-
1
-
-
0033655445
-
Integration of antagonistic signals in the regulation of nitrogen assimilation in Escherichia coli
-
Ninfa A.J., Jiang P., Atkinson M.R., and Peliska J.A. Integration of antagonistic signals in the regulation of nitrogen assimilation in Escherichia coli. Curr. Top. Cell. Regul. 36 (2000) 31-75
-
(2000)
Curr. Top. Cell. Regul.
, vol.36
, pp. 31-75
-
-
Ninfa, A.J.1
Jiang, P.2
Atkinson, M.R.3
Peliska, J.A.4
-
2
-
-
0242276682
-
Nitrogen assimilation and global regulation in Escherichia coli
-
Reitzer L. Nitrogen assimilation and global regulation in Escherichia coli. Annu. Rev. Microbiol. 57 (2003) 155-176
-
(2003)
Annu. Rev. Microbiol.
, vol.57
, pp. 155-176
-
-
Reitzer, L.1
-
3
-
-
0031752273
-
Pathway choice in glutamate synthesis in Escherichia coli
-
Helling R.B. Pathway choice in glutamate synthesis in Escherichia coli. J. Bacteriol. 180 (1998) 4571-4575
-
(1998)
J. Bacteriol.
, vol.180
, pp. 4571-4575
-
-
Helling, R.B.1
-
5
-
-
0030722640
-
Glycolytic flux is conditionally correlated with ATP concentration in Saccharomyces cerevisiae: a chemostat study under carbon- or nitrogen-limiting conditions
-
Larsson C., Nilsson A., Blomberg A., and Gustafsson L. Glycolytic flux is conditionally correlated with ATP concentration in Saccharomyces cerevisiae: a chemostat study under carbon- or nitrogen-limiting conditions. J. Bacteriol. 179 (1997) 7243-7250
-
(1997)
J. Bacteriol.
, vol.179
, pp. 7243-7250
-
-
Larsson, C.1
Nilsson, A.2
Blomberg, A.3
Gustafsson, L.4
-
6
-
-
0035209302
-
Bacillus subtilis metabolism and energetic in carbon-limited and excess-carbon chemostat culture
-
Dauner M., Storni T., and Sauer U. Bacillus subtilis metabolism and energetic in carbon-limited and excess-carbon chemostat culture. J. Bacteriol. 183 (2001) 7308-7317
-
(2001)
J. Bacteriol.
, vol.183
, pp. 7308-7317
-
-
Dauner, M.1
Storni, T.2
Sauer, U.3
-
7
-
-
0037474301
-
The genome-wide transcriptional responses of Saccharomyces cerevisiae grown on glucose in aerobic chemostat cultures limited for carbon, nitrogen, phosphorus, or sulfur
-
Boer V.M., de Winde J.H., Pronk J.T., and Piper M.D.W. The genome-wide transcriptional responses of Saccharomyces cerevisiae grown on glucose in aerobic chemostat cultures limited for carbon, nitrogen, phosphorus, or sulfur. J. Biol. Chem. 278 (2003) 3265-3274
-
(2003)
J. Biol. Chem.
, vol.278
, pp. 3265-3274
-
-
Boer, V.M.1
de Winde, J.H.2
Pronk, J.T.3
Piper, M.D.W.4
-
8
-
-
14244270260
-
Analysis of gene expression in Escherichia coli in response to changes of growth-limiting nutrient in chemostat cultures
-
Hua Q., Yang C., Oshima T., Mori H., and Shimizu K. Analysis of gene expression in Escherichia coli in response to changes of growth-limiting nutrient in chemostat cultures. Appl. Environ. Microbiol. 70 (2004) 2354-2366
-
(2004)
Appl. Environ. Microbiol.
, vol.70
, pp. 2354-2366
-
-
Hua, Q.1
Yang, C.2
Oshima, T.3
Mori, H.4
Shimizu, K.5
-
9
-
-
0343051880
-
Poly(3-hydroxybutyrate) production with high productivity and high polymer content by a fed-batch culture of Alcaligenes lattus under nitro gen-limitation
-
Wang F., and Lee S.Y. Poly(3-hydroxybutyrate) production with high productivity and high polymer content by a fed-batch culture of Alcaligenes lattus under nitro gen-limitation. Appl. Environ. Microbiol. 63 (1997) 3703-3706
-
(1997)
Appl. Environ. Microbiol.
, vol.63
, pp. 3703-3706
-
-
Wang, F.1
Lee, S.Y.2
-
10
-
-
33644642851
-
Effect of nitrogen limitation on the ergosterol production by fed-batch culture of Saccharomyces cerevisiae
-
Shang F., Wen S., Wang X., and Tan T. Effect of nitrogen limitation on the ergosterol production by fed-batch culture of Saccharomyces cerevisiae. J. Biotechnol. 122 (2006) 285-292
-
(2006)
J. Biotechnol.
, vol.122
, pp. 285-292
-
-
Shang, F.1
Wen, S.2
Wang, X.3
Tan, T.4
-
11
-
-
0034687819
-
Nitrogen regulatory protein C-controlled genes of Escherichia coli: scavenging as a defense against nitrogen limitation
-
Zimmer D.P., Soupene E., Lee H.L., Wendisch V.F., Khodursky A.B., Peter B.J., Bender R.A., and Kustu S. Nitrogen regulatory protein C-controlled genes of Escherichia coli: scavenging as a defense against nitrogen limitation. Proc. Natl. Acad. Sci. U.S.A. 97 (2000) 14674-21467
-
(2000)
Proc. Natl. Acad. Sci. U.S.A.
, vol.97
, pp. 14674-21467
-
-
Zimmer, D.P.1
Soupene, E.2
Lee, H.L.3
Wendisch, V.F.4
Khodursky, A.B.5
Peter, B.J.6
Bender, R.A.7
Kustu, S.8
-
12
-
-
0345529074
-
Response of the central metabolism in Escherichia coli to phosphoglucose isomerase and glucose-6-phosphate dehydrogenase knockouts
-
Hua Q., Yang C., Baba T., Mori H., and Shimizu K. Response of the central metabolism in Escherichia coli to phosphoglucose isomerase and glucose-6-phosphate dehydrogenase knockouts. J. Bacteriol. 185 (2003) 7053-7067
-
(2003)
J. Bacteriol.
, vol.185
, pp. 7053-7067
-
-
Hua, Q.1
Yang, C.2
Baba, T.3
Mori, H.4
Shimizu, K.5
-
13
-
-
31544450286
-
Construction of Escherichia coli K-12 in-frame, single-gene knockout mutants: the Keio collection
-
10.1038/msb41000050
-
Baba T., Ara T., Hasegawa M., Takai Y., Okumura Y., Baba M., Datsenko K.A., Tomita M., Wanner B.L., and Mori H. Construction of Escherichia coli K-12 in-frame, single-gene knockout mutants: the Keio collection. Mol. Syst. Biol. 2 (2006) 10.1038/msb41000050
-
(2006)
Mol. Syst. Biol.
, vol.2
-
-
Baba, T.1
Ara, T.2
Hasegawa, M.3
Takai, Y.4
Okumura, Y.5
Baba, M.6
Datsenko, K.A.7
Tomita, M.8
Wanner, B.L.9
Mori, H.10
-
14
-
-
0034612342
-
One step activation of chromosomal genes in Escherichia coli K-12 using PCR product
-
Datsenko K.A., and Wanner B.L. One step activation of chromosomal genes in Escherichia coli K-12 using PCR product. Proc. Natl. Acad. Sci. U.S.A. 97 (2000) 6640-6645
-
(2000)
Proc. Natl. Acad. Sci. U.S.A.
, vol.97
, pp. 6640-6645
-
-
Datsenko, K.A.1
Wanner, B.L.2
-
15
-
-
33745210122
-
Effect of rpoS gene knockout on the metabolism of Escherichia coli during exponential growth phase and early stationary phase based on gene expression, enzyme activities and intracellular metabolite concentrations
-
Rahman M., Hasan M.R., Oba T., and Shimizu K. Effect of rpoS gene knockout on the metabolism of Escherichia coli during exponential growth phase and early stationary phase based on gene expression, enzyme activities and intracellular metabolite concentrations. Biotechnol. Bioeng. 94 (2006) 585-595
-
(2006)
Biotechnol. Bioeng.
, vol.94
, pp. 585-595
-
-
Rahman, M.1
Hasan, M.R.2
Oba, T.3
Shimizu, K.4
-
17
-
-
0141429051
-
Gene expression patterns for metabolic pathway in pgi knockout Escherichia coli with and without phb genes based on RT-PCR
-
Kabir M.M., and Shimizu K. Gene expression patterns for metabolic pathway in pgi knockout Escherichia coli with and without phb genes based on RT-PCR. J. Biotechnol. 105 (2003) 11-31
-
(2003)
J. Biotechnol.
, vol.105
, pp. 11-31
-
-
Kabir, M.M.1
Shimizu, K.2
-
18
-
-
52049107371
-
Effects of arcA and arcB genes knock-out on the metabolism in Escherichia coli under anaerobic and microaerobic conditions
-
Nizam S.A., and Shimizu K. Effects of arcA and arcB genes knock-out on the metabolism in Escherichia coli under anaerobic and microaerobic conditions. Biochem. Eng. J. 42 (2008) 229-236
-
(2008)
Biochem. Eng. J.
, vol.42
, pp. 229-236
-
-
Nizam, S.A.1
Shimizu, K.2
-
19
-
-
0037391699
-
Global metabolic regulation analysis for Escherichia coli K-12 based on protein expression by 2D electrophoresis and enzyme activity measurement
-
Peng L., and Shimizu K. Global metabolic regulation analysis for Escherichia coli K-12 based on protein expression by 2D electrophoresis and enzyme activity measurement. Appl. Microbiol. Biotechnol. 61 (2003) 163-178
-
(2003)
Appl. Microbiol. Biotechnol.
, vol.61
, pp. 163-178
-
-
Peng, L.1
Shimizu, K.2
-
20
-
-
0029018721
-
Metabolic sources of hydrogen peroxide in aerobically growing Escherichia coli
-
Gonzalez-Flecha B., and Demple B. Metabolic sources of hydrogen peroxide in aerobically growing Escherichia coli. J. Biol. Chem. 270 (1995) 13681-13687
-
(1995)
J. Biol. Chem.
, vol.270
, pp. 13681-13687
-
-
Gonzalez-Flecha, B.1
Demple, B.2
-
22
-
-
33646141853
-
Investigation into the effect of soxR and soxS genes deletion on the central metabolism of Escherichia coli based on gene expressions and enzyme activities
-
Kabir M.M., and Shimizu K. Investigation into the effect of soxR and soxS genes deletion on the central metabolism of Escherichia coli based on gene expressions and enzyme activities. Biochem. Eng. J. 30 (2006) 39-47
-
(2006)
Biochem. Eng. J.
, vol.30
, pp. 39-47
-
-
Kabir, M.M.1
Shimizu, K.2
-
24
-
-
0000060736
-
Ammonia assimilation and the biosynthesis of glutamine, glutamate, aspartate, asparagines, l-alanine, and d-alanine
-
Neidhart R., Curtiss III R., Ingraham J.L., Lin E.C.C., Low K.B., Masagnik B., Reznikoff W.S., Riley M., Schaechter M., and Umbarger H.E. (Eds), ASM Press, Washington DC
-
Reitzer L.J. Ammonia assimilation and the biosynthesis of glutamine, glutamate, aspartate, asparagines, l-alanine, and d-alanine. In: Neidhart R., Curtiss III R., Ingraham J.L., Lin E.C.C., Low K.B., Masagnik B., Reznikoff W.S., Riley M., Schaechter M., and Umbarger H.E. (Eds). Escherichia coli and Salmonella: Cellular and Molecular Biology. second ed. (1996), ASM Press, Washington DC 391-407
-
(1996)
Escherichia coli and Salmonella: Cellular and Molecular Biology. second ed.
, pp. 391-407
-
-
Reitzer, L.J.1
-
25
-
-
0018183277
-
Cascade control of Escherichia coli glutamine synthetase. II. Metabolite regulation of the enzymes in the cascade
-
Engleman E.G., and Francis S.H. Cascade control of Escherichia coli glutamine synthetase. II. Metabolite regulation of the enzymes in the cascade. Arch. Biochem. Biophys. 191 (1978) 602-612
-
(1978)
Arch. Biochem. Biophys.
, vol.191
, pp. 602-612
-
-
Engleman, E.G.1
Francis, S.H.2
-
26
-
-
0025035371
-
DNA-looping and enhancer activity: association between DNA-bound NtrC activator and RNA polymerase at the bacterial glnA promoter
-
Su W., Porter S., Kustu S., and Echols H. DNA-looping and enhancer activity: association between DNA-bound NtrC activator and RNA polymerase at the bacterial glnA promoter. Proc. Natl. Acad. Sci. U.S.A. 87 (1990) 5504-5508
-
(1990)
Proc. Natl. Acad. Sci. U.S.A.
, vol.87
, pp. 5504-5508
-
-
Su, W.1
Porter, S.2
Kustu, S.3
Echols, H.4
-
27
-
-
0032190205
-
Transcriptional repression of gdhA in Escherichia coli is mediated by Nac protein
-
Camarena L., Poggio S., Garcia N., and Osorio A. Transcriptional repression of gdhA in Escherichia coli is mediated by Nac protein. FEMS Microbiol. Lett. 167 (1998) 51-56
-
(1998)
FEMS Microbiol. Lett.
, vol.167
, pp. 51-56
-
-
Camarena, L.1
Poggio, S.2
Garcia, N.3
Osorio, A.4
-
28
-
-
0036035414
-
Physiological role of the GlnK signal transduction protein of Escherichia coli: survival of nitrogen starvation
-
Blauwkamp T.A., and Ninfa A.J. Physiological role of the GlnK signal transduction protein of Escherichia coli: survival of nitrogen starvation. Mol. Microbiol. 46 (2002) 203-214
-
(2002)
Mol. Microbiol.
, vol.46
, pp. 203-214
-
-
Blauwkamp, T.A.1
Ninfa, A.J.2
-
29
-
-
34547148485
-
Protection of the glutamate pool concentration in enteric bacteria
-
Yan D. Protection of the glutamate pool concentration in enteric bacteria. Proc. Natl. Acad. Sci. U.S.A. 104 (2007) 9475-9480
-
(2007)
Proc. Natl. Acad. Sci. U.S.A.
, vol.104
, pp. 9475-9480
-
-
Yan, D.1
-
30
-
-
34548623183
-
Response of the central metabolism of Escherichia coli to modified expression of the gene encoding the glucose-6-phosphate dehydrogenase
-
Nicolas C.P., Kiefer P., Letisse F., Kromer J., Massou S., Soucaille P., Wittmann C., Lindley N.D., and Portais J.C. Response of the central metabolism of Escherichia coli to modified expression of the gene encoding the glucose-6-phosphate dehydrogenase. FEBS Lett. 581 (2007) 3771-3776
-
(2007)
FEBS Lett.
, vol.581
, pp. 3771-3776
-
-
Nicolas, C.P.1
Kiefer, P.2
Letisse, F.3
Kromer, J.4
Massou, S.5
Soucaille, P.6
Wittmann, C.7
Lindley, N.D.8
Portais, J.C.9
-
31
-
-
1342325419
-
The soluble and membrane-bound transhydrogenases UdhA and PntAB have divergent functions in NADPH metabolism of Escherichia coli
-
Sauer U., Canonaco F., Heri S., Perrenoud A., and Fischer E. The soluble and membrane-bound transhydrogenases UdhA and PntAB have divergent functions in NADPH metabolism of Escherichia coli. J. Biochem. 279 (2004) 6613-6619
-
(2004)
J. Biochem.
, vol.279
, pp. 6613-6619
-
-
Sauer, U.1
Canonaco, F.2
Heri, S.3
Perrenoud, A.4
Fischer, E.5
-
32
-
-
0036302723
-
The glycolytic flux in Escherichia coli is controlled by the demand for ATP
-
Koebmann B.J., Westerhoff H.V., Snoep J.L., Nilsson D., and Jensen P.R. The glycolytic flux in Escherichia coli is controlled by the demand for ATP. J. Bacteriol. 184 (2002) 3909-3916
-
(2002)
J. Bacteriol.
, vol.184
, pp. 3909-3916
-
-
Koebmann, B.J.1
Westerhoff, H.V.2
Snoep, J.L.3
Nilsson, D.4
Jensen, P.R.5
|