-
1
-
-
0035179871
-
Assembly of microarrays for genome-wide measurement of DNA copy number
-
Snijders A, Nowak N, Segraves R, Blackwood S et al. Assembly of microarrays for genome-wide measurement of DNA copy number. Nature Genetics 2001; 29:263-264.
-
(2001)
Nature Genetics
, vol.29
, pp. 263-264
-
-
Snijders, A.1
Nowak, N.2
Segraves, R.3
Blackwood, S.4
-
2
-
-
0032542364
-
Genetic instabilities in human cancers
-
Lengauer C, Kinzler K, Vogelstein B. Genetic instabilities in human cancers. Nature 1998; 396:643-649.
-
(1998)
Nature
, vol.396
, pp. 643-649
-
-
Lengauer, C.1
Kinzler, K.2
Vogelstein, B.3
-
3
-
-
0034863834
-
-
Eilers P, Boer J, van Ommen G, van Houwelingen J. Classification of microarray data with penalized logistic regression. Proceedings of SPIE 2001, 4266: Progress in Biomedical Optics and Imaging 2:187-198.
-
Eilers P, Boer J, van Ommen G, van Houwelingen J. Classification of microarray data with penalized logistic regression. Proceedings of SPIE 2001, Vol. 4266: Progress in Biomedical Optics and Imaging 2:187-198.
-
-
-
-
4
-
-
0037623370
-
Cancer classification using gene expression data
-
Lu Y, Han J. Cancer classification using gene expression data. Information Systems 2003; 28:243-268.
-
(2003)
Information Systems
, vol.28
, pp. 243-268
-
-
Lu, Y.1
Han, J.2
-
5
-
-
15944363312
-
Classification of gene microarrays by penalized logistic regression
-
Zhu J, Hastie T. Classification of gene microarrays by penalized logistic regression. Biostatistics 2004; 5:427-443.
-
(2004)
Biostatistics
, vol.5
, pp. 427-443
-
-
Zhu, J.1
Hastie, T.2
-
6
-
-
27744594238
-
Gene expression data classification with kernel principal component analysis
-
Liu Z, Chen D, Bensmail H. Gene expression data classification with kernel principal component analysis. Journal of Biomedicine and Biotechnology 2005; 2:155-159.
-
(2005)
Journal of Biomedicine and Biotechnology
, vol.2
, pp. 155-159
-
-
Liu, Z.1
Chen, D.2
Bensmail, H.3
-
7
-
-
34248550574
-
Two-stage classification methods for microarray data
-
Wong T, Hsu C. Two-stage classification methods for microarray data. Expert Systems with Applications 2008; 34:375-383.
-
(2008)
Expert Systems with Applications
, vol.34
, pp. 375-383
-
-
Wong, T.1
Hsu, C.2
-
8
-
-
34548725570
-
Robust smooth segmentation approach for array CGH data analysis
-
Huang J, Gusnanto A, O'Sullivan K, Staaf J, Borg A, Pawitan Y. Robust smooth segmentation approach for array CGH data analysis. Bioinformatics 2007; 23:2463-2469.
-
(2007)
Bioinformatics
, vol.23
, pp. 2463-2469
-
-
Huang, J.1
Gusnanto, A.2
O'Sullivan, K.3
Staaf, J.4
Borg, A.5
Pawitan, Y.6
-
9
-
-
27944455289
-
A comparison study: Applying segmentation to array CGH data for downstream analyses
-
Willenbrock H, Fridlyand J. A comparison study: applying segmentation to array CGH data for downstream analyses. Bioinformatics 2005; 21:4084-4091.
-
(2005)
Bioinformatics
, vol.21
, pp. 4084-4091
-
-
Willenbrock, H.1
Fridlyand, J.2
-
10
-
-
7244248755
-
A comparative study of feature selection and multiclass classification methods for tissue classification based on gene expression
-
Li T, Zhang C, Ogihara M. A comparative study of feature selection and multiclass classification methods for tissue classification based on gene expression. Bioinformatics 2004; 20:2429-2437.
-
(2004)
Bioinformatics
, vol.20
, pp. 2429-2437
-
-
Li, T.1
Zhang, C.2
Ogihara, M.3
-
11
-
-
46249117458
-
Classification and feature selection algorithms for multi-class CGH data
-
Liu J, Ranka S, Kahveci T. Classification and feature selection algorithms for multi-class CGH data. Bioinformatics 2008; 24:i86-i95.
-
(2008)
Bioinformatics
, vol.24
-
-
Liu, J.1
Ranka, S.2
Kahveci, T.3
-
12
-
-
46249091578
-
Classification of arrayCGH data using fused SVM
-
Rapaport F, Barillot E, Vert J. Classification of arrayCGH data using fused SVM. Bioinformatics 2008; 24: i375-i382.
-
(2008)
Bioinformatics
, vol.24
-
-
Rapaport, F.1
Barillot, E.2
Vert, J.3
-
13
-
-
3543105225
-
Circular binary segmentation for the analysis of array-based DNA copy number data
-
Olshen AB, Venkatraman ES, Lucito R, Wigler M. Circular binary segmentation for the analysis of array-based DNA copy number data. Biostatistics 2004; 5:557-572.
-
(2004)
Biostatistics
, vol.5
, pp. 557-572
-
-
Olshen, A.B.1
Venkatraman, E.S.2
Lucito, R.3
Wigler, M.4
-
14
-
-
24744468647
-
Distinct genomic profiles in hereditary breast tumors identified by array-based comparative genomic hybridization
-
Jonsson G, Naylor T, Vallon-Christersson J, Staaf J, Huang J, Ward MR, Greshock JD, Luts L, Olsson H, Rahman N, Stratton M, Ringnér M, Barg A, Weber BL. Distinct genomic profiles in hereditary breast tumors identified by array-based comparative genomic hybridization. Cancer Research 2005; 65:7612-7621.
-
(2005)
Cancer Research
, vol.65
, pp. 7612-7621
-
-
Jonsson, G.1
Naylor, T.2
Vallon-Christersson, J.3
Staaf, J.4
Huang, J.5
Ward, M.R.6
Greshock, J.D.7
Luts, L.8
Olsson, H.9
Rahman, N.10
Stratton, M.11
Ringnér, M.12
Barg, A.13
Weber, B.L.14
-
17
-
-
12844266177
-
Sparsity and smoothness via the fused LASSO
-
Tibshirani R, Saunders M, Rosset S, Zhu J, Knight K. Sparsity and smoothness via the fused LASSO. Journal of the Royal Statistical Society (B) 2005; 67:91-108.
-
(2005)
Journal of the Royal Statistical Society (B)
, vol.67
, pp. 91-108
-
-
Tibshirani, R.1
Saunders, M.2
Rosset, S.3
Zhu, J.4
Knight, K.5
-
18
-
-
73449097976
-
-
Pawitan Y. In All Likelihood: Statistical Modelling and Inference Using Likelihood. Oxford University Press: Oxford, 2001.
-
Pawitan Y. In All Likelihood: Statistical Modelling and Inference Using Likelihood. Oxford University Press: Oxford, 2001.
-
-
-
-
20
-
-
73449133199
-
-
Goeman J. penalized: L1 (lasso) and L2 (ridge) penalized estimation in GLMs and in the Cox model. Software available at: http://cran.r-project.org/ last accessed July 6, 2009.
-
Goeman J. penalized: L1 (lasso) and L2 (ridge) penalized estimation in GLMs and in the Cox model. Software available at: http://cran.r-project.org/ last accessed July 6, 2009.
-
-
-
-
21
-
-
20544465379
-
Rare amplicons implicate frequent deregulation of cell fate specification pathways in oral squamous cell carcinoma
-
Snijders AM, Schmidt BL, Fridlyand J, Dekker N, Pinkel D, Jordan RC, Albertson DG. Rare amplicons implicate frequent deregulation of cell fate specification pathways in oral squamous cell carcinoma. Oncogene 2005; 24:2432-4242.
-
(2005)
Oncogene
, vol.24
, pp. 2432-4242
-
-
Snijders, A.M.1
Schmidt, B.L.2
Fridlyand, J.3
Dekker, N.4
Pinkel, D.5
Jordan, R.C.6
Albertson, D.G.7
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