The potato developer (D) locus encodes an R2R3 MYB transcription factor that regulates expression of multiple anthocyanin structural genes in tuber skin

Theoretical and Applied Genetics

Volumn 120, Issue 1, 2009, Pages 45-57

  Jung, Chun Suk ^a   Griffiths, Helen M ^a   De Jong, Darlene M ^a   Cheng, Shuping ^a   Bodis, Mary ^a   Kim, Tae Sung ^a   De Jong, Walter S ^a  

^a Department of Obstetrics Gynecology   (United States)

Author keywords

[No Author keywords available]

Indexed keywords

35S PROMOTER; ANTHOCYANIN PIGMENT; BIOSYNTHETIC GENE; CDNA CLONES; DIHYDROFLAVONOL 4 REDUCTASE; DIPLOID POTATOES; FLAVONOIDS; HYDROXYLASES; MYB TRANSCRIPTION FACTORS; PIGMENTED SKIN; STRUCTURAL GENE; TRANSFORMANTS;

CLONING; GENES; SKIN; TRANSCRIPTION FACTORS;

TRANSCRIPTION;

ANTHOCYANIN; ARABIDOPSIS PROTEIN; BOTRYTIS SUSCEPTIBLE1 PROTEIN, ARABIDOPSIS; TRANSCRIPTION FACTOR; VEGETABLE PROTEIN;

AMINO ACID SEQUENCE; ARTICLE; BIOSYNTHESIS; CHEMISTRY; CROSS BREEDING; GENE EXPRESSION REGULATION; GENETICS; GENOTYPE; HISTOLOGY; METABOLISM; MOLECULAR GENETICS; PETUNIA; PIGMENTATION; PLANT TUBER; POTATO; SEQUENCE ALIGNMENT; TRANSGENIC PLANT;

AMINO ACID SEQUENCE; ANTHOCYANINS; ARABIDOPSIS PROTEINS; CROSSES, GENETIC; GENE EXPRESSION REGULATION, PLANT; GENOTYPE; MOLECULAR SEQUENCE DATA; PETUNIA; PIGMENTATION; PLANT PROTEINS; PLANT TUBERS; PLANTS, GENETICALLY MODIFIED; SEQUENCE ALIGNMENT; SOLANUM TUBEROSUM; TRANSCRIPTION FACTORS;

PETUNIA; PHYLLANTHUS ANGUSTIFOLIUS; SOLANUM TUBEROSUM;

EID: 70949102291     PISSN: 00405752     EISSN: None     Source Type: Journal    
DOI: 10.1007/s00122-009-1158-3     Document Type: Article

References (53)

1. JO Borevitz Y Xia J Blount RA Dixon C Lamb 2000 Activation tagging identifies a conserved MYB regulator of phenylpropanoid biosynthesis Plant Cell 12 2383 2393 10.1105/tpc.12.12.2383 1:CAS:528:DC%2BD3MXns1ShtQ%3D%3D 11148285 (Pubitemid 32106413)
2. Y Borovsky M Oren-Shamir R Ovadia W De Jong I Paran 2004 The A locus that controls anthocyanin accumulation in pepper encodes a MYB transcription factor homologous to Anthocyanin2 of Petunia Theor Appl Genet 109 23 29 10.1007/s00122-004-1625-9 1:CAS:528:DC%2BD2cXkslKnsr0%3D 14997303 (Pubitemid 38908546)
3. KC Cone FA Burr B Burr 1986 Molecular analysis of the maize anthocyanin regulatory locus C1 Proc Natl Acad Sci USA 83 9631 9635 10.1073/pnas.83.24.9631 1:CAS:528:DyaL2sXnvFGrtw%3D%3D 3025847
4. G Consonni A Ronchi R Pilu G Gavazzi SL Dellaporta C Tonelli 1997 Ectopic anthocyanin pigmentation in maize as a tool for defining interactions between homologous regulatory factors Mol Gen Genet 256 265 276 10.1007/s004380050569 1:CAS:528:DyaK2sXnsFyjs7w%3D 9393451 (Pubitemid 27487748)
5. M-C Cutanda-Perez A Ageorges C Gomez S Vialet N Terrier C Romieu L Torregrosa 2009 Ectopic expression of VlmybA1 in grapevine activates a narrow set of genes involved in anthocyanin synthesis and transport Plaant Mol Biol 69 633 648 10.1007/s11103-008-9446-x 1:CAS:528:DC%2BD1MXis1artLk%3D
6. H De Jong 1987 Inheritance of pigmented tuber flesh in cultivated diploid potatoes Am Pot J 64 337 343 10.1007/BF02853595
7. H De Jong 1991 Inheritance of anthocyanin pigmentation in the cultivated potato: a critical review Am Pot J 68 585 593 10.1007/BF02853712
8. H De Jong VJ Burns 1993 Inheritance of tuber shape in cultivated diploid potatoes Am Pot J 70 267 283 10.1007/BF02849314
9. H De Jong PR Rowe 1972 Genetic markers in inbred clones of cultivated diploid potatoes Potato Res 15 200 208 10.1007/BF02361807
10. WS De Jong DM De Jong H De Jong J Kalazich M Bodis 2003 An allele of dihydroflavonol 4-reductase associated with the ability to produce red anthocyanin pigments in potato (Solanum tuberosum L.) Theor Appl Genet 107 1375 1383 10.1007/s00122-003-1395-9 12955207 (Pubitemid 37496541)
11. WS De Jong DM De Jong M Bodis 2003 A fluorogenic 5′ nuclease (TaqMan) assay to assess dosage of a marker tightly linked to red skin color in autotetraploid potato Theor Appl Genet 107 1384 1390 10.1007/s00122-003-1420-z 13679981 (Pubitemid 37496542)
12. WS De Jong NY Eannetta DM De Jong M Bodis 2004 Candidate gene analysis of anthocyanin pigmentation loci in the Solanaceae Theor Appl Genet 108 423 432 10.1007/s00122-003-1455-1 14523517 (Pubitemid 38300120)
13. De Vries S, Hoge H, Blisseling T (1988) Isolation of total and polysomal RNA from plant tissues. In: Gelvin SB, Schilperoort RA, Verma DPS (eds) Plant molecular biology manual, vol B6, pp 1-13
14. KS Dodds DH Long 1955 The inheritance of colour in diploid potatoes. I. Types of anthocyanidins and their genetic loci J Genet 53 136 149 10.1007/BF02981517 1:CAS:528:DyaG2MXjtlSjsw%3D%3D
15. KS Dodds DH Long 1956 The inheritance of colour in diploid potatoes. II. Three-factor linkage group J Genet 54 27 41 10.1007/BF02981699
16. RV Espley RP Hellen J Putterill DE Stevenson S Kutty-Amma AC Allan 2007 Red colouration in apple fruit is due to the activity of the MYB transcription factor, MdMYB10 Plant J 49 414 427 10.1111/j.1365-313X.2006.02964.x 1:CAS:528:DC%2BD2sXisVyisb4%3D 17181777 (Pubitemid 46146623)
17. KC Garg SP Tiwari KP Sharma 1981 Inheritance of leaf pigmentation in dihaploid-Phureja hybrids of potato J Ind Pot Assn 8 31 34
18. C Gebhardt E Ritter U Schachtschabel B Walkemeier H Uhrig F Salamini 1989 RFLP analysis and linkage mapping in Solanum tuberosum Theor Appl Genet 78 65 75 10.1007/BF00299755
19. JB Hollick GI Patterson IM Asmundsson VL Chandler 2000 Paramutation alters regulatory control of the maize pl1 locus Genet 154 1827 1838 1:CAS:528:DC%2BD3cXjtVams7g%3D
20. TA Holton EC Cornish 1995 Genetics and biochemistry of anthocyanin biosynthesis Plant Cell 7 1071 1083 10.1105/tpc.7.7.1071 1:CAS:528: DyaK2MXnt1Sgt7g%3D 12242398
21. Howard HW (1970) Genetics of the potato. Logos Press Limited, Great Britain
22. Z Huang HS Mason 2004 Conformational analysis of hepatitis B surface antigen fusions in an Agrobacterium-mediated transient expression system Plant Biotechnol J 2 241 249 10.1111/j.1467-7652.2004.00068.x 1:CAS:528: DC%2BD2cXltFyjsrY%3D 17147615 (Pubitemid 40199456)
23. MSB Judo AB Wedel C Wilson 1998 Stimulation and suppression of PCR-mediated recombination Nucleic Acids Res 26 1819 1825 10.1093/nar/26.7.1819 1:CAS:528:DyaK1cXis1Oju7o%3D 9512558 (Pubitemid 28291822)
24. CS Jung HM Griffiths DM De Jong S Cheng M Bodis WS De Jong 2005 The potato P locus codes for flavonoid 3′,5′-hydroxylase Theor Appl Genet 110 269 275 10.1007/s00122-004-1829-z 1:CAS:528:DC%2BD2MXntF2ktw%3D%3D 15565378 (Pubitemid 40181224)
25. R Kessel PR Rowe 1974 Inheritance of two qualitative traits and a proposed genetic map for their linkage group in diploid potatoes Potato Res 17 283 295 10.1007/BF02360322
26. HD Kranz M Denekamp R Greco H Jin A Leyva RC Meissner K Petroni A Urzainqui M Bevan C Martin S Smeekens C Tonelli J Paz-Ares B Weisshaar 1998 Towards functional characterisation of the members of the R2R3-MYB gene family from Arabidopsis thaliana Plant J 16 263 276 10.1046/j.1365-313x.1998.00278.x 1:CAS:528:DyaK1cXnvFKqsbc%3D 9839469 (Pubitemid 28551921)
27. CE Lewis JRL Walker JE Lancaster KH Sutton 1998 Determination of anthocyanins, flavonoids and phenolic acids in potatoes. I: Coloured cultivars of Solanum tuberosum L J Sci Food Agric 77 45 57 10.1002/(SICI)1097-0010(199805) 77:1<45::AID-JSFA1>3.0.CO;2-S 1:CAS:528:DyaK1cXjt1GmtLk%3D (Pubitemid 28226641)
28. AP Lunden 1937 Arvelighetsunderskelser i potet (Inheritance studies in the potato) Meld Norg Landbr 17 1 156
29. AP Lunden 1960 Some more evidence of autotetraploid inheritance in the potato (Solanum tuberosum) Euphytica 9 225 234 10.1007/BF00022227
30. A Lunden 1974 Inheritance of tuber and flower colour in the potato (Solanum tubersosum, L.) Meld Norg Landbr (Scientific Reports of the Agricultural University of Norway) 53 1 8
31. H Mathews SK Clendennen CG Caldwell XL Liu K Connors N Matheis DK Schuster DJ Menasco W Wagoner J Lightner DR Wagner 2003 Activation tagging in tomato identifies a transcriptional regulator of anthocyanin biosynthesis, modification, and transport Plant Cell 15 1689 1703 10.1105/tpc.012963 1:CAS:528:DC%2BD3sXms1WlsL8%3D 12897245 (Pubitemid 37078327)
32. A Meyerhans J Vartanian S Wain-Hobson 1990 DNA recombination during PCR Nucleic Acids Res 18 1687 1691 10.1093/nar/18.7.1687 1:CAS:528: DyaK3cXitFWqtL8%3D 2186361
33. J Mol E Grotewold R Koes 1998 How genes paint flowers and seeds Trends Plant Sci 3 212 217 10.1016/S1360-1385(98)01242-4 (Pubitemid 28271167)
34. K Naito Y Umemura M Mori T Sumida T Okada N Takamatsu Y Okawa K Hayashi N Saito T Honda 1998 Acylated pelargonidin glycosides from a red potato Phytochem 47 109 112 10.1016/S0031-9422(97)00520-7 1:CAS:528:DyaK1cXnvFWm (Pubitemid 28138668)
35. GI Patterson CJ Thorpe VL Chandler 1993 Paramutation, an allelic interaction, is associated with a stable and heritable reduction of transcription of the maize b regulatory gene Genet 135 881 894 1:CAS:528:DyaK2cXisVSgsb4%3D
36. L Qineng Y Qing Z Huawen 2006 Effects of Cerium on accumulation of anthocyanins and expression of anthocyanin biosynthetic genes in potato cell tissue cultures J Rare Earth 24 479 484 10.1016/S1002-0721(06)60147-6 (Pubitemid 44444130)
37. F Quattrocchio JF Wing HTC Leppen JNM Mol R Koes 1993 Regulatory genes controlling anthocyanin pigmentation are functionally conserved among plant species and have distinct sets of target genes Plant Cell 5 1497 1512 10.1105/tpc.5.11.1497 1:CAS:528:DyaK2cXisVSgtrY%3D 12271045 (Pubitemid 2021756)
38. F Quattrocchio JF Wing K van der Woude JNM Mol R Koes 1998 Analysis of bHLH and MYB domain proteins: species-specific regulatory differences are caused by divergent evolution of target anthocyanin genes Plant J 13 475 488 10.1046/j.1365-313X.1998.00046.x 1:CAS:528:DyaK1cXitFyrsrc%3D 9680994 (Pubitemid 28107288)
39. F Quattrocchio J Wing K van der Woude E Souer N de Vetten J Mol R Koes 1999 Molecular analysis of the anthocyanin2 gene of Petunia and its role in the evolution of flower color Plant Cell 11 1433 1444 10.1105/tpc.11.8.1433 1:CAS:528:DyaK1MXmtVWmu70%3D 10449578
40. LE Rodriguez-Saona MM Giusti RE Wrolstad 1998 Anthocyanin pigment composition of red-fleshed potatoes J Food Sci 63 458 465 10.1111/j.1365-2621. 1998.tb15764.x 1:CAS:528:DyaK1cXksVWit70%3D
41. I Romero A Fuertes MJ Benito JM Malpica A Leyva J Paz-Ares 1998 More than 80R2R3-MYB regulatory genes in the genome of Arabidopsis thaliana Plant J 14 273 284 10.1046/j.1365-313X.1998.00113.x 1:CAS:528:DyaK1cXjslOmu70%3D 9628022 (Pubitemid 28235990)
42. CM Rommens CM Richael H Yan DA Navarre J Ye M Krucker K Swords 2008 Engineered native pathways for high kaempferol and caffeoylquinate production in potato Plant Biotech J 6 870 886 10.1111/j.1467-7652.2008.00362.x 1:CAS:528:DC%2BD1MXnsVCqsQ%3D%3D
43. RN Salaman 1910 The inheritance of colour and other characters in the potato J Genet 1 7 46 10.1007/BF02981567
44. R Schwab S Ossowski M Riester N Warthmann D Weigel 2006 Highly specific gene silencing by artificial microRNAs in Arabidopsis Plant J 18 1121 1133 1:CAS:528:DC%2BD28XkslCmurg%3D
45. R Stracke M Werber B Weisshaar 2001 The R2R3-MYB gene family in Arabidopsis thaliana Curr Opin Plant Biol 4 447 456 10.1016/S1369-5266(00)00199- 0 1:CAS:528:DC%2BD3MXmvFKgt74%3D 11597504 (Pubitemid 32792562)
46. S-K Sung S-B Choi J-S Jeon MC Park K-W Lee 1994 Expression patterns of CaMV 35S promoter-GUS in transgenic potatoes and their clonal progenies J Plant Biol 37 17 25 1:CAS:528:DyaK2cXmsFWgsrk%3D
47. G Sunilkumar L Mohr E Lopata-Finch C Emani KS Rathore 2002 Developmental and tissue-specific expression of CaMV promoter in cotton as revealed by GFP Plant Mol Biol 50 463 474 10.1023/A:1019832123444 1:CAS:528:DC%2BD38Xmt12rsbw%3D 12369622
48. HJ Van Eck JME Jacobs J van Dijk WJ Stiekema E Jacobsen 1993 Identification and mapping of three flower colour loci of potato (S. tuberosum) by RFLP analysis Theor Appl Genet 86 295 300 10.1007/BF00222091
49. HJ Van Eck JME Jacobs PMMM Van Den Berg WJ Stiekema E Jacobsen 1994 The inheritance of anthocyanin pigmentation in potato (Solanum tuberosum L.) and mapping of tuber skin colour loci using RFLPs Hered 73 410 421 10.1038/hdy.1994.189 1:CAS:528:DyaK2MXitVWisLs%3D
50. N Warthmann H Chen S Ossowski D Weigel P Herve 2008 Highly specific gene silencing by artificial miRNAs in rice PLoS ONE 3 e1829 10.1371/journal.pone. 0001829 18350165 (Pubitemid 351936288)
51. C Yanhui Y Xiaoyuan H Kun L Meihua L Jigang G Zhaofeng L Zhiqiang Z Yunfei W Xiaoxiao Q Xiaoming S Yunping Z Li D Xiaohui L Jingchu D Xing-Wang C Zhangliang G Hongya Q Li-Jia 2006 The MYB transcription factor superfamily of Arabidopsis: expression analysis and phylogenetic comparison with the rice MYB family Plant Mol Biol 60 107 124 10.1007/s11103-005-2910-y 16463103 (Pubitemid 43194446)
52. Y Zhang CS Jung W De Jong 2009 Genetic analysis of pigmented tuber flesh in potato Theor Appl Genet 119 143 150 10.1007/s00122-009-1024-3 1:CAS:528:DC%2BD1MXmslOkt7o%3D 19363602
53. Y Zhang S Cheng D De Jong H Griffiths R Halitschke W De Jong 2009 The potato R locus codes for dihydroflavonol 4-reductase Theor Appl Genet 119 931 937 10.1007/s00122-009-1100-8 1:CAS:528:DC%2BD1MXhtVaqsbjI 19588118