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Volumn 451, Issue 1-2, 2010, Pages 15-22

Analysis of ribosomal RNA transcription termination and 3' end processing in Leishmania amazonensis

Author keywords

Polymerase I; Processing; RDNA; Terminator element

Indexed keywords

GREEN FLUORESCENT PROTEIN; PROTOZOAL DNA; PROTOZOAL RNA; RIBOSOME DNA; RIBOSOME RNA; RNA 28S; SPACER DNA;

EID: 73349129339     PISSN: 03781119     EISSN: None     Source Type: Journal    
DOI: 10.1016/j.gene.2009.11.002     Document Type: Article
Times cited : (5)

References (29)
  • 1
    • 27144541056 scopus 로고    scopus 로고
    • Elucidating the role of H/ACA-like RNAs in trans-splicing and rRNA processing via RNA interference silencing of the Trypanosoma brucei CBF5 pseudouridine synthase
    • Barth S, Hury A, Liang X, Michaeli S. Elucidating the role of H/ACA-like RNAs in trans-splicing and rRNA processing via RNA interference silencing of the Trypanosoma brucei CBF5 pseudouridine synthase. J. Biol. Chem. 2005, 280:34558-34568.
    • (2005) J. Biol. Chem. , vol.280 , pp. 34558-34568
    • Barth, S.1    Hury, A.2    Liang, X.3    Michaeli, S.4
  • 2
    • 0034650185 scopus 로고    scopus 로고
    • A single-stranded DNA-binding protein shared by telomeric repeats, the variant surface glycoprotein transcription promoter and the procyclic transcription terminator of Trypanosoma brucei
    • Berberof M, Vanhamme L, Alexandre S, Lips S, Tebabi P, Pays E. A single-stranded DNA-binding protein shared by telomeric repeats, the variant surface glycoprotein transcription promoter and the procyclic transcription terminator of Trypanosoma brucei. Nucleic Acids Res. 2000, 28:597-604.
    • (2000) Nucleic Acids Res. , vol.28 , pp. 597-604
    • Berberof, M.1    Vanhamme, L.2    Alexandre, S.3    Lips, S.4    Tebabi, P.5    Pays, E.6
  • 4
    • 0034724279 scopus 로고    scopus 로고
    • Recognition of a conserved class of RNA tetraloops by Saccharomyces cerevisiae RNase III
    • Chanfreau G, Buckle M, Jacquier A. Recognition of a conserved class of RNA tetraloops by Saccharomyces cerevisiae RNase III. Proc. Natl. Acad. Sci. U. S. A. 2000, 97:3142-3147.
    • (2000) Proc. Natl. Acad. Sci. U. S. A. , vol.97 , pp. 3142-3147
    • Chanfreau, G.1    Buckle, M.2    Jacquier, A.3
  • 5
    • 0027418343 scopus 로고
    • The Trypanosoma cruzi ribosomal RNA encoding gene: analysis of promoter and upstream intergenic spacer sequences
    • Dietrich P, Soares M, Alfonso M, Floeter-Winter L. The Trypanosoma cruzi ribosomal RNA encoding gene: analysis of promoter and upstream intergenic spacer sequences. Gene 1993, 125:103-107.
    • (1993) Gene , vol.125 , pp. 103-107
    • Dietrich, P.1    Soares, M.2    Alfonso, M.3    Floeter-Winter, L.4
  • 6
    • 22244453726 scopus 로고    scopus 로고
    • The genome sequence of Trypanosoma cruzi, etiologic agent of Chagas disease
    • El-Sayed N, Myler P, Bartholomeu D, Nilsson D, Aggarwal G, Tran A, et al. The genome sequence of Trypanosoma cruzi, etiologic agent of Chagas disease. Science 2005, 309:409-415.
    • (2005) Science , vol.309 , pp. 409-415
    • El-Sayed, N.1    Myler, P.2    Bartholomeu, D.3    Nilsson, D.4    Aggarwal, G.5    Tran, A.6
  • 7
    • 0029897406 scopus 로고    scopus 로고
    • The promoter for the ribosomal RNA genes of Leishmania chagasi
    • Gay L, Wilson M, Donelson J. The promoter for the ribosomal RNA genes of Leishmania chagasi. Mol. Biochem. Parasitol. 1996, 77:193-200.
    • (1996) Mol. Biochem. Parasitol. , vol.77 , pp. 193-200
    • Gay, L.1    Wilson, M.2    Donelson, J.3
  • 8
    • 0025356351 scopus 로고
    • Identification and sequence analysis of the ribosomal DNA promoter region of Crithidia fasciculata
    • Grondal E, Evers R, Cornelissen A. Identification and sequence analysis of the ribosomal DNA promoter region of Crithidia fasciculata. Nucleic Acids Res. 1990, 18:1333-1338.
    • (1990) Nucleic Acids Res. , vol.18 , pp. 1333-1338
    • Grondal, E.1    Evers, R.2    Cornelissen, A.3
  • 11
    • 0033567005 scopus 로고    scopus 로고
    • Two 5'-ETS regions implicated in interactions with U3 snoRNA are required for small subunit rRNA maturation in Trypanosoma brucei
    • Hartshorne T, Toyofuku W. Two 5'-ETS regions implicated in interactions with U3 snoRNA are required for small subunit rRNA maturation in Trypanosoma brucei. Nucleic Acids Res. 1999, 27:3300-3309.
    • (1999) Nucleic Acids Res. , vol.27 , pp. 3300-3309
    • Hartshorne, T.1    Toyofuku, W.2
  • 13
    • 0025650360 scopus 로고
    • Development of a stable Leishmania expression vector and application to the study of parasite surface antigen genes
    • LeBowitz J, Coburn C, McMahon-Pratt D, Beverley S. Development of a stable Leishmania expression vector and application to the study of parasite surface antigen genes. Proc. Natl. Acad. Sci. U. S. A. 1990, 87:9736-9740.
    • (1990) Proc. Natl. Acad. Sci. U. S. A. , vol.87 , pp. 9736-9740
    • LeBowitz, J.1    Coburn, C.2    McMahon-Pratt, D.3    Beverley, S.4
  • 14
    • 0028358229 scopus 로고
    • Trypanosoma cruzi ribosomal DNA: mapping of a putative distal promoter
    • Martinez-Calvillo S, Hernández R. Trypanosoma cruzi ribosomal DNA: mapping of a putative distal promoter. Gene 1994, 142:243-247.
    • (1994) Gene , vol.142 , pp. 243-247
    • Martinez-Calvillo, S.1    Hernández, R.2
  • 15
    • 0034892927 scopus 로고    scopus 로고
    • Genomic organization and functional characterization of the Leishmania major Friedlin ribosomal RNA gene locus
    • Martinez-Calvillo S, Sunkin S, Yan S, Fox M, Stuart K, Myler P. Genomic organization and functional characterization of the Leishmania major Friedlin ribosomal RNA gene locus. Mol. Biochem. Parasitol. 2001, 116:147-157.
    • (2001) Mol. Biochem. Parasitol. , vol.116 , pp. 147-157
    • Martinez-Calvillo, S.1    Sunkin, S.2    Yan, S.3    Fox, M.4    Stuart, K.5    Myler, P.6
  • 16
    • 0028309565 scopus 로고
    • Intrangenic processing in yeast rRNA is dependent on the 3' external transcribed spacer
    • Melekhovers Y, Good L, Elena S, Nazar R. Intrangenic processing in yeast rRNA is dependent on the 3' external transcribed spacer. J. Mol. Biol. 1994, 239:170-180.
    • (1994) J. Mol. Biol. , vol.239 , pp. 170-180
    • Melekhovers, Y.1    Good, L.2    Elena, S.3    Nazar, R.4
  • 17
    • 0023660569 scopus 로고
    • Trypanosoma brucei repeated element with unusual structural and transcriptional properties
    • Murphy N, Pays A, Tebabi P, Coquelet H, Guyaux M, Steinert M, Pays E. Trypanosoma brucei repeated element with unusual structural and transcriptional properties. J. Mol. Biol. 1987, 195:855-871.
    • (1987) J. Mol. Biol. , vol.195 , pp. 855-871
    • Murphy, N.1    Pays, A.2    Tebabi, P.3    Coquelet, H.4    Guyaux, M.5    Steinert, M.6    Pays, E.7
  • 18
    • 0026779424 scopus 로고
    • A novel antifolate resistance gene on the amplified H circle of Leishmania
    • Papadopoulou B, Roy G, Ouellette M. A novel antifolate resistance gene on the amplified H circle of Leishmania. EMBO J. 1992, 11:3601-3608.
    • (1992) EMBO J. , vol.11 , pp. 3601-3608
    • Papadopoulou, B.1    Roy, G.2    Ouellette, M.3
  • 19
    • 0024383703 scopus 로고
    • Regulatory elements of the generic ribosomal gene
    • Reeder R. Regulatory elements of the generic ribosomal gene. Curr. Opin. Cell Biol. 1989, 1:466-474.
    • (1989) Curr. Opin. Cell Biol. , vol.1 , pp. 466-474
    • Reeder, R.1
  • 20
    • 0030687932 scopus 로고    scopus 로고
    • Terminating transcription in eukaryotes: lessons learned from RNA polymerase I.
    • Reeder R, Lang W. Terminating transcription in eukaryotes: lessons learned from RNA polymerase I. Trends Biochem. Sci. 1997, 22:473-477.
    • (1997) Trends Biochem. Sci. , vol.22 , pp. 473-477
    • Reeder, R.1    Lang, W.2
  • 21
    • 0032740975 scopus 로고    scopus 로고
    • Saccharomyces cerevisiae RNA polymerase I terminates transcription at the Reb1 terminator in vivo
    • Reeder R, Guevara P, Roan J. Saccharomyces cerevisiae RNA polymerase I terminates transcription at the Reb1 terminator in vivo. Mol. Cell. Biol. 1999, 19:7369-7376.
    • (1999) Mol. Cell. Biol. , vol.19 , pp. 7369-7376
    • Reeder, R.1    Guevara, P.2    Roan, J.3
  • 22
    • 0031046815 scopus 로고    scopus 로고
    • A region containing repeated elements in associated with transcriptional termination of Leishmania infantum ribosomal RNA genes
    • Requena J, Soto M, Quijada L, Carrillo G, Alonso C. A region containing repeated elements in associated with transcriptional termination of Leishmania infantum ribosomal RNA genes. Mol. Biochem. Parasitol. 1997, 84:101-110.
    • (1997) Mol. Biochem. Parasitol. , vol.84 , pp. 101-110
    • Requena, J.1    Soto, M.2    Quijada, L.3    Carrillo, G.4    Alonso, C.5
  • 23
    • 0026517735 scopus 로고
    • The PARP and VSG genes of Trypanosoma brucei do not resemble RNA polymerase II transcription units in sensitivity to Sarkosyl in nuclear run on assays
    • Rudenko G, Lee M, Van der Ploeg L. The PARP and VSG genes of Trypanosoma brucei do not resemble RNA polymerase II transcription units in sensitivity to Sarkosyl in nuclear run on assays. Nucleic Acids Res. 1992, 20:303-306.
    • (1992) Nucleic Acids Res. , vol.20 , pp. 303-306
    • Rudenko, G.1    Lee, M.2    Van der Ploeg, L.3
  • 25
    • 0034666122 scopus 로고    scopus 로고
    • The 28S-18S rDNA intergenic spacer from Crithidia fasciculata: repeated sequences, length heterogeneity, putative processing sites and potential interactions between U3 small nucleolar RNA and the ribosomal RNA precursor
    • Schnare M, Collings J, Spencer D, Gray M. The 28S-18S rDNA intergenic spacer from Crithidia fasciculata: repeated sequences, length heterogeneity, putative processing sites and potential interactions between U3 small nucleolar RNA and the ribosomal RNA precursor. Nucleic Acids Res. 2000, 28:3452-3461.
    • (2000) Nucleic Acids Res. , vol.28 , pp. 3452-3461
    • Schnare, M.1    Collings, J.2    Spencer, D.3    Gray, M.4
  • 26
    • 0029881485 scopus 로고    scopus 로고
    • Structural and functional characterization of Leishmania amazonensis ribosomal RNA promoter
    • Uliana S, Fischer W, Stempliuk V, Floeter-Winter L. Structural and functional characterization of Leishmania amazonensis ribosomal RNA promoter. Mol. Biochem. Parasitol. 1996, 76:245-255.
    • (1996) Mol. Biochem. Parasitol. , vol.76 , pp. 245-255
    • Uliana, S.1    Fischer, W.2    Stempliuk, V.3    Floeter-Winter, L.4
  • 27
    • 0023045658 scopus 로고
    • Three small RNAs within the 10kb trypanosome rRNA transcription unit are analogous to Domain VII of other eukaryotic 28S rRNAs
    • White T, Rudenko G, Borst P. Three small RNAs within the 10kb trypanosome rRNA transcription unit are analogous to Domain VII of other eukaryotic 28S rRNAs. Nucleic Acids Res. 1986, 14:9471-9489.
    • (1986) Nucleic Acids Res. , vol.14 , pp. 9471-9489
    • White, T.1    Rudenko, G.2    Borst, P.3
  • 28
    • 0032886109 scopus 로고    scopus 로고
    • Characterization of the Leishmania donovani ribosomal RNA promoter
    • Yan S, Lodes M, Fox M, Myler P, Stuart K. Characterization of the Leishmania donovani ribosomal RNA promoter. Mol. Biochem. Parasitol. 1999, 103:197-210.
    • (1999) Mol. Biochem. Parasitol. , vol.103 , pp. 197-210
    • Yan, S.1    Lodes, M.2    Fox, M.3    Myler, P.4    Stuart, K.5
  • 29
    • 0042121256 scopus 로고    scopus 로고
    • Mfold web server for nucleic acid folding and hybridization prediction
    • Zuker M. Mfold web server for nucleic acid folding and hybridization prediction. Nucleic Acids Res. 2003, 31:3406-3415.
    • (2003) Nucleic Acids Res. , vol.31 , pp. 3406-3415
    • Zuker, M.1


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.