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Volumn 43, Issue 19, 2009, Pages 4956-4966

Identifying human and livestock sources of fecal contamination in Kenya with host-specific Bacteroidales assays

Author keywords

Bacteroidales; Cryptosporidium spp; Fecal pollution; Kenya; Microbial source tracking; Quantitative PCR; River Njoro

Indexed keywords

AGRICULTURE; ANIMALS; CONTAMINATION; HEALTH RISKS; POLYMERASE CHAIN REACTION; RIVERS; RNA; SEWAGE; VETERINARY MEDICINE; WATERSHEDS;

EID: 71549121652     PISSN: 00431354     EISSN: None     Source Type: Journal    
DOI: 10.1016/j.watres.2009.07.028     Document Type: Article
Times cited : (85)

References (39)
  • 1
    • 38349138542 scopus 로고    scopus 로고
    • Evaluation of Bacteroides markers for the detection of human faecal pollution
    • Ahmed W., Stewart J., Powell D., and Gardner T. Evaluation of Bacteroides markers for the detection of human faecal pollution. Letters in Applied Microbiology 46 2 (2008) 237-242
    • (2008) Letters in Applied Microbiology , vol.46 , Issue.2 , pp. 237-242
    • Ahmed, W.1    Stewart, J.2    Powell, D.3    Gardner, T.4
  • 2
    • 71549153849 scopus 로고    scopus 로고
    • Standard Method for the Examination of Water and Wastewater, twenty-first ed
    • AWWA. Standard Method for the Examination of Water and Wastewater, twenty-first ed. American Water Works Association (2005)
    • (2005) American Water Works Association
    • AWWA1
  • 3
    • 38849139571 scopus 로고    scopus 로고
    • Land cover change assessment within Kenya's Mau forest region using remotely sensed data. African
    • 10.1111/j.1365-2028.2007.00806.x
    • Baldyga T.J., Miller S.N., Driese K.L., Gichaba C.M., and Sivanpillai R. Land cover change assessment within Kenya's Mau forest region using remotely sensed data. African. Journal of Ecology (2007) 10.1111/j.1365-2028.2007.00806.x
    • (2007) Journal of Ecology
    • Baldyga, T.J.1    Miller, S.N.2    Driese, K.L.3    Gichaba, C.M.4    Sivanpillai, R.5
  • 4
    • 0033774937 scopus 로고    scopus 로고
    • A PCR assay to discriminate human and ruminant feces on the basis of host differences in Bacteroides- Prevotella genes encoding 16S rRNA
    • Bernhard A.E., and Field K.G. A PCR assay to discriminate human and ruminant feces on the basis of host differences in Bacteroides- Prevotella genes encoding 16S rRNA. Applied and Environmental Microbiology 66 10 (2000) 4571-4574
    • (2000) Applied and Environmental Microbiology , vol.66 , Issue.10 , pp. 4571-4574
    • Bernhard, A.E.1    Field, K.G.2
  • 5
    • 0034126848 scopus 로고    scopus 로고
    • Identification of nonpoint sources of fecal pollution in coastal waters by using host-specific 16S ribosomal DNA genetic markers from fecal anaerobes
    • Bernhard A.E., and Field K.G. Identification of nonpoint sources of fecal pollution in coastal waters by using host-specific 16S ribosomal DNA genetic markers from fecal anaerobes. Applied and Environmental Microbiology 66 4 (2000) 1587-1594
    • (2000) Applied and Environmental Microbiology , vol.66 , Issue.4 , pp. 1587-1594
    • Bernhard, A.E.1    Field, K.G.2
  • 7
    • 4644301880 scopus 로고    scopus 로고
    • Rapid estimation of numbers of fecal Bacteroidetes by use of a quantitative PCR assay for 16S rRNA genes
    • Dick L.K., and Field K.G. Rapid estimation of numbers of fecal Bacteroidetes by use of a quantitative PCR assay for 16S rRNA genes. Applied and Environmental Microbiology 70 (2004) 5695-5697
    • (2004) Applied and Environmental Microbiology , vol.70 , pp. 5695-5697
    • Dick, L.K.1    Field, K.G.2
  • 8
    • 34547599998 scopus 로고    scopus 로고
    • Validation of host-specific Bacteriodales 16S rRNA genes as markers to determine the origin of faecal pollution in Atlantic Rim countries of the European Union
    • Gawler A.H., Beecher J.E., Brandao J., Carroll N.M., Falcao L., et al. Validation of host-specific Bacteriodales 16S rRNA genes as markers to determine the origin of faecal pollution in Atlantic Rim countries of the European Union. Water Research 41 16 (2007) 3780-3784
    • (2007) Water Research , vol.41 , Issue.16 , pp. 3780-3784
    • Gawler, A.H.1    Beecher, J.E.2    Brandao, J.3    Carroll, N.M.4    Falcao, L.5
  • 9
    • 0030623684 scopus 로고    scopus 로고
    • Cryptosporidiosis: an emerging highly infectious threat
    • Guerrant R.L. Cryptosporidiosis: an emerging highly infectious threat. Emerging Infectious Disease 3 1 (1997) 51-57
    • (1997) Emerging Infectious Disease , vol.3 , Issue.1 , pp. 51-57
    • Guerrant, R.L.1
  • 10
  • 13
    • 34547597968 scopus 로고    scopus 로고
    • 16S rRNA-based assays for quantitative detection of universal, human-, cow-, and dog-specific fecal Bacteroidales: a Bayesian approach
    • Kildare B.J., Leutenegger C.M., McSwain B.S., Bambic D., Rajal V.B., and Wuertz S. 16S rRNA-based assays for quantitative detection of universal, human-, cow-, and dog-specific fecal Bacteroidales: a Bayesian approach. Water Research 41 (2007) 3701-3715
    • (2007) Water Research , vol.41 , pp. 3701-3715
    • Kildare, B.J.1    Leutenegger, C.M.2    McSwain, B.S.3    Bambic, D.4    Rajal, V.B.5    Wuertz, S.6
  • 15
    • 33745153077 scopus 로고    scopus 로고
    • Development of Bacteroides 16S rRNA gene Taqman-based real-time PCR assays for estimation of total, human, and bovine fecal pollution in water
    • Layton A., McKay L., Williams D., Garrett V., Gentry R., and Saylor G. Development of Bacteroides 16S rRNA gene Taqman-based real-time PCR assays for estimation of total, human, and bovine fecal pollution in water. Applied and Environmental Microbiology 72 (2006) 4214-4224
    • (2006) Applied and Environmental Microbiology , vol.72 , pp. 4214-4224
    • Layton, A.1    McKay, L.2    Williams, D.3    Garrett, V.4    Gentry, R.5    Saylor, G.6
  • 16
    • 33746093508 scopus 로고    scopus 로고
    • Persistence of fecal indicator bacteria in Santa Monica Bay beach sediments
    • Lee C.M., Lin T.Y., Lin C.C., Kohbodi G.A., Bhattl A., Lee R., and Jay J.A. Persistence of fecal indicator bacteria in Santa Monica Bay beach sediments. Water Research 40 14 (2006) 2593-2602
    • (2006) Water Research , vol.40 , Issue.14 , pp. 2593-2602
    • Lee, C.M.1    Lin, T.Y.2    Lin, C.C.3    Kohbodi, G.A.4    Bhattl, A.5    Lee, R.6    Jay, J.A.7
  • 19
    • 33847312252 scopus 로고    scopus 로고
    • Quantification of host-specific Bacteroides- Prevotella 16S rRNA genetic markers for assessment of fecal pollution in freshwater
    • Okabe S., Okayama N., Savichtcheva O., and Ito T. Quantification of host-specific Bacteroides- Prevotella 16S rRNA genetic markers for assessment of fecal pollution in freshwater. Applied Microbiology and Biotechnology 74 4 (2007) 890-901
    • (2007) Applied Microbiology and Biotechnology , vol.74 , Issue.4 , pp. 890-901
    • Okabe, S.1    Okayama, N.2    Savichtcheva, O.3    Ito, T.4
  • 20
    • 33847715501 scopus 로고    scopus 로고
    • Validation of hollow fiber ultrafiltration and real time PCR using bacteriophage PP7 as surrogate for the quantification of viruses from water samples
    • Rajal V.B., McSwain B.S., Thompson D.E., Leutenegger C.M., Kildare B., and Wuertz S. Validation of hollow fiber ultrafiltration and real time PCR using bacteriophage PP7 as surrogate for the quantification of viruses from water samples. Water Research 41 (2007) 1411-1422
    • (2007) Water Research , vol.41 , pp. 1411-1422
    • Rajal, V.B.1    McSwain, B.S.2    Thompson, D.E.3    Leutenegger, C.M.4    Kildare, B.5    Wuertz, S.6
  • 22
    • 33747329331 scopus 로고    scopus 로고
    • Quantitative PCR method for sensitive detection of ruminant fecal pollution in freshwater and evaluation of this method in alpine karstic regions
    • Reischer G.H., Kasper D.C., Steinborn R., Mach R.L., and Farnleitner A.H. Quantitative PCR method for sensitive detection of ruminant fecal pollution in freshwater and evaluation of this method in alpine karstic regions. Applied Environmental Microbiology 72 8 (2006) 5610-5614
    • (2006) Applied Environmental Microbiology , vol.72 , Issue.8 , pp. 5610-5614
    • Reischer, G.H.1    Kasper, D.C.2    Steinborn, R.3    Mach, R.L.4    Farnleitner, A.H.5
  • 23
    • 33947640155 scopus 로고    scopus 로고
    • A quantitative real-time PCR assay for the highly sensitive and specific detection of human faecal influence in spring water from a large alpine catchment area
    • Reischer G.H., Kasper D.C., Steinborn R., Farnleitner A.H., and Mach R.L. A quantitative real-time PCR assay for the highly sensitive and specific detection of human faecal influence in spring water from a large alpine catchment area. Letters Applied Microbiology 44 4 (2007) 351-356
    • (2007) Letters Applied Microbiology , vol.44 , Issue.4 , pp. 351-356
    • Reischer, G.H.1    Kasper, D.C.2    Steinborn, R.3    Farnleitner, A.H.4    Mach, R.L.5
  • 24
    • 34547476651 scopus 로고    scopus 로고
    • Quo vadis source tracking? Towards a strategic framework for environmental monitoring of fecal pollution
    • Santo Domingo J.W., Bambic D.G., Edge T.A., and Wuertz S. Quo vadis source tracking? Towards a strategic framework for environmental monitoring of fecal pollution. Water Research 41 (2007) 3539-3552
    • (2007) Water Research , vol.41 , pp. 3539-3552
    • Santo Domingo, J.W.1    Bambic, D.G.2    Edge, T.A.3    Wuertz, S.4
  • 25
    • 34447310608 scopus 로고    scopus 로고
    • Frequent occurrence of the human-specific Bacteroides fecal marker at an open coast marine beach: relationship to waves, tides and traditional indicators
    • Santoro A.E., and Boehm A.B. Frequent occurrence of the human-specific Bacteroides fecal marker at an open coast marine beach: relationship to waves, tides and traditional indicators. Environmental Microbiology 9 8 (2007) 2038-2049
    • (2007) Environmental Microbiology , vol.9 , Issue.8 , pp. 2038-2049
    • Santoro, A.E.1    Boehm, A.B.2
  • 26
    • 34547421264 scopus 로고    scopus 로고
    • Relationships between Bacteroides 16S rRNA genetic markers and presence of bacterial enteric pathogens and conventional fecal indicators
    • Savichtcheva O., Okayama N., and Okabe S. Relationships between Bacteroides 16S rRNA genetic markers and presence of bacterial enteric pathogens and conventional fecal indicators. Water Research 41 16 (2007) 3615-3628
    • (2007) Water Research , vol.41 , Issue.16 , pp. 3615-3628
    • Savichtcheva, O.1    Okayama, N.2    Okabe, S.3
  • 27
    • 12744260019 scopus 로고    scopus 로고
    • Detection and quantification of the human-specific HF183 Bacteroides 16S rRNA genetic marker with real-time PCR for assessment of human faecal pollution in freshwater
    • Seurinck S., Defoirdt T., Verstraete W., and Siciliano S.D. Detection and quantification of the human-specific HF183 Bacteroides 16S rRNA genetic marker with real-time PCR for assessment of human faecal pollution in freshwater. Environmental Microbiology 7 2 (2005) 249-259
    • (2005) Environmental Microbiology , vol.7 , Issue.2 , pp. 249-259
    • Seurinck, S.1    Defoirdt, T.2    Verstraete, W.3    Siciliano, S.D.4
  • 28
    • 33745271405 scopus 로고    scopus 로고
    • Identification of human fecal pollution in a coastal area: a case study at Oostende (Belgium)
    • Seurinck S., Verstraete W., Verdievel M., and Siciliano S.D. Identification of human fecal pollution in a coastal area: a case study at Oostende (Belgium). Journal of Water Health 4 2 (2006) 167-175
    • (2006) Journal of Water Health , vol.4 , Issue.2 , pp. 167-175
    • Seurinck, S.1    Verstraete, W.2    Verdievel, M.3    Siciliano, S.D.4
  • 29
    • 33747359916 scopus 로고    scopus 로고
    • Basin-wide analysis of the dynamics of fecal contamination and fecal source identification in Tillamook Bay, Oregon
    • Shanks O.C., Nietch C., SimonichYounger M., Reynolds D., and Field K.G. Basin-wide analysis of the dynamics of fecal contamination and fecal source identification in Tillamook Bay, Oregon. Applied and Environmental Microbiology 72 8 (2006) 5537-5546
    • (2006) Applied and Environmental Microbiology , vol.72 , Issue.8 , pp. 5537-5546
    • Shanks, O.C.1    Nietch, C.2    SimonichYounger, M.3    Reynolds, D.4    Field, K.G.5
  • 31
    • 33645049299 scopus 로고    scopus 로고
    • Tools for investigating the environmental transmission of Cryptosporidium and Giardia infections in humans
    • Smith H.V., Caccio S.M., Tait A., McLauchlin J., and Thompson R.C.A. Tools for investigating the environmental transmission of Cryptosporidium and Giardia infections in humans. Trends in Parasitology 22 4 (2006) 160-167
    • (2006) Trends in Parasitology , vol.22 , Issue.4 , pp. 160-167
    • Smith, H.V.1    Caccio, S.M.2    Tait, A.3    McLauchlin, J.4    Thompson, R.C.A.5
  • 35
    • 71549135307 scopus 로고    scopus 로고
    • U.S. Geological Survey, 2006. Collection of water samples ver. 2.0, U.S. Geological Survey Techniques of Water-Resources Investigations, Book 9, Chap. A4, September 2006. Accessed November 28, 2007 at
    • U.S. Geological Survey, 2006. Collection of water samples (ver. 2.0): U.S. Geological Survey Techniques of Water-Resources Investigations, Book 9, Chap. A4, September 2006. Accessed November 28, 2007 at http://pubs.water.usgs.gov/twri9A4.
  • 36
    • 33947410785 scopus 로고    scopus 로고
    • Detection of Bacteroidales fecal indicators and the zoonotic pathogens E-Coli O157: H7, Salmonella, and Campylobacter in river water
    • Walters S.P., Gannon V.P.J., and Field K.G. Detection of Bacteroidales fecal indicators and the zoonotic pathogens E-Coli O157: H7, Salmonella, and Campylobacter in river water. Environmental Science & Technology 41 6 (2007) 1856-1862
    • (2007) Environmental Science & Technology , vol.41 , Issue.6 , pp. 1856-1862
    • Walters, S.P.1    Gannon, V.P.J.2    Field, K.G.3
  • 38
    • 1642515713 scopus 로고    scopus 로고
    • Cryptosporidium taxonomy: recent advances and implications for public health
    • Xiao L.H., Fayer R., Ryan U., and Upton S.J. Cryptosporidium taxonomy: recent advances and implications for public health. Clinical Microbiology Reviews 17 (2004) 72-97
    • (2004) Clinical Microbiology Reviews , vol.17 , pp. 72-97
    • Xiao, L.H.1    Fayer, R.2    Ryan, U.3    Upton, S.J.4
  • 39
    • 71549115852 scopus 로고    scopus 로고
    • 3M Microbiology, 2001. 3M™ Interpretation Guide: Petrifilm™ E. coli/Coliform Count Plate. 3M Mircobiology Products, St Paul, Minnesota. http://quiro.uab.es/workshopmrama/Petrifilm_E.coli-coliform_guide.pdf.
    • 3M Microbiology, 2001. 3M™ Interpretation Guide: Petrifilm™ E. coli/Coliform Count Plate. 3M Mircobiology Products, St Paul, Minnesota. http://quiro.uab.es/workshopmrama/Petrifilm_E.coli-coliform_guide.pdf.


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.