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Volumn 56, Issue 2, 1997, Pages 115-128

Cloning and analysis of a peptide synthetase gene of the balhimycin producer Amycolatopsis mediterranei DSM5908 and development of a gene disruption/replacement system

Author keywords

Amycolatopsis mediterranei; Direct transformation; Gene disruption gene replacement; Glycopeptide antibiotic; Peptide synthetase

Indexed keywords

AMINO ACIDS; ANTIBIOTICS; BIOSYNTHESIS; CELL CULTURE; COLIFORM BACTERIA; DNA SEQUENCES; ENZYMES; FUNGI; GENES;

EID: 0343376474     PISSN: 01681656     EISSN: None     Source Type: Journal    
DOI: 10.1016/S0168-1656(97)00082-5     Document Type: Article
Times cited : (67)

References (46)
  • 2
    • 0017814207 scopus 로고
    • Transformation of plasmid DNA into Streptomyces at high frequency
    • Bibb, M.J., Ward, J.M., Hopwood, D.A., 1978. Transformation of plasmid DNA into Streptomyces at high frequency. Nature 274, 398-400.
    • (1978) Nature , vol.274 , pp. 398-400
    • Bibb, M.J.1    Ward, J.M.2    Hopwood, D.A.3
  • 4
    • 0027120147 scopus 로고
    • Identification of putative multifunctional peptide synthetase genes using highly conserved oligonucleotide sequences derived from known synthetases
    • Borchert, S., Patil, S.S., Marahiel, M.A., 1992. Identification of putative multifunctional peptide synthetase genes using highly conserved oligonucleotide sequences derived from known synthetases. FEMS Microbiol. Lett. 92, 175-180.
    • (1992) FEMS Microbiol. Lett. , vol.92 , pp. 175-180
    • Borchert, S.1    Patil, S.S.2    Marahiel, M.A.3
  • 5
    • 0000182975 scopus 로고
    • XL1-Blue, a high efficiency plasmid transforming recA Escherichia coli strain with beta galactosidase selection
    • Bullock, W.O., Fernandez, J.M., Short, J.M., 1987. XL1-Blue, a high efficiency plasmid transforming recA Escherichia coli strain with beta galactosidase selection. Focus 5, 376-378.
    • (1987) Focus , vol.5 , pp. 376-378
    • Bullock, W.O.1    Fernandez, J.M.2    Short, J.M.3
  • 6
    • 0027937508 scopus 로고
    • Balhimycin, a new glycopeptide antibiotic with an unusual hydrated 3-amino-4-oxoaldopyranose sugar moiety
    • Chatterjee, S., Vijayakumar, E.K.S., Nadkarni, S.R., Patel, M.V., Blumbach, J., Ganguli, B.N., 1994. Balhimycin, a new glycopeptide antibiotic with an unusual hydrated 3-amino-4-oxoaldopyranose sugar moiety. J. Org. Chem. 59, 3480-3484.
    • (1994) J. Org. Chem. , vol.59 , pp. 3480-3484
    • Chatterjee, S.1    Vijayakumar, E.K.S.2    Nadkarni, S.R.3    Patel, M.V.4    Blumbach, J.5    Ganguli, B.N.6
  • 7
    • 0027525974 scopus 로고
    • Genes for a β-lactamase, a penicillin-binding protein and a transmembrane protein are clustered with the cephamycin biosynthetic genes in Nocardia lactamdurans
    • Coque, J.J.R., Liras, P., Martin, J.F., 1993. Genes for a β-lactamase, a penicillin-binding protein and a transmembrane protein are clustered with the cephamycin biosynthetic genes in Nocardia lactamdurans. EMBO J. 12, 631-639.
    • (1993) EMBO J. , vol.12 , pp. 631-639
    • Coque, J.J.R.1    Liras, P.2    Martin, J.F.3
  • 9
    • 0028807689 scopus 로고
    • Multienzymatic non-ribosomal peptide biosynthesis: Identification of the functional domains catalysing peptide elongation and epimerisation
    • De Crécy-Lagard, V., Marliére, P., Saurin, W., 1995. Multienzymatic non-ribosomal peptide biosynthesis: identification of the functional domains catalysing peptide elongation and epimerisation. C.R. Acad. Sci. Paris, Life Sciences 318, 927-936.
    • (1995) C.R. Acad. Sci. Paris, Life Sciences , vol.318 , pp. 927-936
    • De Crécy-Lagard, V.1    Marliére, P.2    Saurin, W.3
  • 10
    • 0027299621 scopus 로고
    • Nucleotide sequence of 5′ portion of srfA that contains the region required for competence establishment in Bacillus subtilis
    • Fuma, S., Fujishima, Y., Corbell, N., D'Souza, C., Nakano, M.M., Zuber, P., Yamane, K., 1993. Nucleotide sequence of 5′ portion of srfA that contains the region required for competence establishment in Bacillus subtilis. Nucleic Acids Res. 21, 93-97.
    • (1993) Nucleic Acids Res. , vol.21 , pp. 93-97
    • Fuma, S.1    Fujishima, Y.2    Corbell, N.3    D'Souza, C.4    Nakano, M.M.5    Zuber, P.6    Yamane, K.7
  • 11
    • 0022366863 scopus 로고
    • Cloning of a chloramphenicol acetyltransferase gene of Streptomyces acrimycini and its expression in Streptomyces and Escherichia coli
    • Gil, J.A., Kieser, H.M., Hopwood, D.A., 1985. Cloning of a chloramphenicol acetyltransferase gene of Streptomyces acrimycini and its expression in Streptomyces and Escherichia coli. Gene 38, 1-8.
    • (1985) Gene , vol.38 , pp. 1-8
    • Gil, J.A.1    Kieser, H.M.2    Hopwood, D.A.3
  • 12
    • 0025971441 scopus 로고
    • Gene disruption and gene replacement in Streptomyces via single stranded DNA transformation of integration vectors
    • Hillemann, D., Pühler, A., Wohlleben, W., 1991. Gene disruption and gene replacement in Streptomyces via single stranded DNA transformation of integration vectors. Nucleic Acids Res. 19, 727-731.
    • (1991) Nucleic Acids Res. , vol.19 , pp. 727-731
    • Hillemann, D.1    Pühler, A.2    Wohlleben, W.3
  • 14
    • 0026539625 scopus 로고
    • Targeted gene replacements in Streptomyces polyketide synthase gene cluster: Role for the acyl carrier protein
    • Khosla, C., Ebert-Khosla, S., Hopwood, D.A., 1992. Targeted gene replacements in Streptomyces polyketide synthase gene cluster: role for the acyl carrier protein. Mol. Microbiol. 6, 3237-3249.
    • (1992) Mol. Microbiol. , vol.6 , pp. 3237-3249
    • Khosla, C.1    Ebert-Khosla, S.2    Hopwood, D.A.3
  • 15
    • 0029921158 scopus 로고    scopus 로고
    • A nonribosomal system of peptide biosynthesis
    • Kleinkauf, H., von Döhren, H., 1996. A nonribosomal system of peptide biosynthesis. Eur. J. Biochem. 236, 335-351.
    • (1996) Eur. J. Biochem. , vol.236 , pp. 335-351
    • Kleinkauf, H.1    Von Döhren, H.2
  • 16
    • 0023801637 scopus 로고
    • Organization of the biosynthesis genes for the peptide antibiotic gramicidin S
    • Krause, M., Marahiel, M.A., 1988. Organization of the biosynthesis genes for the peptide antibiotic gramicidin S. J. Bacteriol. 170, 4669-4674.
    • (1988) J. Bacteriol. , vol.170 , pp. 4669-4674
    • Krause, M.1    Marahiel, M.A.2
  • 17
    • 0024437776 scopus 로고
    • Gramicidin S biosynthesis operon containing the structural genes grsA and grsB has an open reading frame encoding a protein homologous to fatty acid thioesterases
    • Krätzschmar, J., Krause, M., Marahiel, M.A., 1989. Gramicidin S biosynthesis operon containing the structural genes grsA and grsB has an open reading frame encoding a protein homologous to fatty acid thioesterases. J. Bacteriol. 171, 5422-5429.
    • (1989) J. Bacteriol. , vol.171 , pp. 5422-5429
    • Krätzschmar, J.1    Krause, M.2    Marahiel, M.A.3
  • 18
    • 0028080769 scopus 로고
    • Efficient transformation of the cephamycin C producer Nocardia lactamdurans and development of shuttle and promotor-probe cloning vectors
    • Kumar, C.V., Coque, J.-J., Martin, J.F., 1994. Efficient transformation of the cephamycin C producer Nocardia lactamdurans and development of shuttle and promotor-probe cloning vectors. Appl. Environ. Microbiol. 60, 4086-4093.
    • (1994) Appl. Environ. Microbiol. , vol.60 , pp. 4086-4093
    • Kumar, C.V.1    Coque, J.-J.2    Martin, J.F.3
  • 19
    • 0025847129 scopus 로고
    • Construction of a hybrid plasmid capable of replication in Amycolatopsis mediterranei
    • Lal, R., Lal, S., Grund, E., Eichenlaub, R., 1991. Construction of a hybrid plasmid capable of replication in Amycolatopsis mediterranei. Appl. Environ. Microbiol. 57, 665-671.
    • (1991) Appl. Environ. Microbiol. , vol.57 , pp. 665-671
    • Lal, R.1    Lal, S.2    Grund, E.3    Eichenlaub, R.4
  • 20
    • 0005107426 scopus 로고
    • Fermentation and biosynthesis of glycopeptide antibiotics
    • Bushell, M.E., Graefe, U. (Eds.), Elsevier, Amsterdam
    • Lancini, G.C., 1989. Fermentation and biosynthesis of glycopeptide antibiotics. In: Bushell, M.E., Graefe, U. (Eds.), Bioactive Metabolites from Microorganisms (Progress in Industrial Microbiology 27). Elsevier, Amsterdam, pp. 283-287.
    • (1989) Bioactive Metabolites from Microorganisms (Progress in Industrial Microbiology 27) , vol.27 , pp. 283-287
    • Lancini, G.C.1
  • 21
    • 0022656043 scopus 로고
    • Two new genera of nocardioform actinomycetes: Amycolata gen. nov. and Amycolatopsis gen. nov
    • Lechevalier, M.P., Prauser, H., Labeda, D.P., Ruan, J.-S., 1986. Two new genera of nocardioform actinomycetes: Amycolata gen. nov. and Amycolatopsis gen. nov. Int. J. Syst. Bacteriol. 36, 29-37.
    • (1986) Int. J. Syst. Bacteriol. , vol.36 , pp. 29-37
    • Lechevalier, M.P.1    Prauser, H.2    Labeda, D.P.3    Ruan, J.-S.4
  • 22
    • 0024225034 scopus 로고
    • Characterization of a unique methyl-specific restriction system in Streptomyces avermitilis
    • MacNeil, D.J., 1988. Characterization of a unique methyl-specific restriction system in Streptomyces avermitilis. J. Bacteriol. 170, 5607-5612.
    • (1988) J. Bacteriol. , vol.170 , pp. 5607-5612
    • MacNeil, D.J.1
  • 23
    • 0026575735 scopus 로고
    • Analysis of Streptomyces avermitilis genes required for avermectin biosynthesis utilizing a novel integration vector
    • MacNeil, D.J., Gewain, K.M., Ruby, C.L., Dezeny, G., Gibbons, P.H., MacNeil, T., 1992. Analysis of Streptomyces avermitilis genes required for avermectin biosynthesis utilizing a novel integration vector. Gene 111, 61-68.
    • (1992) Gene , vol.111 , pp. 61-68
    • MacNeil, D.J.1    Gewain, K.M.2    Ruby, C.L.3    Dezeny, G.4    Gibbons, P.H.5    MacNeil, T.6
  • 24
    • 0025992974 scopus 로고
    • Transformation system for Amycolatopsis (Nocardia) mediterranei: Direct transformation of mycelium with plasmid DNA
    • Madon, J., Hütter, R., 1991. Transformation system for Amycolatopsis (Nocardia) mediterranei: direct transformation of mycelium with plasmid DNA. J. Bacteriol. 173, 6325-6331.
    • (1991) J. Bacteriol. , vol.173 , pp. 6325-6331
    • Madon, J.1    Hütter, R.2
  • 25
    • 0026696975 scopus 로고
    • Multidomain enzymes involved in peptide synthesis
    • Marahiel, M.A., 1992. Multidomain enzymes involved in peptide synthesis. FEBS Lett. 307, 40-43.
    • (1992) FEBS Lett. , vol.307 , pp. 40-43
    • Marahiel, M.A.1
  • 26
    • 0342571131 scopus 로고
    • Tools for the molecular biologists: New phage promoter vectors
    • Martin, R., 1987. Tools for the molecular biologists: new phage promoter vectors. Focus 9, 11-12.
    • (1987) Focus , vol.9 , pp. 11-12
    • Martin, R.1
  • 27
    • 0023178174 scopus 로고
    • Efficient transformation of Amycolatopsis orientalis (Nocardia orientalis) protoplasts by Streptomyces plasmids
    • Matsushima, P., McHenney, M., Baltz, R.H., 1987. Efficient transformation of Amycolatopsis orientalis (Nocardia orientalis) protoplasts by Streptomyces plasmids. J. Bacteriol. 169, 2298-2300.
    • (1987) J. Bacteriol. , vol.169 , pp. 2298-2300
    • Matsushima, P.1    McHenney, M.2    Baltz, R.H.3
  • 28
    • 0028890130 scopus 로고
    • Nucleotide sequence of pvdD, a pyoverdine biosynthetic gene from Pseudomonas aeruginosa: PvdD has similarity to peptide synthetases
    • Merriman, T.R., Merriman, M.E., Lamont, I.L., 1995. Nucleotide sequence of pvdD, a pyoverdine biosynthetic gene from Pseudomonas aeruginosa: PvdD has similarity to peptide synthetases. J. Bacteriol. 177, 252-258.
    • (1995) J. Bacteriol. , vol.177 , pp. 252-258
    • Merriman, T.R.1    Merriman, M.E.2    Lamont, I.L.3
  • 29
    • 0028945967 scopus 로고
    • Streptomyces ghanaensis plasmid pSG5: Nucleotide sequence analysis of the self-transmissible minimal replicon and characterization of the replication mode
    • Muth, G., Farr, M., Hartmann, V., Wohlleben, W., 1995. Streptomyces ghanaensis plasmid pSG5: nucleotide sequence analysis of the self-transmissible minimal replicon and characterization of the replication mode. Plasmid 33, 113-126.
    • (1995) Plasmid , vol.33 , pp. 113-126
    • Muth, G.1    Farr, M.2    Hartmann, V.3    Wohlleben, W.4
  • 31
    • 0023989064 scopus 로고
    • Improved tools for biological sequence comparison
    • Pearson, W.R., Lipman, D.J., 1988. Improved tools for biological sequence comparison. Proc. Natl. Acad. Sci. USA 85, 2444-2448.
    • (1988) Proc. Natl. Acad. Sci. USA , vol.85 , pp. 2444-2448
    • Pearson, W.R.1    Lipman, D.J.2
  • 32
    • 0023629563 scopus 로고
    • New and versatile cloning-vectors with kanamycin resistance marker
    • Pridmore, R.D., 1987. New and versatile cloning-vectors with kanamycin resistance marker. Gene 56, 309-312.
    • (1987) Gene , vol.56 , pp. 309-312
    • Pridmore, R.D.1
  • 35
    • 0022476681 scopus 로고
    • Protoplast preparation and regeneration in Nocardia mediterranei
    • Schupp, T., Divers, M., 1986. Protoplast preparation and regeneration in Nocardia mediterranei. FEMS Microbiol. Lett. 36, 159-162.
    • (1986) FEMS Microbiol. Lett. , vol.36 , pp. 159-162
    • Schupp, T.1    Divers, M.2
  • 36
    • 0028837014 scopus 로고
    • Modular structure of genes encoding multifunctional peptide synthetase required for non-ribosomal peptide synthesis
    • Stachelhaus, T., Marahiel, M.A., 1995. Modular structure of genes encoding multifunctional peptide synthetase required for non-ribosomal peptide synthesis. FEMS Microbiol. Lett. 125, 3-14.
    • (1995) FEMS Microbiol. Lett. , vol.125 , pp. 3-14
    • Stachelhaus, T.1    Marahiel, M.A.2
  • 37
    • 0020039567 scopus 로고
    • Codon preference and its use in identifying protein coding regions in large DNA sequences
    • Staden, R., McLachlan, A.D., 1982. Codon preference and its use in identifying protein coding regions in large DNA sequences. Nucleic Acids Res. 10, 141-156.
    • (1982) Nucleic Acids Res. , vol.10 , pp. 141-156
    • Staden, R.1    McLachlan, A.D.2
  • 38
    • 0020367857 scopus 로고
    • Cloning of antibiotic resistance and nutritional genes in Streptomyces
    • Thompson, C.J., Ward, J.M., Hopwood, D.A., 1982. Cloning of antibiotic resistance and nutritional genes in Streptomyces. J. Bacteriol. 151, 668-677.
    • (1982) J. Bacteriol. , vol.151 , pp. 668-677
    • Thompson, C.J.1    Ward, J.M.2    Hopwood, D.A.3
  • 39
    • 0028503009 scopus 로고
    • A general approach for identifying and cloning peptide synthetase genes
    • Turgay, K., Marahiel, M.A., 1994. A general approach for identifying and cloning peptide synthetase genes. Peptide Res. 7, 238-241.
    • (1994) Peptide Res. , vol.7 , pp. 238-241
    • Turgay, K.1    Marahiel, M.A.2
  • 40
    • 0022369823 scopus 로고
    • N-Methyltransferase of Streptomyces erythraeus that confers resistance to the macrolide-lincosamide-streptogramin B antibiotics: Amino acid sequence and its homology to cognate R-factor enzymes from pathogenic bacilli and cocci
    • Uchiyama, H., Weisblum, B., 1985. N-Methyltransferase of Streptomyces erythraeus that confers resistance to the macrolide-lincosamide-streptogramin B antibiotics: amino acid sequence and its homology to cognate R-factor enzymes from pathogenic bacilli and cocci. Gene 38, 103-110.
    • (1985) Gene , vol.38 , pp. 103-110
    • Uchiyama, H.1    Weisblum, B.2
  • 42
    • 0029100585 scopus 로고
    • Transformation of the methylotrophic actinomycete Amycolatopsis methanolica with plasmid DNA: Stimulatory effect of a pMEA300-encoded gene
    • Vrijbloed, J.W., Madon, J., Dijkhuizen, L., 1995. Transformation of the methylotrophic actinomycete Amycolatopsis methanolica with plasmid DNA: stimulatory effect of a pMEA300-encoded gene. Plasmid 34, 96-104.
    • (1995) Plasmid , vol.34 , pp. 96-104
    • Vrijbloed, J.W.1    Madon, J.2    Dijkhuizen, L.3
  • 43
    • 0024224534 scopus 로고
    • Complete nucleotide sequence of the tycA gene coding the tyrocidine synthetase 1 from Bacillus brevis
    • Weckermann, R., Fürbaß, R., Marahiel, M.A., 1988. Complete nucleotide sequence of the tycA gene coding the tyrocidine synthetase 1 from Bacillus brevis. Nucleic Acids Res. 16, 11841.
    • (1988) Nucleic Acids Res. , vol.16 , pp. 11841
    • Weckermann, R.1    Fürbaß, R.2    Marahiel, M.A.3
  • 45
    • 0021943518 scopus 로고
    • Improved M13 phage cloning vectors and host strains: Nucleotide sequences of the M13mp18 and pUC19 vectors
    • Yanisch-Perron, C., Vieira, J., Messing, J., 1985. Improved M13 phage cloning vectors and host strains: nucleotide sequences of the M13mp18 and pUC19 vectors. Gene 33, 103-119.
    • (1985) Gene , vol.33 , pp. 103-119
    • Yanisch-Perron, C.1    Vieira, J.2    Messing, J.3
  • 46
    • 0028355330 scopus 로고
    • Cloning, sequencing, and analysis of the griseusin polyketide synthase gene cluster from Streptomyces griseus
    • Yu, T.-W., Bibb, M.J., Revill, W.P., Hopwood, D.A., 1994. Cloning, sequencing, and analysis of the griseusin polyketide synthase gene cluster from Streptomyces griseus. J. Bacteriol. 176, 2627-2634.
    • (1994) J. Bacteriol. , vol.176 , pp. 2627-2634
    • Yu, T.-W.1    Bibb, M.J.2    Revill, W.P.3    Hopwood, D.A.4


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.