.D.2
  • 3
    • 33749028496 scopus 로고
    • Evaluation of feeding strategies in carbon-regulated secondary metabolite production through mathematical modeling
    • Bajpai RK, Reuß M. 1981. Evaluation of feeding strategies in carbon-regulated secondary metabolite production through mathematical modeling. Biotechnol Bioeng 23(4):717-738.
    • (1981) Biotechnol Bioeng , vol.23 , Issue.4 , pp. 717-738
    • Bajpai, R.K.1    Reuß, M.2
  • 4
    • 0030040204 scopus 로고    scopus 로고
    • Dynamics of substrate consumption and enzyme synthesis in Chelatobacter heintzii during growth in carbon-limited continuous culture with different mixtures of glucose and nitrilotriacetate
    • Bally M, Egli T. 1996. Dynamics of substrate consumption and enzyme synthesis in Chelatobacter heintzii during growth in carbon-limited continuous culture with different mixtures of glucose and nitrilotriacetate. Appl Environ Microbiol 62(1):133-140.
    • (1996) Appl Environ Microbiol , vol.62 , Issue.1 , pp. 133-140
    • Bally, M.1    Egli, T.2
  • 5
    • 1842501918 scopus 로고    scopus 로고
    • Optimization of Rifamycin B fermentation in shake flasks via a machine-learning-based approach
    • Bapat PM, Wangikar PP. 2004. Optimization of Rifamycin B fermentation in shake flasks via a machine-learning-based approach. Biotechnol Bioeng 86(2):201-208.
    • (2004) Biotechnol Bioeng , vol.86 , Issue.2 , pp. 201-208
    • Bapat, P.M.1    Wangikar, P.P.2
  • 6
    • 33644913139 scopus 로고    scopus 로고
    • Structured kinetic model to represent the utilization of multiple substrates in complex media during rifamycin B fermentation
    • Bapat PM, Bhartiya S, Venkatesh KV, Wangikar PP. 2006a. Structured kinetic model to represent the utilization of multiple substrates in complex media during rifamycin B fermentation. Biotechnol Bioeng 93(4):779-790.
    • (2006) Biotechnol Bioeng , vol.93 , Issue.4 , pp. 779-790
    • Bapat, P.M.1    Bhartiya, S.2    Venkatesh, K.V.3    Wangikar, P.P.4
  • 7
  • 8
    • 33748991694 scopus 로고    scopus 로고
    • A cybernetic model to predict the effect of freely available nitrogen substrate on rifamycin B production in complex media
    • Bapat PM, Sohoni SV, Moses TA, Wangikar PP. 2006c. A cybernetic model to predict the effect of freely available nitrogen substrate on rifamycin B production in complex media. Appl Microbiol Biotechnol 72(4):662-670.
    • (2006) Appl Microbiol Biotechnol , vol.72 , Issue.4 , pp. 662-670
    • Bapat, P.M.1    Sohoni, S.V.2    Moses, T.A.3    Wangikar, P.P.4
  • 9
    • 0026149630 scopus 로고
    • Calcium and phosphate effects on cell growth and alkaloid production in Coffea arabica
    • Bramble JL, Graves DJ, Brodelius P. 1991. Calcium and phosphate effects on cell growth and alkaloid production in Coffea arabica. Biotechnol Bioeng 37(9):859-868.
    • (1991) Biotechnol Bioeng , vol.37 , Issue.9 , pp. 859-868
    • Bramble, J.L.1    Graves, D.J.2    Brodelius, P.3
  • 10
    • 0030523297 scopus 로고    scopus 로고
    • Kineticmodel for effects of ethanol and phosphate on cell growth and emulsan production in Acinetobacter calcoaceticus RAG-1
    • Choi JW, ChoiHG, Lee SB, LeeWH. 1996. Kineticmodel for effects of ethanol and phosphate on cell growth and emulsan production in Acinetobacter calcoaceticus RAG-1. Korean J Chem Eng 13(3):266-274.
    • (1996) Korean J Chem Eng , vol.13 , Issue.3 , pp. 266-274
    • Choi, J.W.1    Choi, H.G.2    Lee, S.B.3    Lee, W.H.4
  • 11
    • 0021892226 scopus 로고
    • A cybernetic view of microbial-growth - Modeling of cells as optimal strategists
    • Dhurjati P, Ramkrishna D, Flickinger MC, Tsao GT. 1985. A cybernetic view of microbial-growth - Modeling of cells as optimal strategists. Biotechnol Bioeng 27(1):1-9.
    • (1985) Biotechnol Bioeng , vol.27 , Issue.1 , pp. 1-9
    • Dhurjati, P.1    Ramkrishna, D.2    Flickinger, M.C.3    Tsao, G.T.4
  • 12
    • 0030834499 scopus 로고    scopus 로고
    • Modelling of microbial growth for sequential utilization in a multisubstrate environment
    • Doshi P, Rengaswamy R, Venkatesh KV. 1997. Modelling of microbial growth for sequential utilization in a multisubstrate environment. Process Biochem 32(8):643-650.
    • (1997) Process Biochem , vol.32 , Issue.8 , pp. 643-650
    • Doshi, P.1    Rengaswamy, R.2    Venkatesh, K.V.3
  • 13
    • 0031730379 scopus 로고    scopus 로고
    • Carbon catabolite repression of invertase during batch cultivations of Saccharomyces cerevisiae: The role of glucose, fructose, and mannose
    • Dynesen J, Smits HP, Olsson L, Nielsen J. 1998. Carbon catabolite repression of invertase during batch cultivations of Saccharomyces cerevisiae: The role of glucose, fructose, and mannose. Appl Microbiol Biotechnol 50(5):579-582.
    • (1998) Appl Microbiol Biotechnol , vol.50 , Issue.5 , pp. 579-582
    • Dynesen, J.1    Smits, H.P.2    Olsson, L.3    Nielsen, J.4
  • 14
    • 0002344794 scopus 로고
    • Bootstrap methods: Another look at the jackknife
    • Efron B. 1979. Bootstrap methods: Another look at the jackknife. Ann Statist 7(1):1-26.
    • (1979) Ann Statist , vol.7 , Issue.1 , pp. 1-26
    • Efron, B.1
  • 16
    • 15844371621 scopus 로고    scopus 로고
    • Safety and efficacy of glycopeptide antibiotics
    • Finch RG, Eliopoulos GM. 2005. Safety and efficacy of glycopeptide antibiotics. J Antimicrob Chemother 55:5-13.
    • (2005) J Antimicrob Chemother , vol.55 , pp. 5-13
    • Finch, R.G.1    Eliopoulos, G.M.2
  • 17
    • 58149250891 scopus 로고    scopus 로고
    • Kinetic modeling of light limitation and sulfur deprivation effects in the induction of hydrogen production with Chlamydomonas reinhardtii. Part I. Model development and parameter identification
    • Fouchard S, Pruvost J, Degrenne B, Titica M, Legrand J. 2009. Kinetic modeling of light limitation and sulfur deprivation effects in the induction of hydrogen production with Chlamydomonas reinhardtii. Part I. Model development and parameter identification. Biotechnol Bioeng 102(1):232-245.
    • (2009) Biotechnol Bioeng , vol.102 , Issue.1 , pp. 232-245
    • Fouchard, S.1    Pruvost, J.2    Degrenne, B.3    Titica, M.4    Legrand, J.5
  • 18
    • 0025411019 scopus 로고
    • Effect of phosphate on antibiotic and extracellular protein-production by Myxococcus-Coralloides-D
    • Gonzalez F, Montoya MD, Farez E, Arias JM, Montoya E. 1990. Effect of phosphate on antibiotic and extracellular protein-production by Myxococcus-Coralloides-D. Appl Microbiol Biotechnol 33(1):78-80.
    • (1990) Appl Microbiol Biotechnol , vol.33 , Issue.1 , pp. 78-80
    • Gonzalez, F.1    Montoya, M.D.2    Farez, E.3    Arias, J.M.4    Montoya, E.5
  • 19
    • 54249116230 scopus 로고
    • Genetic regulatory mechanisms in the synthesis of proteins
    • Jacob F, Monod J. 1961. Genetic regulatory mechanisms in the synthesis of proteins. J Mol Biol 3:318-356.
    • (1961) J Mol Biol , vol.3 , pp. 318-356
    • Jacob, F.1    Monod, J.2
  • 20
    • 0142059017 scopus 로고    scopus 로고
    • Bioreactor state estimation and control
    • Komives C, Parker RS. 2003. Bioreactor state estimation and control. Curr Opin Biotechnol 14(5):468-474.
    • (2003) Curr Opin Biotechnol , vol.14 , Issue.5 , pp. 468-474
    • Komives, C.1    Parker, R.S.2
  • 21
    • 0021531929 scopus 로고
    • Cybernetic modeling of microbial-growth on multiple substrates
    • Kompala DS, Ramkrishna D, Tsao GT. 1984. Cybernetic modeling of microbial-growth on multiple substrates. Biotechnol Bioeng 26(11):1272-1281.
    • (1984) Biotechnol Bioeng , vol.26 , Issue.11 , pp. 1272-1281
    • Kompala, D.S.1    Ramkrishna, D.2    Tsao, G.T.3
  • 22
    • 0023644423 scopus 로고
    • Generalization of Monod kinetics for analysis of growth data with substrate-inhibition
    • Luong JHT. 1987. Generalization of Monod kinetics for analysis of growth data with substrate-inhibition. Biotechnol Bioeng 29(2):242-248.
    • (1987) Biotechnol Bioeng , vol.29 , Issue.2 , pp. 242-248
    • Luong, J.H.T.1
  • 23
    • 67349251537 scopus 로고    scopus 로고
    • Real time phase detection based online monitoring of batch fermentation processes
    • Maiti SK, Srivastava RK, Bhushan M, Wangikar PP. 2009. Real time phase detection based online monitoring of batch fermentation processes. Process Biochem 44(8):799-811.
    • (2009) Process Biochem , vol.44 , Issue.8 , pp. 799-811
    • Maiti, S.K.1    Srivastava, R.K.2    Bhushan, M.3    Wangikar, P.P.4
  • 24
    • 3843050181 scopus 로고    scopus 로고
    • Phosphate control of the biosynthesis of antibiotics and other secondary metabolites is mediated by the PhoR-PhoP system: An unfinished story
    • Martín JF. 2004. Phosphate control of the biosynthesis of antibiotics and other secondary metabolites is mediated by the PhoR-PhoP system: An unfinished story. J Bacteriol 186(16):5197-5201.
    • (2004) J Bacteriol , vol.186 , Issue.16 , pp. 5197-5201
    • Martín, J.F.1
  • 26
    • 0028268659 scopus 로고
    • Balhimycin, a new glycopeptide antibiotic produced by amycolatopsis Sp Y-86,21022 - Taxonomy, production, isolation and biological-activity
    • Nadkarni SR, Patel MV, Chatterjee S, Vijayakumar EKS, Desikan KR, Blumbach J, Ganguli BN, Limbert M. 1994. Balhimycin, a new glycopeptide antibiotic produced by amycolatopsis Sp Y-86,21022 - Taxonomy, production, isolation and biological-activity. J Antibiot 47(3):334-341.
    • (1994) J Antibiot , vol.47 , Issue.3 , pp. 334-341
    • Nadkarni, S.R.1    Patel, M.V.2    Chatterjee, S.3    Vijayakumar, E.K.S.4    Desikan, K.R.5    Blumbach, J.6    Ganguli, B.N.7    Limbert, M.8
  • 27
    • 84941894443 scopus 로고
    • A mathematical model of growth and alkaloid production in Claviceps purpurea
    • Pazoutova S, Votruba J, Rehacek Z. 1981. A mathematical model of growth and alkaloid production in Claviceps purpurea. Biotechnol Bioeng 23(12):2837-2849.
    • (1981) Biotechnol Bioeng , vol.23 , Issue.12 , pp. 2837-2849
    • Pazoutova, S.1    Votruba, J.2    Rehacek, Z.3
  • 28
    • 0343376474 scopus 로고    scopus 로고
    • Cloning and analysis of a peptide synthetase gene of the balhimycin producer Amycolatopsis mediterranei DSM5908 and development of a gene disruption/replacement system
    • Pelzer S, Reichert W, Huppert M, Heckmann D, Wohlleben W. 1997. Cloning and analysis of a peptide synthetase gene of the balhimycin producer Amycolatopsis mediterranei DSM5908 and development of a gene disruption/replacement system. J Biotechnol 56(2):115-128.
    • (1997) J Biotechnol , vol.56 , Issue.2 , pp. 115-128
    • Pelzer, S.1    Reichert, W.2    Huppert, M.3    Heckmann, D.4    Wohlleben, W.5
  • 29
    • 0036008849 scopus 로고    scopus 로고
    • Glycopeptide biosynthesis in Amycolatopsis mediterranei DSM5908: Function of a haloaenase and a haloperoxidase/ perhydrolase
    • Puk O, Huber P, Bischoff D, Recktenwald J, Jung G, Sussmuth RD, van Pee KH, Wohlleben W, Pelzer S. 2002. Glycopeptide biosynthesis in Amycolatopsis mediterranei DSM5908: Function of a haloaenase and a haloperoxidase/ perhydrolase. Chem Biol 9(2):225-235.
    • (2002) Chem Biol , vol.9 , Issue.2 , pp. 225-235
    • Puk, O.1    Huber, P.2    Bischoff, D.3    Recktenwald, J.4    Jung, G.5    Sussmuth, R.D.6    van Pee, K.H.7    Wohlleben, W.8    Pelzer, S.9
  • 30
    • 0030571215 scopus 로고    scopus 로고
    • Cybernetic modeling of growth in mixed, substitutable substrate environments: Preferential and simultaneous utilization
    • Ramakrishna R, Ramkrishna D, Konopka AE. 1996. Cybernetic modeling of growth in mixed, substitutable substrate environments: Preferential and simultaneous utilization. Biotechnol Bioeng 52(1):141-151.
    • (1996) Biotechnol Bioeng , vol.52 , Issue.1 , pp. 141-151
    • Ramakrishna, R.1    Ramkrishna, D.2    Konopka, A.E.3
  • 31
    • 0031553983 scopus 로고    scopus 로고
    • Microbial growth on substitutable substrates: Characterizing the consumer-resource relationship
    • Ramakrishna R, Ramkrishna D, Konopka AE. 1997. Microbial growth on substitutable substrates: Characterizing the consumer-resource relationship. Biotechnol Bioeng 54(1):77-90.
    • (1997) Biotechnol Bioeng , vol.54 , Issue.1 , pp. 77-90
    • Ramakrishna, R.1    Ramkrishna, D.2    Konopka, A.E.3
  • 32
    • 0001886686 scopus 로고
    • A cybernetic perspective of microbial-growth
    • Ramkrishna D. 1983. A cybernetic perspective of microbial-growth. ACS Symp Ser 207:161-178.
    • (1983) ACS Symp Ser , vol.207 , pp. 161-178
    • Ramkrishna, D.1
  • 33
    • 36348976352 scopus 로고    scopus 로고
    • Systems biology of antibiotic production by microorganisms
    • Rokem JS, Lantz AE, Nielsen J. 2007. Systems biology of antibiotic production by microorganisms. Nat Prod Rep 24(6):1262-1287.
    • (2007) Nat Prod Rep , vol.24 , Issue.6 , pp. 1262-1287
    • Rokem, J.S.1    Lantz, A.E.2    Nielsen, J.3
  • 34
    • 0032976777 scopus 로고    scopus 로고
    • A simple structured model for continuous production of a hybrid antibiotic by Streptomyces lividans pellets in a fluidized-bed bioreactor
    • Sarra M, Casas M, Godia F. 1999. A simple structured model for continuous production of a hybrid antibiotic by Streptomyces lividans pellets in a fluidized-bed bioreactor. Appl Biochem Biotechnol 80(1):39-50.
    • (1999) Appl Biochem Biotechnol , vol.80 , Issue.1 , pp. 39-50
    • Sarra, M.1    Casas, M.2    Godia, F.3
  • 35
    • 50049099382 scopus 로고    scopus 로고
    • Matrix notation for efficient development of first-principles models within PAT applications: Integrated modeling of antibiotic production with streptomyces coelicolor
    • Sin G, Odman P, Petersen N, Lantz AE, Gernaey KV. 2008. Matrix notation for efficient development of first-principles models within PAT applications: Integrated modeling of antibiotic production with streptomyces coelicolor. Biotechnol Bioeng 101(1):153-171.
    • (2008) Biotechnol Bioeng , vol.101 , Issue.1 , pp. 153-171
    • Sin, G.1    Odman, P.2    Petersen, N.3    Lantz, A.E.4    Gernaey, K.V.5
  • 36
    • 0018447475 scopus 로고
    • Mathematical model of cell growth and phosphatase biosynthesis in Saccharomyces carlsbergenesis under phosphate limitation
    • Toda K, Yabe I. 1979. Mathematical model of cell growth and phosphatase biosynthesis in Saccharomyces carlsbergenesis under phosphate limitation. Biotechnol Bioeng 21(3):487-502.
    • (1979) Biotechnol Bioeng , vol.21 , Issue.3 , pp. 487-502
    • Toda, K.1    Yabe, I.2
  • 37
    • 0029346778 scopus 로고
    • Optimal adaptive control of fed-batch fermentation processes
    • Van Impe JF, Bastin G. 1995. Optimal adaptive control of fed-batch fermentation processes. Control Eng Pract 3(7):939-954.
    • (1995) Control Eng Pract , vol.3 , Issue.7 , pp. 939-954
    • Van Impe, J.F.1    Bastin, G.2
  • 38
    • 0342683792 scopus 로고    scopus 로고
    • An optimal strategy to model microbial growth in a multiple substrate environment
    • Venkatesh KV, Doshi P, Rengaswamy R. 1997. An optimal strategy to model microbial growth in a multiple substrate environment. Biotechnol Bioeng 56(6):635-644.
    • (1997) Biotechnol Bioeng , vol.56 , Issue.6 , pp. 635-644
    • Venkatesh, K.V.1    Doshi, P.2    Rengaswamy, R.3


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.