Arc1p: Anchoring, routing, coordinating

FEBS Letters

Volumn 584, Issue 2, 2010, Pages 427-433

  Frechin, Mathieu ^a   Kern, Daniel ^a   Martin, Robert Pierre ^a   Becker, Hubert Dominique ^a   Senger, Bruno ^a  

^a UNIVERSITÉ DE STRASBOURG   (France)

Author keywords

Aminoacylation; Dual localization; Metabolism; Mitochondria; Saccharomyces cerevisiae; tRNA

Indexed keywords

AMINO ACID TRANSFER RNA LIGASE; AMINO ACID TRANSFER RNA LIGASE COFACTOR 1; AMINOACYL TRANSFER RNA; ARC1P PROTEIN; GLUTAMATE TRANSFER RNA LIGASE; METHIONINE TRANSFER RNA LIGASE; SACCHAROMYCES CEREVISIAE PROTEIN; TRANSFER RNA; UNCLASSIFIED DRUG;

ACCURACY; AMINOACYLATION; CARBON SOURCE; COMPLEX FORMATION; CONTROLLED STUDY; CYTOSOL; ENZYME ACTIVITY; ENZYME SYNTHESIS; GENETIC CODE; METABOLISM; MITOCHONDRION; NONHUMAN; PRIORITY JOURNAL; PROTEIN ANALYSIS; PROTEIN FUNCTION; REVIEW; RNA TRANSLATION; SACCHAROMYCES CEREVISIAE;

COENZYMES; CYTOSOL; GLUTAMATE-TRNA LIGASE; RNA, TRANSFER; RNA, TRANSFER, AMINO ACYL; RNA-BINDING PROTEINS; SACCHAROMYCES CEREVISIAE; SACCHAROMYCES CEREVISIAE PROTEINS; TRANSFER RNA AMINOACYLATION;

SACCHAROMYCES CEREVISIAE;

EID: 71849112369     PISSN: 00145793     EISSN: None     Source Type: Journal    
DOI: 10.1016/j.febslet.2009.11.037     Document Type: Review

References (44)

1. Kaminska M., Havrylenko S., Decottignies P., Gillet S., Le Marechal P., Negrutskii B., and Mirande M. Dissection of the structural organization of the aminoacyl-tRNA synthetase complex. J. Biol. Chem. 284 (2009) 6053-6060
2. Praetorius-Ibba M., Rogers T.E., Samson R., Kelman Z., and Ibba M. Association between archaeal prolyl- and leucyl-tRNA synthetases enhances tRNA(Pro) aminoacylation. J. Biol. Chem. 280 (2005) 26099-26104
3. Praetorius-Ibba M., Hausmann C.D., Paras M., Rogers T.E., and Ibba M. Functional association between three archaeal aminoacyl-tRNA synthetases. J. Biol. Chem. 282 (2007) 3680-3687
4. Ray P.S., Arif A., and Fox P.L. Macromolecular complexes as depots for releasable regulatory proteins. Trends Biochem. Sci. 32 (2007) 158-164
5. Hausmann C.D., and Ibba M. Aminoacyl-tRNA synthetase complexes: Molecular multitasking revealed. FEMS Microbiol. Rev. 32 (2008) 705-721
6. Simos G., Segref A., Fasiolo F., Hellmuth K., Shevchenko A., Mann M., and Hurt E.C. The yeast protein Arc1p binds to tRNA and functions as a cofactor for the methionyl- and glutamyl-tRNA synthetases. EMBO J. 15 (1996) 5437-5448
7. Deutscher M.P. Aminoacyl-tRNA synthetase complex from rat liver. Methods Enzymol. 29 (1974) 577-583
8. Negrutskii B.S., Stapulionis R., and Deutscher M.P. Supramolecular organization of the mammalian translation system. Proc. Natl. Acad. Sci. USA 91 (1994) 964-968
9. Hopper A.K., and Shaheen H.H. A decade of surprises for tRNA nuclear-cytoplasmic dynamics. Trends Cell Biol. 18 (2008) 98-104
10. Hurt E.C. A novel nucleoskeletal-like protein located at the nuclear periphery is required for the life cycle of Saccharomyces cerevisiae. EMBO J. 7 (1988) 4323-4334
11. Simos G., Tekotte H., Grosjean H., Segref A., Sharma K., Tollervey D., and Hurt E.C. Nuclear pore proteins are involved in the biogenesis of functional tRNA. EMBO J. 15 (1996) 2270-2284
12. Hopper A.K., Schultz L.D., and Shapiro R.A. Processing of intervening sequences: A new yeast mutant which fails to excise intervening sequences from precursor tRNAs. Cell 19 (1980) 741-751
13. Hellmuth K., Lau D.M., Bischoff F.R., Kunzler M., Hurt E., and Simos G. Yeast Los1p has properties of an exportin-like nucleocytoplasmic transport factor for tRNA. Mol. Cell Biol. 18 (1998) 6374-6386
14. Simader H., Hothorn M., Kohler C., Basquin J., Simos G., and Suck D. Structural basis of yeast aminoacyl-tRNA synthetase complex formation revealed by crystal structures of two binary sub-complexes. Nucleic Acids Res. 34 (2006) 3968-3979
15. Deinert K., Fasiolo F., Hurt E.C., and Simos G. Arc1p organizes the yeast aminoacyl-tRNA synthetase complex and stabilizes its interaction with the cognate tRNAs. J. Biol. Chem. 276 (2001) 6000-6008
16. Graindorge J.S., Senger B., Tritch D., Simos G., and Fasiolo F. Role of Arc1p in the modulation of yeast glutamyl-tRNA synthetase activity. Biochemistry 44 (2005) 1344-1352
17. Simos G., Sauer A., Fasiolo F., and Hurt E.C. A conserved domain within Arc1p delivers tRNA to aminoacyl-tRNA synthetases. Mol. Cell 1 (1998) 235-242
18. Galani K., Grosshans H., Deinert K., Hurt E.C., and Simos G. The intracellular location of two aminoacyl-tRNA synthetases depends on complex formation with Arc1p. EMBO J. 20 (2001) 6889-6898
19. Karanasios E., Simader H., Panayotou G., Suck D., and Simos G. Molecular determinants of the yeast Arc1p-aminoacyl-tRNA synthetase complex assembly. J. Mol. Biol. 374 (2007) 1077-1090
20. Swairjo M.A., Morales A.J., Wang C.C., Ortiz A.R., and Schimmel P. Crystal structure of trbp111: A structure-specific tRNA-binding protein. EMBO J. 19 (2000) 6287-6298
21. Ibba M., and Soll D. Aminoacyl-tRNA synthesis. Annu. Rev. Biochem. 69 (2000) 617-650
22. Karanasios E., Boleti H., and Simos G. Incorporation of the Arc1p tRNA-binding domain to the catalytic core of MetRS can functionally replace the yeast Arc1p-MetRS complex. J. Mol. Biol. 381 (2008) 763-771
23. McGuire A.T., and Mangroo D. Cex1p is a novel cytoplasmic component of the Saccharomyces cerevisiae nuclear tRNA export machinery. EMBO J. 26 (2007) 288-300
24. Strub B.R., Eswara M.B., Pierce J.B., and Mangroo D. Utp8p is a nucleolar tRNA-binding protein that forms a complex with components of the nuclear tRNA export machinery in Saccharomyces cerevisiae. Mol. Biol. Cell 18 (2007) 3845-3859
25. Kyriacou S.V., and Deutscher M.P. An important role for the multienzyme aminoacyl-tRNA synthetase complex in mammalian translation and cell growth. Mol. Cell 29 (2008) 419-427
26. Park S.G., Schimmel P., and Kim S. Aminoacyl tRNA synthetases and their connections to disease. Proc. Natl. Acad. Sci. USA 105 (2008) 11043-11049
27. Park S.G., Ewalt K.L., and Kim S. Functional expansion of aminoacyl-tRNA synthetases and their interacting factors: new perspectives on housekeepers. Trends Biochem. Sci. 30 (2005) 569-574
28. Arif A., Jia J., Mukhopadhyay R., Willard B., Kinter M., and Fox P.L. Two-site phosphorylation of EPRS coordinates multimodal regulation of noncanonical translational control activity. Mol. Cell 35 (2009) 164-180
29. Frechin M., Senger B., Braye M., Kern D., Martin R.P., and Becker H.D. Yeast mitochondrial Gln-tRNA(Gln) is generated by a GatFAB-mediated transamidation pathway involving Arc1p-controlled subcellular sorting of cytosolic GluRS. Genes Dev. 23 (2009) 1119-1130
30. Schon A., Kannangara C.G., Gough S., and Soll D. Protein biosynthesis in organelles requires misaminoacylation of tRNA. Nature 331 (1988) 187-190
31. Pujol C., Bailly M., Kern D., Marechal-Drouard L., Becker H., and Duchene A.M. Dual-targeted tRNA-dependent amidotransferase ensures both mitochondrial and chloroplastic Gln-tRNAGln synthesis in plants. Proc. Natl. Acad. Sci. USA 105 (2008) 6481-6485
32. Rinehart J., Krett B., Rubio M.A., Alfonzo J.D., and Soll D. Saccharomyces cerevisiae imports the cytosolic pathway for Gln-tRNA synthesis into the mitochondrion. Genes Dev. 19 (2005) 583-592
33. Zaman S., Lippman S.I., Zhao X., and Broach J.R. How Saccharomyces responds to nutrients. Annu. Rev. Genet. 42 (2008) 27-81
34. Galani K., Hurt E., and Simos G. The tRNA aminoacylation co-factor Arc1p is excluded from the nucleus by an Xpo1p-dependent mechanism. FEBS Lett. 579 (2005) 969-975
35. Kim H.S., Hoja U., Stolz J., Sauer G., and Schweizer E. Identification of the tRNA-binding protein Arc1p as a novel target of in vivo biotinylation in Saccharomyces cerevisiae. J. Biol. Chem. 279 (2004) 42445-42452
36. Pirner H.M., and Stolz J. Biotin sensing in Saccharomyces cerevisiae is mediated by a conserved DNA element and requires the activity of biotin-protein ligase. J. Biol. Chem. 281 (2006) 12381-12389
37. Beckett D. Biotin sensing: universal influence of biotin status on transcription. Annu. Rev. Genet. 41 (2007) 443-464
38. Frantz J.D., and Gilbert W. A novel yeast gene product, G4p1, with a specific affinity for quadruplex nucleic acids. J. Biol. Chem. 270 (1995) 20692-20697
39. Johnson J.E., Smith J.S., Kozak M.L., and Johnson F.B. In vivo veritas: using yeast to probe the biological functions of G-quadruplexes. Biochimie 90 (2008) 1250-1263
40. Rieger R.A., Zaika E.I., Xie W., Johnson F., Grollman A.P., Iden C.R., and Zharkov D.O. Proteomic approach to identification of proteins reactive for abasic sites in DNA. Mol. Cell Proteomics 5 (2006) 858-867
41. Fernandez-Murray J.P., and McMaster C.R. Identification of novel phospholipid binding proteins in Saccharomyces cerevisiae. FEBS Lett. 580 (2006) 82-86
42. Benko A.L., Vaduva G., Martin N.C., and Hopper A.K. Competition between a sterol biosynthetic enzyme and tRNA modification in addition to changes in the protein synthesis machinery causes altered nonsense suppression. Proc. Natl. Acad. Sci. USA 97 (2000) 61-66
43. Kabir M.A., and Sherman F. Overexpressed ribosomal proteins suppress defective chaperonins in Saccharomyces cerevisiae. FEMS Yeast Res. 8 (2008) 1236-1244
44. Mah A.S., Elia A.E., Devgan G., Ptacek J., Schutkowski M., Snyder M., Yaffe M.B., and Deshaies R.J. Substrate specificity analysis of protein kinase complex Dbf2-Mob1 by peptide library and proteome array screening. BMC Biochem. 6 (2005) 22