Kineosporia mesophila sp. nov., isolated from surface-sterilized stems of Tripterygium wilfordii

International Journal of Systematic and Evolutionary Microbiology

Volumn 59, Issue 12, 2009, Pages 3150-3154

  Li, Jie ^a,c   Zhao, Guo Zhen ^a,c   Huang, Hai Yu ^a,c   Qin, Sheng ^a,c   Zhu, Wen Yong ^a,c   Xu, Li Hua ^a,c   Li, Wen Jun ^a,b,c  

^a BEIJING UNIVERSITY OF POSTS AND TELECOMMUNICATIONS   (China)

^b SOUTH CHINA SEA INSTITUTE OF OCEANOLOGY   (China)

^c YUNNAN UNIVERSITY   (China)

Author keywords

[No Author keywords available]

Indexed keywords

RNA 16S;

ACTINOBACTERIA; ARTICLE; BACTERIAL STRAIN; BACTERIUM IDENTIFICATION; BACTERIUM ISOLATE; CONTROLLED STUDY; DNA DNA HYBRIDIZATION; GENETIC DIFFERENCE; GENETIC SIMILARITY; KINEOSPORIA MESOPHILA; MORPHOLOGY; NEW SPECIES; NONHUMAN; NUCLEOTIDE SEQUENCE; PHENOTYPIC VARIATION; PHYLOGENY; PLANT; PLANT STEM; PRIORITY JOURNAL; SEQUENCE ANALYSIS; TRIPTERIGIUM WILFORDII;

ACTINOMYCETALES; DNA, BACTERIAL; DNA, RIBOSOMAL; MOLECULAR SEQUENCE DATA; PHYLOGENY; PLANT STEMS; RNA, RIBOSOMAL, 16S; TRIPTERYGIUM;

KINEOSPORIA; TRIPTERYGIUM WILFORDII;

EID: 72149130548     PISSN: 14665026     EISSN: None     Source Type: Journal    
DOI: 10.1099/ijs.0.012021-0     Document Type: Article

References (31)

1. Collins, M. D. & Jones, D. (1980). Lipids in the classification and identification of coryneform bacteria containing peptidoglycans based on 2,4-diaminobutyric acid. J Appl Bacteriol 48, 459-470.
2. Collins, M. D., Pirouz, T., Goodfellow, M. & Minnikin, D. E. (1977). Distribution of menaquinones in actinomycetes and corynebacteria. J Gen Microbiol 100, 221-230.
3. Coombs, J. T. & Franco, C. M. M. (2003). Isolation and identification of actinobacteria from surface-sterilized wheat roots. Appl Environ Microbiol 69, 5603-5608.
4. Eke, M. A., Alderson, G. & Cross, T. (1989). An actinomycete that changes wall composition during sporulation. Lett Appl Microbiol 9, 1-4.
5. Ezaki, T., Hashimoto, Y. & Yabuuchi, E. (1989). Fluorometric deoxyribonucleic acid-deoxyribonucleic acid hybridization in microdilution wells as an alternative to membrane filter hybridization in which radioisotopes are used to determine genetic relatedness among bacterial strains. Int J Syst Bacteriol 39, 224-229.
6. Felsenstein, J. (1985). Confidence limits on phylogenies: an approach using the bootstrap. Evolution 39, 783-791.
7. Gordon, R. E., Barnett, D. A., Handerhan, J. E. & Pang, C. H.-N. (1974). Nocardia coeliaca, Nocardia autotrophica, and the nocardin strain. Int J Syst Bacteriol 24, 54-63.
8. He, L., Li, W., Huang, Y., Wang, L. M., Liu, Z. H., Lanoot, B. J., Vancanneyt, M. & Swings, J. (2005). Streptomyces jietaisiensis sp. nov., isolated from soil in northern China. Int J Syst Evol Microbiol 55, 1939-1944.
9. Itoh, T., Kudo, T., Parenti, F. & Seino, A. (1989). Amended description of the genus Kineosporia, based on chemotaxonomic and morphological studies. Int J Syst Bacteriol 39, 168-173.
10. Kelly, K. L. (1964). Inter-Society Color Council - National Bureau of Standards Color Name Charts Illustrated with Centroid Colors. Washington, DC: US Government Printing Office.
11. Kimura, M. (1983). The Neutral Theory of Molecular Evolution. Cambridge: Cambridge University Press.
12. Kudo, T., Matsushima, K., Itoh, T., Sasaki, J. & Suzuki, K. (1998). Description of four new species of the genus Kineosporia: Kineosporia succinea sp. nov., Kineosporia rhizophila sp. nov., Kineosporia mikuniensis sp. nov. and Kineosporia rhamnosa sp. nov., isolated from plant samples, and amended description of the genus Kineosporia. Int J Syst Bacteriol 48, 1245-1255.
13. Li, W. J., Xu, P., Schumann, P., Zhang, Y. Q., Pukall, R., Xu, L. H., Stackebrandt, E. & Jiang, C. L. (2007). Georgenia ruanii sp. nov., a novel actinobacterium isolated from forest soil in Yunnan (China) and emended description of the genus Georgenia. Int J Syst Evol Microbiol 57, 1424-1428.
14. Li, J., Zhao, G. Z., Qin, S., Zhu, W. Y., Xu, L. H. & Li, W. J. (2009). Streptomyces sedi sp. nov., isolated from a surface-sterilized tissue of Sedum sp. Int J Syst Evol Microbiol 59, 1492-1496.
15. Locci, R. (1989). Streptomyces and related genera. In Bergey's Manual of Systematic Bacteriology, vol. 4, pp. 2451-2508. Edited by S. T. Williams, M. E. Sharpe & J. G. Holt. Baltimore: Williams & Wilkins.
16. Mesbah, M., Premachandran, U. & Whitman, W. B. (1989). Precise measurement of the G+C content of deoxyribonucleic acid by high-performance liquid chromatography. Int J Syst Bacteriol 39, 159-167.
17. Minnikin, D. E., Collins, M. D. & Goodfellow, M. (1979). Fatty acid and polar lipid composition in the classification of Cellulomonas, Oerskovia and related taxa. J Appl Bacteriol 47, 87-95.
18. Pagani, H. & Parenti, F. (1978). Kineosporia, a new genus of the order Actinomycetales. Int J Syst Bacteriol 28, 401-406.
19. Saitou, N. & Nei, M. (1987). The neighbor-joining method: a new method for reconstructing phylogenetic trees. Mol Biol Evol 4, 406-425.
20. Sakiyama, Y., Thao, N. K. N., Giang, N. M., Miyadoh, S., Hop, D. V. & Andp, K. (2009). Kineosporia babensis sp. nov., isolated from plant litter in Vietnam. Int J Syst Evol Microbiol 59, 550-554.
21. Sasser, M. (1990). Identification of bacteria by gas chromatography of cellular fatty acids. USFCC Newsl 20, 16.
22. Schleifer, K. H. & Kandler, O. (1972). Peptidoglycan types of bacterial cell walls and their taxonomic implications. Bacteriol Rev 36, 407-477.
23. Shirling, E. B. & Gottlieb, D. (1966). Methods for characterization of Streptomyces species. Int J Syst Bacteriol 16, 313-340.
24. Stackebrandt, E. & Goebel, B. M. (1994). Taxonomic note: a place for DNA-DNA reassociation and 16S rRNA sequence analysis in the present species definition in bacteriology. Int J Syst Bacteriol 44, 846-849.
25. Staneck, J. L. & Roberts, G. D. (1974). Simplified approach to identification of aerobic actinomycetes by thin layer chromatography. Appl Microbiol 28, 226-231.
26. Tamaoka, J., Katayama-Fujimura, Y. & Kuraishi, H. (1983). Analysis of bacterial menaquinone mixtures by high performance liquid chromatography. J Appl Bacteriol 54, 31-36.
27. Tamura, K., Dudley, J., Nei, M. & Kumar, S. (2007). MEGA4: Molecular evolutionary genetics analysis (MEGA) software version 4.0. Mol Biol Evol 24, 1596-1599.
28. Tang, S. K., Wang, Y., Lou, K., Mao, P. H., Xu, L. H., Jiang, C. L., Kim, C. J. & Li, W. J. (2009). Kocuria halotolerans sp. nov., a novel actinobacterium isolated from a saline soil in China. Int J Syst Evol Microbiol 59, 1316-1320.
29. Thompson, J. D., Gibson, T. J., Plewniak, F., Jeanmougin, F. & Higgins, D. G. (1997). The CLUSTAL_X windows interface: flexible strategies for multiple sequence alignment aided by quality analysis tools. Nucleic Acids Res 25, 4876-4882.
30. Waksman, S. A. (1961). The Actinomycetes, vol. 2. Baltimore: Williams & Wilkins.
31. AL. In Bergey's Manual of Systematic Bacteriology, vol. 4, pp. 2452-2492. Edited by S. T. Williams, M. E. Sharpe & J. G. Holt. Baltimore: Williams & Wilkins.