-
1
-
-
35848951876
-
Roles of cyclic diguanylate in the regulation of bacterial pathogenesis
-
Tamayo R., Pratt J.T., and Camilli A. Roles of cyclic diguanylate in the regulation of bacterial pathogenesis. Annu. Rev. Microbiol. 61 (2007) 131-148
-
(2007)
Annu. Rev. Microbiol.
, vol.61
, pp. 131-148
-
-
Tamayo, R.1
Pratt, J.T.2
Camilli, A.3
-
2
-
-
33845403359
-
Mechanisms of cyclic-di-GMP signaling in bacteria
-
Jenal U., and Malone J. Mechanisms of cyclic-di-GMP signaling in bacteria. Annu. Rev. Genet. 40 (2006) 385-407
-
(2006)
Annu. Rev. Genet.
, vol.40
, pp. 385-407
-
-
Jenal, U.1
Malone, J.2
-
3
-
-
33645894689
-
Cyclic di-GMP as a second messenger
-
Römling U., and Amikam D. Cyclic di-GMP as a second messenger. Curr. Opin. Microbiol. 9 (2006) 218-228
-
(2006)
Curr. Opin. Microbiol.
, vol.9
, pp. 218-228
-
-
Römling, U.1
Amikam, D.2
-
4
-
-
22644438480
-
C-di-GMP: the dawning of a novel bacterial signaling system
-
Römling U., Gomelsky M., and Galperin M. C-di-GMP: the dawning of a novel bacterial signaling system. Mol. Microbiol. 57 (2005) 629-639
-
(2005)
Mol. Microbiol.
, vol.57
, pp. 629-639
-
-
Römling, U.1
Gomelsky, M.2
Galperin, M.3
-
5
-
-
1842610464
-
Cyclic di-guanosine-monophosphate comes of age: a novel secondary messenger involved in modulating cell surface structures in bacteria?
-
Jenal U. Cyclic di-guanosine-monophosphate comes of age: a novel secondary messenger involved in modulating cell surface structures in bacteria?. Curr. Opin. Microbiol. 7 (2004) 185-191
-
(2004)
Curr. Opin. Microbiol.
, vol.7
, pp. 185-191
-
-
Jenal, U.1
-
6
-
-
1842451699
-
Cell cycle-dependent dynamic localization of a bacterial regulator with a novel di-guanylate cyclase output domain
-
Paul R., Weiser S., Amiot N.C., Chan C., Schirmer T., Giese B., and Jenal U. Cell cycle-dependent dynamic localization of a bacterial regulator with a novel di-guanylate cyclase output domain. Genes Dev. 18 (2004) 715-727
-
(2004)
Genes Dev.
, vol.18
, pp. 715-727
-
-
Paul, R.1
Weiser, S.2
Amiot, N.C.3
Chan, C.4
Schirmer, T.5
Giese, B.6
Jenal, U.7
-
7
-
-
10444268100
-
Globin-coupled sensors, protoglobins, and the last universal common ancestor
-
Freitas T.A.K., Saito J.A., Hou S., and Alam M. Globin-coupled sensors, protoglobins, and the last universal common ancestor. J. Inorg. Biochem. 99 (2005) 23-33
-
(2005)
J. Inorg. Biochem.
, vol.99
, pp. 23-33
-
-
Freitas, T.A.K.1
Saito, J.A.2
Hou, S.3
Alam, M.4
-
8
-
-
0141761124
-
The diversity of globin-coupled sensors
-
Freitas T.A.K., Hou S., and Alam M. The diversity of globin-coupled sensors. FEBS Lett. 552 (2003) 99-104
-
(2003)
FEBS Lett.
, vol.552
, pp. 99-104
-
-
Freitas, T.A.K.1
Hou, S.2
Alam, M.3
-
9
-
-
38049105509
-
Characterization of a globin-coupled oxygen sensor with a gene-regulating function
-
Thijs L., Vinck E., Bolli A., Trandafir F., Wan X., Hoogewijis D., Coletta M., Fago A., Weber R.E., van Doorslaer S., Ascenzi P., Alam M., Moens L., and Dewilde S. Characterization of a globin-coupled oxygen sensor with a gene-regulating function. J. Biol. Chem. 282 (2007) 37325-37340
-
(2007)
J. Biol. Chem.
, vol.282
, pp. 37325-37340
-
-
Thijs, L.1
Vinck, E.2
Bolli, A.3
Trandafir, F.4
Wan, X.5
Hoogewijis, D.6
Coletta, M.7
Fago, A.8
Weber, R.E.9
van Doorslaer, S.10
Ascenzi, P.11
Alam, M.12
Moens, L.13
Dewilde, S.14
-
10
-
-
0034598826
-
Myoglobin-like aerotaxis transducers in archaea and bacteria
-
Hou S., Larsen R.W., Boudko F., Riley C.W., Karatan E., Zimmer M., Ordal G.W., and Alam M. Myoglobin-like aerotaxis transducers in archaea and bacteria. Nature 403 (2000) 540-544
-
(2000)
Nature
, vol.403
, pp. 540-544
-
-
Hou, S.1
Larsen, R.W.2
Boudko, F.3
Riley, C.W.4
Karatan, E.5
Zimmer, M.6
Ordal, G.W.7
Alam, M.8
-
11
-
-
2942584862
-
Diversity in chemotaxis mechanisms among the bacteria and archaea
-
Szurmant H., and Ordal G.W. Diversity in chemotaxis mechanisms among the bacteria and archaea. Microbiol. Mol. Biol. Rev. 68 (2004) 301-319
-
(2004)
Microbiol. Mol. Biol. Rev.
, vol.68
, pp. 301-319
-
-
Szurmant, H.1
Ordal, G.W.2
-
12
-
-
45149083640
-
Metal-containing sensor proteins sensing diatomic gas molecules
-
Aono S. Metal-containing sensor proteins sensing diatomic gas molecules. Dalton Trans. 24 (2008) 3125-3248
-
(2008)
Dalton Trans.
, vol.24
, pp. 3125-3248
-
-
Aono, S.1
-
13
-
-
0037134550
-
Resonance Raman and ligand binding studies of the oxygen-sensing signal transducer protein HemAT from Bacillus subtilis
-
Aono S., Kato T., Matsuki M., Nakajima H., Ohta T., Uchida T., and Kitagawa T. Resonance Raman and ligand binding studies of the oxygen-sensing signal transducer protein HemAT from Bacillus subtilis. J. Biol. Chem. 277 (2002) 13528-13538
-
(2002)
J. Biol. Chem.
, vol.277
, pp. 13528-13538
-
-
Aono, S.1
Kato, T.2
Matsuki, M.3
Nakajima, H.4
Ohta, T.5
Uchida, T.6
Kitagawa, T.7
-
14
-
-
9444278384
-
Oxygen-sensing mechanism of HemAT from Bacillus subtilis: a resonance Raman spectroscopic study
-
Ohta T., Yoshimura H., Yoshioka S., Aono S., and Kitagawa T. Oxygen-sensing mechanism of HemAT from Bacillus subtilis: a resonance Raman spectroscopic study. J. Am. Chem. Soc. 126 (2004) 15000-15001
-
(2004)
J. Am. Chem. Soc.
, vol.126
, pp. 15000-15001
-
-
Ohta, T.1
Yoshimura, H.2
Yoshioka, S.3
Aono, S.4
Kitagawa, T.5
-
15
-
-
33746912769
-
Recognition and discrimination of gases by the oxygen-sensing signal transducer protein HemAT as revealed by FTIR spectroscopy
-
Pinakoulaki E., Yoshimura H., Yoshioka S., Aono S., and Varotsis C. Recognition and discrimination of gases by the oxygen-sensing signal transducer protein HemAT as revealed by FTIR spectroscopy. Biochemistry 45 (2006) 7763-7766
-
(2006)
Biochemistry
, vol.45
, pp. 7763-7766
-
-
Pinakoulaki, E.1
Yoshimura, H.2
Yoshioka, S.3
Aono, S.4
Varotsis, C.5
-
16
-
-
33745814412
-
2 sensing of the oxygen sensor protein HemAT from Bacillus subtilis
-
2 sensing of the oxygen sensor protein HemAT from Bacillus subtilis. Biochemistry 45 (2006) 8301-8307
-
(2006)
Biochemistry
, vol.45
, pp. 8301-8307
-
-
Yoshimura, H.1
Yoshioka, S.2
Kobayashi, K.3
Ohta, T.4
Uchida, T.5
Kubo, M.6
Kitagawa, T.7
Aono, S.8
-
17
-
-
33749504737
-
Two ligand-binding sites in the O2-sensing signal transducer HemAT: implications for ligand recognition/discrimination and signaling
-
Pinakoulaki E., Yoshimura H., Daskalakis V., Yoshioka S., Aono S., and Varotsis C. Two ligand-binding sites in the O2-sensing signal transducer HemAT: implications for ligand recognition/discrimination and signaling. Proc. Natl. Acad. Sci. U. S. A. 103 (2006) 14796-14801
-
(2006)
Proc. Natl. Acad. Sci. U. S. A.
, vol.103
, pp. 14796-14801
-
-
Pinakoulaki, E.1
Yoshimura, H.2
Daskalakis, V.3
Yoshioka, S.4
Aono, S.5
Varotsis, C.6
-
18
-
-
34247877483
-
The formation of hydrogen bond in the proximal heme pocket of HemAT-Bs upon ligand biding
-
Yoshimura H., Yoshioka S., Mizutani Y., and Aono S. The formation of hydrogen bond in the proximal heme pocket of HemAT-Bs upon ligand biding. Biochem. Biophys. Res. Commun. 357 (2007) 1053-1057
-
(2007)
Biochem. Biophys. Res. Commun.
, vol.357
, pp. 1053-1057
-
-
Yoshimura, H.1
Yoshioka, S.2
Mizutani, Y.3
Aono, S.4
-
19
-
-
43749094347
-
Protein conformation change of HemAT-Bs upon ligand binding probed by ultraviolet resonance Raman spectroscopy
-
El-Mashtoly S.F., Gu Y., Yoshimura H., Yoshioka S., Aono S., and Kitagawa T. Protein conformation change of HemAT-Bs upon ligand binding probed by ultraviolet resonance Raman spectroscopy. J. Biol. Chem. 283 (2008) 6942-6949
-
(2008)
J. Biol. Chem.
, vol.283
, pp. 6942-6949
-
-
El-Mashtoly, S.F.1
Gu, Y.2
Yoshimura, H.3
Yoshioka, S.4
Aono, S.5
Kitagawa, T.6
-
20
-
-
0001210494
-
Spectrophotometric studies. X. Structural interpretation of the spectra of cyanide, pyridine, and carbon monoxide derivatives of cytochrome c and hemoglobin
-
Drabkin D.L. Spectrophotometric studies. X. Structural interpretation of the spectra of cyanide, pyridine, and carbon monoxide derivatives of cytochrome c and hemoglobin. J. Biol. Chem. 146 (1942) 605-617
-
(1942)
J. Biol. Chem.
, vol.146
, pp. 605-617
-
-
Drabkin, D.L.1
-
21
-
-
0042703514
-
A facile synthesis of cyclic bis(3′-5′)diguanylic acid
-
Hayakawa Y., Nagata R., Hirata A., Hyodo M., and Kawai R. A facile synthesis of cyclic bis(3′-5′)diguanylic acid. Tetrahedron 59 (2003) 6465-6471
-
(2003)
Tetrahedron
, vol.59
, pp. 6465-6471
-
-
Hayakawa, Y.1
Nagata, R.2
Hirata, A.3
Hyodo, M.4
Kawai, R.5
-
22
-
-
0025049831
-
Alteration of sperm whale myoglobin heme axial ligation by site-directed mutagenesis
-
Egeberg K.D., Springer B.A., Martinis S.A., Sligar S.G., Morikis D., and Champion P.M. Alteration of sperm whale myoglobin heme axial ligation by site-directed mutagenesis. Biochemistry 29 (1990) 9783-9791
-
(1990)
Biochemistry
, vol.29
, pp. 9783-9791
-
-
Egeberg, K.D.1
Springer, B.A.2
Martinis, S.A.3
Sligar, S.G.4
Morikis, D.5
Champion, P.M.6
-
24
-
-
10644274523
-
Structural and functional properties of hemoglobins from unicellular organisms as revealed by resonance Raman spectroscopy
-
Egawa T., and Yeh S.R. Structural and functional properties of hemoglobins from unicellular organisms as revealed by resonance Raman spectroscopy. J. Inorg. Biochem. 99 (2005) 72-96
-
(2005)
J. Inorg. Biochem.
, vol.99
, pp. 72-96
-
-
Egawa, T.1
Yeh, S.R.2
-
25
-
-
24344498616
-
Mechanism for transduction of the ligand-binding signal in heme-based gas sensory proteins revealed by resonance Raman spectroscopy
-
Uchida T., and Kitagawa T. Mechanism for transduction of the ligand-binding signal in heme-based gas sensory proteins revealed by resonance Raman spectroscopy. Acc. Chem. Res. 38 (2005) 662-670
-
(2005)
Acc. Chem. Res.
, vol.38
, pp. 662-670
-
-
Uchida, T.1
Kitagawa, T.2
-
26
-
-
10444269414
-
CO as a vibrational probe of heme protein active sites
-
Spiro T.G., and Wasbotten I.H. CO as a vibrational probe of heme protein active sites. J. Inorg. Biochem. 99 (2005) 34-44
-
(2005)
J. Inorg. Biochem.
, vol.99
, pp. 34-44
-
-
Spiro, T.G.1
Wasbotten, I.H.2
-
27
-
-
0034141829
-
Origin of the anomalous Fe-CO stretching mode in the CO complex of Ascaris hemoglobin
-
Das T.K., Friedman J.M., Kloek A.P., Goldberg D.E., and Rousseau D.L. Origin of the anomalous Fe-CO stretching mode in the CO complex of Ascaris hemoglobin. Biochemistry 39 (2000) 837-842
-
(2000)
Biochemistry
, vol.39
, pp. 837-842
-
-
Das, T.K.1
Friedman, J.M.2
Kloek, A.P.3
Goldberg, D.E.4
Rousseau, D.L.5
-
28
-
-
0033613114
-
-
Couture M., Yeh S.R., Wittenberg B.A., Witternberg J.B., Ouellet Y., Rousseau D.L., and Guertin M. Proc. Natl. Acad. Sci. U. S. A. 96 (1999) 11223-11228
-
(1999)
Proc. Natl. Acad. Sci. U. S. A.
, vol.96
, pp. 11223-11228
-
-
Couture, M.1
Yeh, S.R.2
Wittenberg, B.A.3
Witternberg, J.B.4
Ouellet, Y.5
Rousseau, D.L.6
Guertin, M.7
-
29
-
-
0034695445
-
A cooperative binding hemoglobin from Mycobacterium tuberculosis. Stabilization of heme ligand by a distal tyrosine residue
-
Yeh S.R., Couture M., Ouellet Y., Guertin M., and Rousseau D.L. A cooperative binding hemoglobin from Mycobacterium tuberculosis. Stabilization of heme ligand by a distal tyrosine residue. J. Biol. Chem. 275 (2000) 1679-1684
-
(2000)
J. Biol. Chem.
, vol.275
, pp. 1679-1684
-
-
Yeh, S.R.1
Couture, M.2
Ouellet, Y.3
Guertin, M.4
Rousseau, D.L.5
-
30
-
-
33746224034
-
Ligand interaction in the distal heme pocket of Mycobacterium tuberculosis truncated hemoglobin N: roles of TyrB10 and GlnE11 residue
-
Ouellet Y., Milani M., Couture M., Bolognesi M., and Guertin M. Ligand interaction in the distal heme pocket of Mycobacterium tuberculosis truncated hemoglobin N: roles of TyrB10 and GlnE11 residue. Biochemistry 45 (2006) 8770-8781
-
(2006)
Biochemistry
, vol.45
, pp. 8770-8781
-
-
Ouellet, Y.1
Milani, M.2
Couture, M.3
Bolognesi, M.4
Guertin, M.5
-
31
-
-
0034700261
-
Ligand binding in the ferric and ferrous states of Paramecium hemoglobin
-
Das T.K., Weber R.E., Dewilde S., Wittenberg J.B., Wittenberg B.A., Yamauchi K., van Hauwaert M.L., Moens L., and Rousseau D.L. Ligand binding in the ferric and ferrous states of Paramecium hemoglobin. Biochemistry 39 (2000) 14330-14340
-
(2000)
Biochemistry
, vol.39
, pp. 14330-14340
-
-
Das, T.K.1
Weber, R.E.2
Dewilde, S.3
Wittenberg, J.B.4
Wittenberg, B.A.5
Yamauchi, K.6
van Hauwaert, M.L.7
Moens, L.8
Rousseau, D.L.9
-
32
-
-
33845278516
-
Is bound carbonyl linear or bent in heme proteins? Evidence from resonance Raman and infrared spectroscopic data
-
Li X.Y., and Spiro T.G. Is bound carbonyl linear or bent in heme proteins? Evidence from resonance Raman and infrared spectroscopic data. J. Am. Chem. Soc. 110 (1988) 6024-6033
-
(1988)
J. Am. Chem. Soc.
, vol.110
, pp. 6024-6033
-
-
Li, X.Y.1
Spiro, T.G.2
-
33
-
-
0032705302
-
Psychrophilic sulfate-reducing bacteria isolated from permanently cold arctic marine sediments: description of Desulfofrigus oceanense gen. nov., sp. nov., Desulfofrigus fragile sp. nov., Desulfofaba gelida gen. nov., sp. nov., Desulfotalea psychrophila gen. nov., sp. nov., and Desulfotalea arctica sp. nov
-
Knoblauch C., Sahm K., and Jørgensen B.B. Psychrophilic sulfate-reducing bacteria isolated from permanently cold arctic marine sediments: description of Desulfofrigus oceanense gen. nov., sp. nov., Desulfofrigus fragile sp. nov., Desulfofaba gelida gen. nov., sp. nov., Desulfotalea psychrophila gen. nov., sp. nov., and Desulfotalea arctica sp. nov. Int. J. Syst. Bacteriol. 49 (1999) 1631-1643
-
(1999)
Int. J. Syst. Bacteriol.
, vol.49
, pp. 1631-1643
-
-
Knoblauch, C.1
Sahm, K.2
Jørgensen, B.B.3
-
34
-
-
0035014383
-
Mechanisms of biofilm resistance to antimicrobial agent
-
Mah T.F., and O'Toole G.A. Mechanisms of biofilm resistance to antimicrobial agent. Trends Microbiol. 9 (2001) 34-39
-
(2001)
Trends Microbiol.
, vol.9
, pp. 34-39
-
-
Mah, T.F.1
O'Toole, G.A.2
-
35
-
-
0028549573
-
Observation of a new oxygen-isotope-sensitive Raman band for oxyhemoproteins and its implications in heme pocket structures
-
Hirota S., Ogura T., Appelman E.H., Shizawa-Itoh K., Yoshikawa S., and Kitagawa T. Observation of a new oxygen-isotope-sensitive Raman band for oxyhemoproteins and its implications in heme pocket structures. J. Am. Chem. Soc. 116 (1994) 10564-10570
-
(1994)
J. Am. Chem. Soc.
, vol.116
, pp. 10564-10570
-
-
Hirota, S.1
Ogura, T.2
Appelman, E.H.3
Shizawa-Itoh, K.4
Yoshikawa, S.5
Kitagawa, T.6
-
36
-
-
0024334934
-
Resonance Raman investigation of site-directed mutants of myoglobin: effects of distal histidine replacement
-
Morikis D., Champion P.M., Springer B.A., and Sligar S.G. Resonance Raman investigation of site-directed mutants of myoglobin: effects of distal histidine replacement. Biochemistry 28 (1989) 4791-4800
-
(1989)
Biochemistry
, vol.28
, pp. 4791-4800
-
-
Morikis, D.1
Champion, P.M.2
Springer, B.A.3
Sligar, S.G.4
-
37
-
-
0033551768
-
Iron coordination structures of oxygen sensor FixL characterized by Fe K-edge extended x-ray absorption fine structure and resonance Raman spectroscopy
-
Miyatake H., Mukai M., Adachi S., Nakamura H., Tamura K., Iizuka T., Shiro Y., Strange R.W., and Hasnain S.S. Iron coordination structures of oxygen sensor FixL characterized by Fe K-edge extended x-ray absorption fine structure and resonance Raman spectroscopy. J. Biol. Chem. 274 (1999) 2376-2384
-
(1999)
J. Biol. Chem.
, vol.274
, pp. 2376-2384
-
-
Miyatake, H.1
Mukai, M.2
Adachi, S.3
Nakamura, H.4
Tamura, K.5
Iizuka, T.6
Shiro, Y.7
Strange, R.W.8
Hasnain, S.S.9
-
38
-
-
0037117726
-
A comparative resonance Raman analysis of heme-binding PAS domains: heme iron coordination structure of the BjFixL, AxPEDA1, EcDOS, and MtDOS proteins
-
Tomita T., Gonzalez G., Chang A.L., Ikeda-Saito M., and Gilles-Gonzalez M.A. A comparative resonance Raman analysis of heme-binding PAS domains: heme iron coordination structure of the BjFixL, AxPEDA1, EcDOS, and MtDOS proteins. Biochemistry 41 (2002) 4819-4826
-
(2002)
Biochemistry
, vol.41
, pp. 4819-4826
-
-
Tomita, T.1
Gonzalez, G.2
Chang, A.L.3
Ikeda-Saito, M.4
Gilles-Gonzalez, M.A.5
-
39
-
-
34147117736
-
DevS, a heme-containing two-component oxygen sensor of Mycobacterium tuberculosis
-
Ioanoviciu A., Yukl E.T., Moio{cyrillic}nne-Loccoz P., and de Montellano P.R. DevS, a heme-containing two-component oxygen sensor of Mycobacterium tuberculosis. Biochemistry 46 (2007) 4250-4260
-
(2007)
Biochemistry
, vol.46
, pp. 4250-4260
-
-
Ioanoviciu, A.1
Yukl, E.T.2
Moionne-Loccoz, P.3
de Montellano, P.R.4
-
40
-
-
10344238965
-
Structural basis of activity and allosteric control of diguanylate cyclase
-
Chan C., Paul R., Samoray D., Amiot N.C., Giese B., Jenal U., and Schirmer T. Structural basis of activity and allosteric control of diguanylate cyclase. Proc. Natl. Acad. Sci. U. S. A. 101 (2004) 17084-17089
-
(2004)
Proc. Natl. Acad. Sci. U. S. A.
, vol.101
, pp. 17084-17089
-
-
Chan, C.1
Paul, R.2
Samoray, D.3
Amiot, N.C.4
Giese, B.5
Jenal, U.6
Schirmer, T.7
-
41
-
-
42949140533
-
Allosteric regulation of histidine kinase by their cognate response regulator determines cell fate
-
Paul R., Jaeger T., Abel S., Wiederkehr I., Folcher M., Biondi E.G., Laub M.T., and Jenal U. Allosteric regulation of histidine kinase by their cognate response regulator determines cell fate. Cell 133 (2008) 452-461
-
(2008)
Cell
, vol.133
, pp. 452-461
-
-
Paul, R.1
Jaeger, T.2
Abel, S.3
Wiederkehr, I.4
Folcher, M.5
Biondi, E.G.6
Laub, M.T.7
Jenal, U.8
|