-
1
-
-
9944232531
-
A novel pestivirus associated with deaths in Pyrenean chamois (Rupicapra pyrenaica pyrenaica)
-
Arnal M., Fernandez-de-Luco D., Riba L., Maley M., Gilray J., Willoughby K., Vilcek S., and Nettleton P.F. A novel pestivirus associated with deaths in Pyrenean chamois (Rupicapra pyrenaica pyrenaica). J. Gen. Virol. 85 (2004) 3653-3657
-
(2004)
J. Gen. Virol.
, vol.85
, pp. 3653-3657
-
-
Arnal, M.1
Fernandez-de-Luco, D.2
Riba, L.3
Maley, M.4
Gilray, J.5
Willoughby, K.6
Vilcek, S.7
Nettleton, P.F.8
-
2
-
-
0031371067
-
Multiple sources of character information and the phylogeny of Hawaiian drosophilids
-
Baker R.H., and DeSalle R. Multiple sources of character information and the phylogeny of Hawaiian drosophilids. Syst. Biol. 46 (1997) 654-673
-
(1997)
Syst. Biol.
, vol.46
, pp. 654-673
-
-
Baker, R.H.1
DeSalle, R.2
-
3
-
-
0037708784
-
Genetic and antigenic characterization of novel pestivirus genotypes: implications for classification
-
Becher P., Avalos Ramirez R., Orlich M., Cedillo Rosales S., Konig M., Schweizer M., Stalder H., Schirrmeier H., and Thiel H.-J. Genetic and antigenic characterization of novel pestivirus genotypes: implications for classification. Virology 311 (2003) 96-104
-
(2003)
Virology
, vol.311
, pp. 96-104
-
-
Becher, P.1
Avalos Ramirez, R.2
Orlich, M.3
Cedillo Rosales, S.4
Konig, M.5
Schweizer, M.6
Stalder, H.7
Schirrmeier, H.8
Thiel, H.-J.9
-
4
-
-
0033568074
-
Genetic diversity of pestiviruses: identification of novel groups and implications for classification
-
Becher P., Orlich M., Kosmidou A., Konig M., Baroth M., and Thiel H.-J. Genetic diversity of pestiviruses: identification of novel groups and implications for classification. Virology 262 (1999) 64-71
-
(1999)
Virology
, vol.262
, pp. 64-71
-
-
Becher, P.1
Orlich, M.2
Kosmidou, A.3
Konig, M.4
Baroth, M.5
Thiel, H.-J.6
-
5
-
-
0030927079
-
Phylogenetic analysis of pestiviruses from domestic and wild ruminants
-
Becher P., Orlich M., Shannon A.D., Horner G., Konig M., and Thiel H.-J. Phylogenetic analysis of pestiviruses from domestic and wild ruminants. J. Gen. Virol. 78 (1997) 1357-1366
-
(1997)
J. Gen. Virol.
, vol.78
, pp. 1357-1366
-
-
Becher, P.1
Orlich, M.2
Shannon, A.D.3
Horner, G.4
Konig, M.5
Thiel, H.-J.6
-
6
-
-
26944496495
-
Genetic characterization of a caprine pestivirus as the first member of a putative novel pestivirus subgroup
-
De Mia G.M., Greiser-Wilke I., Feliziani F., Giammarioli M., and De Giuseppe A. Genetic characterization of a caprine pestivirus as the first member of a putative novel pestivirus subgroup. J. Vet. Med. B: Infect. Dis. Vet. Public Health 52 (2005) 206-210
-
(2005)
J. Vet. Med. B: Infect. Dis. Vet. Public Health
, vol.52
, pp. 206-210
-
-
De Mia, G.M.1
Greiser-Wilke, I.2
Feliziani, F.3
Giammarioli, M.4
De Giuseppe, A.5
-
7
-
-
0032805771
-
Corroboration among data sets in simultaneous analysis: hidden support for phylogenetic relationships among higher level artiodactyl taxa
-
Gatesy J., O'Grady P., and Baker R.H. Corroboration among data sets in simultaneous analysis: hidden support for phylogenetic relationships among higher level artiodactyl taxa. Cladistics 15 (1999) 271-313
-
(1999)
Cladistics
, vol.15
, pp. 271-313
-
-
Gatesy, J.1
O'Grady, P.2
Baker, R.H.3
-
8
-
-
0033499153
-
Analyzing large data sets in reasonable times: solutions for composite optima
-
Goloboff P.A. Analyzing large data sets in reasonable times: solutions for composite optima. Cladistics 15 (1999) 415-428
-
(1999)
Cladistics
, vol.15
, pp. 415-428
-
-
Goloboff, P.A.1
-
9
-
-
45749124657
-
TNT, a free program for phylogenetic analysis
-
Goloboff P.A., Farris J.S., and Nixon K.C. TNT, a free program for phylogenetic analysis. Cladistics 24 (2008) 774-786
-
(2008)
Cladistics
, vol.24
, pp. 774-786
-
-
Goloboff, P.A.1
Farris, J.S.2
Nixon, K.C.3
-
10
-
-
0242578620
-
A simple, fast, and accurate algorithm to estimate large phylogenies by maximum likelihood
-
Guindon S., and Gascuel O. A simple, fast, and accurate algorithm to estimate large phylogenies by maximum likelihood. Syst. Biol. 52 (2003) 696-704
-
(2003)
Syst. Biol.
, vol.52
, pp. 696-704
-
-
Guindon, S.1
Gascuel, O.2
-
11
-
-
33751253784
-
Recombination patterns in aphthoviruses mirror those found in other picornaviruses
-
Heath L., van der Walt E., Varsani A., and Martin D.P. Recombination patterns in aphthoviruses mirror those found in other picornaviruses. J. Virol. 80 (2006) 11827-11832
-
(2006)
J. Virol.
, vol.80
, pp. 11827-11832
-
-
Heath, L.1
van der Walt, E.2
Varsani, A.3
Martin, D.P.4
-
12
-
-
0028189715
-
Rapid characterization of new pestivirus strains by direct sequencing of PCR-amplified cDNA from the 5′ noncoding region
-
Hofmann M.A., Brechtbühl K., and Stäuber N. Rapid characterization of new pestivirus strains by direct sequencing of PCR-amplified cDNA from the 5′ noncoding region. Arch. Virol. 139 (1994) 217-229
-
(1994)
Arch. Virol.
, vol.139
, pp. 217-229
-
-
Hofmann, M.A.1
Brechtbühl, K.2
Stäuber, N.3
-
13
-
-
0037379673
-
Phylogeny estimation: traditional and Bayesian approaches
-
Holder M., and Lewis P.O. Phylogeny estimation: traditional and Bayesian approaches. Nat. Rev. Genet. 4 (2003) 275-284
-
(2003)
Nat. Rev. Genet.
, vol.4
, pp. 275-284
-
-
Holder, M.1
Lewis, P.O.2
-
14
-
-
0034849408
-
MRBAYES: Bayesian inference of phylogenetic trees
-
Huelsenbeck J.P., and Ronquist F. MRBAYES: Bayesian inference of phylogenetic trees. Bioinformatics 17 (2001) 754-755
-
(2001)
Bioinformatics
, vol.17
, pp. 754-755
-
-
Huelsenbeck, J.P.1
Ronquist, F.2
-
15
-
-
11144245282
-
Phylogenetic analysis of bovine pestiviruses: testing the evolution of clinical symptoms
-
Jones L.R., Cigliano M.M., Zandomeni R.O., and Weber E.L. Phylogenetic analysis of bovine pestiviruses: testing the evolution of clinical symptoms. Cladistics 20 (2004) 443-453
-
(2004)
Cladistics
, vol.20
, pp. 443-453
-
-
Jones, L.R.1
Cigliano, M.M.2
Zandomeni, R.O.3
Weber, E.L.4
-
16
-
-
0019296687
-
A simple method for estimating evolutionary rates of base substitutions through comparative studies of nucleotide sequences
-
Kimura M. A simple method for estimating evolutionary rates of base substitutions through comparative studies of nucleotide sequences. J. Mol. Evol. 16 (1980) 111-120
-
(1980)
J. Mol. Evol.
, vol.16
, pp. 111-120
-
-
Kimura, M.1
-
17
-
-
34748873170
-
Flaviviridae: the viruses and their replication
-
Knipe D.M., and Howley P.M. (Eds), Lippincott-Raven, Philadelphia, PA
-
Lindenbach B.D., Thiel H.-J., and Rice C.M. Flaviviridae: the viruses and their replication. In: Knipe D.M., and Howley P.M. (Eds). Fields Virology. 5th ed. vol. 1 (2007), Lippincott-Raven, Philadelphia, PA 1101-1152
-
(2007)
Fields Virology. 5th ed.
, vol.1
, pp. 1101-1152
-
-
Lindenbach, B.D.1
Thiel, H.-J.2
Rice, C.M.3
-
18
-
-
66649105171
-
Virus recovery and full-length sequence analysis of the atypical bovine pestivirus Th/04_KhonKaen
-
Liu L., Kampa J., Belák S., and Baule C. Virus recovery and full-length sequence analysis of the atypical bovine pestivirus Th/04_KhonKaen. Vet. Microbiol. 138 (2009) 62-68
-
(2009)
Vet. Microbiol.
, vol.138
, pp. 62-68
-
-
Liu, L.1
Kampa, J.2
Belák, S.3
Baule, C.4
-
19
-
-
60649116779
-
Phylogeny, classification and evolutionary insights into pestiviruses
-
Liu L., Xia H., Wahlberg N., Belák S., and Baule C. Phylogeny, classification and evolutionary insights into pestiviruses. Virology 385 (2009) 351-357
-
(2009)
Virology
, vol.385
, pp. 351-357
-
-
Liu, L.1
Xia, H.2
Wahlberg, N.3
Belák, S.4
Baule, C.5
-
20
-
-
0029933684
-
Classical swine fever virus diversity and evolution
-
Lowings P., Ibata G., Needham J., and Paton D. Classical swine fever virus diversity and evolution. J. Gen. Virol. 77 (1996) 1311-1321
-
(1996)
J. Gen. Virol.
, vol.77
, pp. 1311-1321
-
-
Lowings, P.1
Ibata, G.2
Needham, J.3
Paton, D.4
-
21
-
-
0032810549
-
Searching for most parsimonious trees with simulated evolutionary optimization
-
Moilanen A. Searching for most parsimonious trees with simulated evolutionary optimization. Cladistics 15 (1999) 39-50
-
(1999)
Cladistics
, vol.15
, pp. 39-50
-
-
Moilanen, A.1
-
22
-
-
39049114551
-
Identification of new genetic subtypes of bovine viral diarrhea virus genotype 1 isolated in Japan
-
Nagai M., Hayashi M., Itou M., Fukutomi T., Akashi H., Kida H., and Sakoda Y. Identification of new genetic subtypes of bovine viral diarrhea virus genotype 1 isolated in Japan. Virus Genes 36 (2008) 135-139
-
(2008)
Virus Genes
, vol.36
, pp. 135-139
-
-
Nagai, M.1
Hayashi, M.2
Itou, M.3
Fukutomi, T.4
Akashi, H.5
Kida, H.6
Sakoda, Y.7
-
24
-
-
0033504552
-
The parsimony ratchet, a new method for rapid parsimony analysis
-
Nixon K.C. The parsimony ratchet, a new method for rapid parsimony analysis. Cladistics 15 (1999) 407-414
-
(1999)
Cladistics
, vol.15
, pp. 407-414
-
-
Nixon, K.C.1
-
26
-
-
0027953871
-
Identification of a new group of bovine viral diarrhea virus strains associated with severe outbreaks and high mortalities
-
Pellerin C., van den Hurk J., Lecomte J., and Tussen P. Identification of a new group of bovine viral diarrhea virus strains associated with severe outbreaks and high mortalities. Virology 203 (1994) 260-268
-
(1994)
Virology
, vol.203
, pp. 260-268
-
-
Pellerin, C.1
van den Hurk, J.2
Lecomte, J.3
Tussen, P.4
-
27
-
-
33745348045
-
Higher level phylogeny of Satyrinae butterflies (Lepidoptera: Nymphalidae) based on DNA sequence data
-
Peña C., Wahlberg N., Weingartner E., Kodandaramaiah U., Nylin S., Freitas A.V., and Brower A.V. Higher level phylogeny of Satyrinae butterflies (Lepidoptera: Nymphalidae) based on DNA sequence data. Mol. Phylogenet. Evol. 40 (2006) 29-49
-
(2006)
Mol. Phylogenet. Evol.
, vol.40
, pp. 29-49
-
-
Peña, C.1
Wahlberg, N.2
Weingartner, E.3
Kodandaramaiah, U.4
Nylin, S.5
Freitas, A.V.6
Brower, A.V.7
-
28
-
-
0027949184
-
Segregation of bovine viral diarrhea virus into genotypes
-
Ridpath J.F., Bolin S.R., and Dubovi E.J. Segregation of bovine viral diarrhea virus into genotypes. Virology 205 (1994) 66-74
-
(1994)
Virology
, vol.205
, pp. 66-74
-
-
Ridpath, J.F.1
Bolin, S.R.2
Dubovi, E.J.3
-
29
-
-
0041386108
-
MrBayes 3: Bayesian phylogenetic inference under mixed models
-
Ronquist F., and Huelsenbeck J.P. MrBayes 3: Bayesian phylogenetic inference under mixed models. Bioinformatics 19 (2003) 1572-1574
-
(2003)
Bioinformatics
, vol.19
, pp. 1572-1574
-
-
Ronquist, F.1
Huelsenbeck, J.P.2
-
30
-
-
60649116776
-
Molecular biology of pestiviruses
-
Mettenleiter T.C., and Sobrino F. (Eds), Caister Academic Press, Norfolk, UK
-
Rümenapf T., and Thiel H.-J. Molecular biology of pestiviruses. In: Mettenleiter T.C., and Sobrino F. (Eds). Animal Viruses: Molecular Biology (2008), Caister Academic Press, Norfolk, UK 39-96
-
(2008)
Animal Viruses: Molecular Biology
, pp. 39-96
-
-
Rümenapf, T.1
Thiel, H.-J.2
-
31
-
-
9944248535
-
Genetic and antigenic characterization of an atypical pestivirus isolate, a putative member of a novel pestivirus species
-
Schirrmeier H., Strebelow G., Depner K., Hoffmann B., and Beer M. Genetic and antigenic characterization of an atypical pestivirus isolate, a putative member of a novel pestivirus species. J. Gen. Virol. 85 (2004) 3647-3652
-
(2004)
J. Gen. Virol.
, vol.85
, pp. 3647-3652
-
-
Schirrmeier, H.1
Strebelow, G.2
Depner, K.3
Hoffmann, B.4
Beer, M.5
-
33
-
-
0026711010
-
Estimation of the number of nucleotide substitutions when there are strong transition-transversion and G + C-content biases
-
Tamura K. Estimation of the number of nucleotide substitutions when there are strong transition-transversion and G + C-content biases. Mol. Biol. Evol. 9 (1992) 678-687
-
(1992)
Mol. Biol. Evol.
, vol.9
, pp. 678-687
-
-
Tamura, K.1
-
34
-
-
34547781750
-
MEGA4: Molecular Evolutionary Genetics Analysis (MEGA) software version 4.0
-
Tamura K., Dudley J., Nei M., and Kumar S. MEGA4: Molecular Evolutionary Genetics Analysis (MEGA) software version 4.0. Mol. Biol. Evol. 24 (2007) 1596-1599
-
(2007)
Mol. Biol. Evol.
, vol.24
, pp. 1596-1599
-
-
Tamura, K.1
Dudley, J.2
Nei, M.3
Kumar, S.4
-
35
-
-
33746524898
-
Family Flaviviridae
-
Fauquet C.M., Mayo M.A., Maniloff J., Desselberger U., and Ball L.A. (Eds), Academic Press, San Diego
-
Thiel H.-J., Collett M.S., Gould E.A., Heinz F.X., Houghton M., Meyers G., Purcell R.H., and Rice C.M. Family Flaviviridae. In: Fauquet C.M., Mayo M.A., Maniloff J., Desselberger U., and Ball L.A. (Eds). Virus Taxonomy: VIIIth Report of the International Committee on Taxonomy of Viruses (2005), Academic Press, San Diego 979-996
-
(2005)
Virus Taxonomy: VIIIth Report of the International Committee on Taxonomy of Viruses
, pp. 979-996
-
-
Thiel, H.-J.1
Collett, M.S.2
Gould, E.A.3
Heinz, F.X.4
Houghton, M.5
Meyers, G.6
Purcell, R.H.7
Rice, C.M.8
-
36
-
-
0027968068
-
CLUSTAL W: improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice
-
Thompson J.D., Higgins D.G., and Gibson T.J. CLUSTAL W: improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice. Nucleic Acids Res. 22 (1994) 4673-4680
-
(1994)
Nucleic Acids Res.
, vol.22
, pp. 4673-4680
-
-
Thompson, J.D.1
Higgins, D.G.2
Gibson, T.J.3
-
37
-
-
0033007475
-
Genetic analysis of pestiviruses at the 3′ end of the genome
-
Vilcek S., Paton D., Lowings P., Björklund H., Nettleton P., and Belák S. Genetic analysis of pestiviruses at the 3′ end of the genome. Virus Genes 18 (1999) 107-114
-
(1999)
Virus Genes
, vol.18
, pp. 107-114
-
-
Vilcek, S.1
Paton, D.2
Lowings, P.3
Björklund, H.4
Nettleton, P.5
Belák, S.6
-
38
-
-
26244459118
-
Synergistic effects of combining morphological and molecular data in resolving the phylogeny of butterflies and skippers
-
Wahlberg N., Braby M.F., Brower A.V., de Jong R., Lee M.M., Nylin S., Pierce N.E., Sperling F.A., Vila R., Warren A.D., and Zakharov E. Synergistic effects of combining morphological and molecular data in resolving the phylogeny of butterflies and skippers. Proc. Biol. Sci. 272 (2005) 1577-1586
-
(2005)
Proc. Biol. Sci.
, vol.272
, pp. 1577-1586
-
-
Wahlberg, N.1
Braby, M.F.2
Brower, A.V.3
de Jong, R.4
Lee, M.M.5
Nylin, S.6
Pierce, N.E.7
Sperling, F.A.8
Vila, R.9
Warren, A.D.10
Zakharov, E.11
-
39
-
-
35748939384
-
Molecular phylogenetic analysis of bovine viral diarrhoea virus: a Bayesian approach
-
Xia H., Liu L., Wahlberg N., Baule C., and Belák S. Molecular phylogenetic analysis of bovine viral diarrhoea virus: a Bayesian approach. Virus Res. 137 (2007) 53-62
-
(2007)
Virus Res.
, vol.137
, pp. 53-62
-
-
Xia, H.1
Liu, L.2
Wahlberg, N.3
Baule, C.4
Belák, S.5
|