-
1
-
-
14844332708
-
Pathway information for systems biology
-
10.1016/j.febslet.2005.02.005, 15763557
-
Cary MP, Bader GD, Sander C. Pathway information for systems biology. FEBS Lett 2005, 579(8):1815-1820. 10.1016/j.febslet.2005.02.005, 15763557.
-
(2005)
FEBS Lett
, vol.579
, Issue.8
, pp. 1815-1820
-
-
Cary, M.P.1
Bader, G.D.2
Sander, C.3
-
2
-
-
8444251784
-
The Wnt signaling pathway in development and disease
-
10.1146/annurev.cellbio.20.010403.113126, 15473860
-
Logan CY, Nusse R. The Wnt signaling pathway in development and disease. Annu Rev Cell Dev Biol 2004, 20:781-810. 10.1146/annurev.cellbio.20.010403.113126, 15473860.
-
(2004)
Annu Rev Cell Dev Biol
, vol.20
, pp. 781-810
-
-
Logan, C.Y.1
Nusse, R.2
-
3
-
-
39149115688
-
Bioinformatics applications for pathway analysis of microarray data
-
10.1016/j.copbio.2007.11.005, 18207385
-
Werner T. Bioinformatics applications for pathway analysis of microarray data. Curr Opin Biotechnol 2008, 19(1):50-54. 10.1016/j.copbio.2007.11.005, 18207385.
-
(2008)
Curr Opin Biotechnol
, vol.19
, Issue.1
, pp. 50-54
-
-
Werner, T.1
-
4
-
-
60949097688
-
Pathway analysis reveals functional convergence of gene expression profiles in breast cancer
-
2447843, 18588682, 10.1186/1755-8794-1-28
-
Shen R, Chinnaiyan AM, Ghosh D. Pathway analysis reveals functional convergence of gene expression profiles in breast cancer. BMC Med Genomics 2008, 1:28. 2447843, 18588682, 10.1186/1755-8794-1-28.
-
(2008)
BMC Med Genomics
, vol.1
, pp. 28
-
-
Shen, R.1
Chinnaiyan, A.M.2
Ghosh, D.3
-
5
-
-
0141785350
-
Profiling of estrogen up- and down-regulated gene expression in human breast cancer cells: Insights into gene networks and pathways underlying estrogenic control of proliferation and cell phenotype
-
10.1210/en.2003-0567, 12959972
-
Frasor J, Danes JM, Komm B, Chang KCN, Lyttle CR, Katzenellenbogen BS. Profiling of estrogen up- and down-regulated gene expression in human breast cancer cells: Insights into gene networks and pathways underlying estrogenic control of proliferation and cell phenotype. Endocrinology 2003, 144(10):4562-4574. 10.1210/en.2003-0567, 12959972.
-
(2003)
Endocrinology
, vol.144
, Issue.10
, pp. 4562-4574
-
-
Frasor, J.1
Danes, J.M.2
Komm, B.3
Chang, K.C.N.4
Lyttle, C.R.5
Katzenellenbogen, B.S.6
-
6
-
-
44649115241
-
Functional classification analysis of somatically mutated genes in human breast and colorectal cancers
-
2492759, 18434084, 10.1016/j.ygeno.2008.03.002
-
Chittenden TW, Howe EA, Culhane AC, Sultana R, Taylor JM, Holmes C, Quackenbush J. Functional classification analysis of somatically mutated genes in human breast and colorectal cancers. Genomics 2008, 91(6):508-511. 2492759, 18434084, 10.1016/j.ygeno.2008.03.002.
-
(2008)
Genomics
, vol.91
, Issue.6
, pp. 508-511
-
-
Chittenden, T.W.1
Howe, E.A.2
Culhane, A.C.3
Sultana, R.4
Taylor, J.M.5
Holmes, C.6
Quackenbush, J.7
-
7
-
-
34547807609
-
FGFR1/PI3K/AKT signaling pathway is a novel target for antiangiogenic effects of the cancer drug fumagillin (TNP-470)
-
10.1002/jcb.21265, 17295210
-
Chen GJ, Weylie B, Hu C, Zhu J, Forough R. FGFR1/PI3K/AKT signaling pathway is a novel target for antiangiogenic effects of the cancer drug fumagillin (TNP-470). J Cell Biochem 2007, 101(6):1492-1504. 10.1002/jcb.21265, 17295210.
-
(2007)
J Cell Biochem
, vol.101
, Issue.6
, pp. 1492-1504
-
-
Chen, G.J.1
Weylie, B.2
Hu, C.3
Zhu, J.4
Forough, R.5
-
8
-
-
27844598284
-
The Akt/PKB pathway: molecular target for cancer drug discovery
-
10.1038/sj.onc.1209088, 16288295
-
Cheng JQ, Lindsley CW, Cheng GZ, Yang H, Nicosia SV. The Akt/PKB pathway: molecular target for cancer drug discovery. Oncogene 2005, 24(50):7482-7492. 10.1038/sj.onc.1209088, 16288295.
-
(2005)
Oncogene
, vol.24
, Issue.50
, pp. 7482-7492
-
-
Cheng, J.Q.1
Lindsley, C.W.2
Cheng, G.Z.3
Yang, H.4
Nicosia, S.V.5
-
9
-
-
33749367676
-
The Met pathway: master switch and drug target in cancer progression
-
10.1096/fj.06-5947rev, 16873884
-
Mazzone M, Comoglio PM. The Met pathway: master switch and drug target in cancer progression. FASEB J 2006, 20(10):1611-1621. 10.1096/fj.06-5947rev, 16873884.
-
(2006)
FASEB J
, vol.20
, Issue.10
, pp. 1611-1621
-
-
Mazzone, M.1
Comoglio, P.M.2
-
10
-
-
34548513061
-
The Wnt/beta-catenin signaling pathway as a target in drug discovery
-
10.1254/jphs.CR0070024, 17721040
-
Takahashi-Yanaga F, Sasaguri T. The Wnt/beta-catenin signaling pathway as a target in drug discovery. J Pharmacol Sci 2007, 104(4):293-302. 10.1254/jphs.CR0070024, 17721040.
-
(2007)
J Pharmacol Sci
, vol.104
, Issue.4
, pp. 293-302
-
-
Takahashi-Yanaga, F.1
Sasaguri, T.2
-
11
-
-
0034678033
-
Target-oriented and diversity-oriented organic synthesis in drug discovery
-
10.1126/science.287.5460.1964, 10720315
-
Schreiber SL. Target-oriented and diversity-oriented organic synthesis in drug discovery. Science 2000, 287(5460):1964-1969. 10.1126/science.287.5460.1964, 10720315.
-
(2000)
Science
, vol.287
, Issue.5460
, pp. 1964-1969
-
-
Schreiber, S.L.1
-
12
-
-
58449117420
-
Metabolomics in pharmaceutical research and development: Metabolites, mechanisms and pathways
-
Xu EY, Schaefer WH, Xu QW. Metabolomics in pharmaceutical research and development: Metabolites, mechanisms and pathways. Current Opinion in Drug Discovery & Development 2009, 12(1):40-52.
-
(2009)
Current Opinion in Drug Discovery & Development
, vol.12
, Issue.1
, pp. 40-52
-
-
Xu, E.Y.1
Schaefer, W.H.2
Xu, Q.W.3
-
13
-
-
0042827298
-
Survival-signaling pathway as a promising target for cancer chemotherapy
-
Fujita N, Tsuruo T. Survival-signaling pathway as a promising target for cancer chemotherapy. Cancer chemotherapy and pharmacology 2003, 52(Suppl 1):S24-28.
-
(2003)
Cancer chemotherapy and pharmacology
, vol.52
, Issue.SUPPL 1
-
-
Fujita, N.1
Tsuruo, T.2
-
14
-
-
84866149676
-
Genomic strategies for personalized cancer therapy
-
10.1093/hmg/ddm184, 17911165
-
Garman KS, Nevins JR, Potti A. Genomic strategies for personalized cancer therapy. Hum Mol Genet 2007, 16(Spec No 2):R226-232. 10.1093/hmg/ddm184, 17911165.
-
(2007)
Hum Mol Genet
, vol.16
, Issue.SPEC NO 2
-
-
Garman, K.S.1
Nevins, J.R.2
Potti, A.3
-
15
-
-
0040191763
-
Genomic medicine and the future of health care
-
10.1126/science.287.5460.1977, 10755952
-
Sander C. Genomic medicine and the future of health care. Science 2000, 287(5460):1977-1978. 10.1126/science.287.5460.1977, 10755952.
-
(2000)
Science
, vol.287
, Issue.5460
, pp. 1977-1978
-
-
Sander, C.1
-
16
-
-
28944444807
-
An integrated database SPAD (Signaling PAthway Database) for signal transduction and genetic information
-
Tateishi HS N, Kuhara S, Takagi T, Kanehisa M. An integrated database SPAD (Signaling PAthway Database) for signal transduction and genetic information. Genome Informatics 1995, 6:160-161.
-
(1995)
Genome Informatics
, vol.6
, pp. 160-161
-
-
Tateishi HS, N.1
Kuhara, S.2
Takagi, T.3
Kanehisa, M.4
-
17
-
-
84888302819
-
CST - Cell Signaling Technology Pathway Database
-
CST - Cell Signaling Technology Pathway Database. , http://www.cellsignal.com/
-
-
-
-
18
-
-
84888290168
-
STKE - Signal Transduction Knowledge Environment
-
STKE - Signal Transduction Knowledge Environment. , http://www.stke.org/
-
-
-
-
19
-
-
84888286205
-
COPE - Cytokines and Cells Online Pathfinder Encyclopedia
-
COPE - Cytokines and Cells Online Pathfinder Encyclopedia. , http://www.copewithcytokines.de/
-
-
-
-
20
-
-
0033976586
-
TRANSFAC: an integrated system for gene expression regulation
-
102445, 10592259, 10.1093/nar/28.1.316
-
Wingender E, Chen X, Hehl R, Karas H, Liebich I, Matys V, Meinhardt T, Pruss M, Reuter I, Schacherer F. TRANSFAC: an integrated system for gene expression regulation. Nucleic Acids Research 2000, 28(1):316-319. 102445, 10592259, 10.1093/nar/28.1.316.
-
(2000)
Nucleic Acids Research
, vol.28
, Issue.1
, pp. 316-319
-
-
Wingender, E.1
Chen, X.2
Hehl, R.3
Karas, H.4
Liebich, I.5
Matys, V.6
Meinhardt, T.7
Pruss, M.8
Reuter, I.9
Schacherer, F.10
-
21
-
-
0033982936
-
KEGG: Kyoto Encyclopedia of Genes and Genomes
-
102409, 10592173, 10.1093/nar/28.1.27
-
Kanehisa M, Goto S. KEGG: Kyoto Encyclopedia of Genes and Genomes. Nucleic Acids Research 2000, 28(1):27-30. 102409, 10592173, 10.1093/nar/28.1.27.
-
(2000)
Nucleic Acids Research
, vol.28
, Issue.1
, pp. 27-30
-
-
Kanehisa, M.1
Goto, S.2
-
22
-
-
0033977576
-
WIT: integrated system for high-throughput genome sequence analysis and metabolic reconstruction
-
102471, 10592199, 10.1093/nar/28.1.123
-
Overbeek R, Larsen N, Pusch GD, D'Souza M, Selkov E, Kyrpides N, Fonstein M, Maltsev N, Selkov E. WIT: integrated system for high-throughput genome sequence analysis and metabolic reconstruction. Nucleic Acids Res 2000, 28(1):123-125. 102471, 10592199, 10.1093/nar/28.1.123.
-
(2000)
Nucleic Acids Res
, vol.28
, Issue.1
, pp. 123-125
-
-
Overbeek, R.1
Larsen, N.2
Pusch, G.D.3
D'Souza, M.4
Selkov, E.5
Kyrpides, N.6
Fonstein, M.7
Maltsev, N.8
Selkov, E.9
-
23
-
-
84888297371
-
ExPASy - Biochemical Pathways
-
ExPASy - Biochemical Pathways. , http://www.expasy.ch/cgi-bin/search-biochem-index
-
-
-
-
24
-
-
0033957566
-
The University of Minnesota Biocatalysis/Biodegradation Database: microorganisms, genomics and prediction
-
102401, 10592280, 10.1093/nar/28.1.377
-
Ellis LBM, Hershberger CD, Wackett LP. The University of Minnesota Biocatalysis/Biodegradation Database: microorganisms, genomics and prediction. Nucleic Acids Research 2000, 28(1):377-379. 102401, 10592280, 10.1093/nar/28.1.377.
-
(2000)
Nucleic Acids Research
, vol.28
, Issue.1
, pp. 377-379
-
-
Ellis, L.B.M.1
Hershberger, C.D.2
Wackett, L.P.3
-
25
-
-
14844326483
-
Computational prediction of human metabolic pathways from the complete human genome
-
549063, 15642094, 10.1186/gb-2004-6-1-r2
-
Romero P, Wagg J, Green ML, Kaiser D, Krummenacker M, Karp PD. Computational prediction of human metabolic pathways from the complete human genome. Genome Biology 2005, 6(1):R2. 549063, 15642094, 10.1186/gb-2004-6-1-r2.
-
(2005)
Genome Biology
, vol.6
, Issue.1
-
-
Romero, P.1
Wagg, J.2
Green, M.L.3
Kaiser, D.4
Krummenacker, M.5
Karp, P.D.6
-
26
-
-
84888307513
-
Human Protein Reference Database: Building a biological platform for systems biology
-
Peri S, Navarro JD, Amanchy R, Kristiansen T, Jonnalagadda J, Vineeth S, Niranjan V, Muthusamy B, Gandhi TKB, Gronborg M. Human Protein Reference Database: Building a biological platform for systems biology. American Journal of Human Genetics 2003, 73(5):429-429.
-
(2003)
American Journal of Human Genetics
, vol.73
, Issue.5
, pp. 429-429
-
-
Peri, S.1
Navarro, J.D.2
Amanchy, R.3
Kristiansen, T.4
Jonnalagadda, J.5
Vineeth, S.6
Niranjan, V.7
Muthusamy, B.8
Gandhi, T.K.B.9
Gronborg, M.10
-
27
-
-
63549137956
-
HAPPI: an Online Database of Comprehensive Human Annotated and Predicted Protein Interactions
-
2709259, 19594875, 10.1186/1471-2164-10-S1-S16
-
Chen JYS. HAPPI: an Online Database of Comprehensive Human Annotated and Predicted Protein Interactions. BMC Genomics 2009, 10(Suppl 1):S16. 2709259, 19594875, 10.1186/1471-2164-10-S1-S16.
-
(2009)
BMC Genomics
, vol.10
, Issue.SUPPL 1
-
-
Chen, J.Y.S.1
-
28
-
-
13444249988
-
STRING: known and predicted protein-protein associations, integrated and transferred across organisms
-
539959, 15608232
-
von Mering C, Jensen LJ, Snel B, Hooper SD, Krupp M, Foglierini M, Jouffre N, Huynen MA, Bork P. STRING: known and predicted protein-protein associations, integrated and transferred across organisms. Nucleic Acids Res 2005, (33 Database):D433-437. 539959, 15608232.
-
(2005)
Nucleic Acids Res
, vol.Database
, Issue.33
-
-
von Mering, C.1
Jensen, L.J.2
Snel, B.3
Hooper, S.D.4
Krupp, M.5
Foglierini, M.6
Jouffre, N.7
Huynen, M.A.8
Bork, P.9
-
29
-
-
58149186477
-
PID: the Pathway Interaction Database
-
2686461, 18832364, 10.1093/nar/gkn653
-
Schaefer CF, Anthony K, Krupa S, Buchoff J, Day M, Hannay T, Buetow KH. PID: the Pathway Interaction Database. Nucleic Acids Research 2009, 37:D674-D679. 2686461, 18832364, 10.1093/nar/gkn653.
-
(2009)
Nucleic Acids Research
, vol.37
-
-
Schaefer, C.F.1
Anthony, K.2
Krupa, S.3
Buchoff, J.4
Day, M.5
Hannay, T.6
Buetow, K.H.7
-
30
-
-
58149177166
-
Reactome knowledgebase of human biological pathways and processes
-
2686536, 18981052, 10.1093/nar/gkn863
-
Matthews L, Gopinath G, Gillespie M, Caudy M, Croft D, de Bono B, Garapati P, Hemish J, Hermjakob H, Jassal B. Reactome knowledgebase of human biological pathways and processes. Nucleic Acids Research 2009, 37:D619-D622. 2686536, 18981052, 10.1093/nar/gkn863.
-
(2009)
Nucleic Acids Research
, vol.37
-
-
Matthews, L.1
Gopinath, G.2
Gillespie, M.3
Caudy, M.4
Croft, D.5
de Bono, B.6
Garapati, P.7
Hemish, J.8
Hermjakob, H.9
Jassal, B.10
-
31
-
-
84885684657
-
BioCarta
-
BioCarta. , http://www.biocarta.com/index.asp
-
-
-
-
32
-
-
84874658134
-
Pathway Commons
-
Pathway Commons. , http://www.pathwaycommons.org/pc/home.do
-
-
-
-
33
-
-
0141742293
-
PANTHER: a library of protein families and subfamilies indexed by function
-
403709, 12952881, 10.1101/gr.772403
-
Thomas PD, Campbell MJ, Kejariwal A, Mi H, Karlak B, Daverman R, Diemer K, Muruganujan A, Narechania A. PANTHER: a library of protein families and subfamilies indexed by function. Genome Res 2003, 13(9):2129-2141. 403709, 12952881, 10.1101/gr.772403.
-
(2003)
Genome Res
, vol.13
, Issue.9
, pp. 2129-2141
-
-
Thomas, P.D.1
Campbell, M.J.2
Kejariwal, A.3
Mi, H.4
Karlak, B.5
Daverman, R.6
Diemer, K.7
Muruganujan, A.8
Narechania, A.9
-
34
-
-
84888295925
-
Protein Lounge
-
Protein Lounge. , http://www.proteinlounge.com/
-
-
-
-
35
-
-
48349105261
-
WikiPathways: Pathway editing for the people
-
Pico AR, Kelder T, van Iersel MP, Hanspers K, Conklin BR, Evelo C. WikiPathways: Pathway editing for the people. Plos Biology 2008, 6(7):1403-1407.
-
(2008)
Plos Biology
, vol.6
, Issue.7
, pp. 1403-1407
-
-
Pico, A.R.1
Kelder, T.2
van Iersel, M.P.3
Hanspers, K.4
Conklin, B.R.5
Evelo, C.6
-
36
-
-
14844326483
-
Computational prediction of human metabolic pathways from the complete human genome
-
549063, 15642094, 10.1186/gb-2004-6-1-r2
-
Romero P, Wagg J, Green ML, Kaiser D, Krummenacker M, Karp PD. Computational prediction of human metabolic pathways from the complete human genome. Genome Biol 2005, 6(1):R2. 549063, 15642094, 10.1186/gb-2004-6-1-r2.
-
(2005)
Genome Biol
, vol.6
, Issue.1
-
-
Romero, P.1
Wagg, J.2
Green, M.L.3
Kaiser, D.4
Krummenacker, M.5
Karp, P.D.6
-
37
-
-
32044469657
-
Prediction of regulatory pathways using mRNA expression and protein interaction data: application to identification of galactose regulatory pathway
-
10.1016/j.biosystems.2005.06.013, 16384635
-
Darvish A, Najarian K. Prediction of regulatory pathways using mRNA expression and protein interaction data: application to identification of galactose regulatory pathway. Biosystems 2006, 83(2-3):125-135. 10.1016/j.biosystems.2005.06.013, 16384635.
-
(2006)
Biosystems
, vol.83
, Issue.2-3
, pp. 125-135
-
-
Darvish, A.1
Najarian, K.2
-
38
-
-
1842559849
-
Using functional and organizational information to improve genome-wide computational prediction of transcription units on pathway-genome databases
-
10.1093/bioinformatics/btg471, 14751985
-
Romero PR, Karp PD. Using functional and organizational information to improve genome-wide computational prediction of transcription units on pathway-genome databases. Bioinformatics 2004, 20(5):709-717. 10.1093/bioinformatics/btg471, 14751985.
-
(2004)
Bioinformatics
, vol.20
, Issue.5
, pp. 709-717
-
-
Romero, P.R.1
Karp, P.D.2
-
39
-
-
52949089728
-
Predicting pathway membership via domain signatures
-
2553439, 18676972, 10.1093/bioinformatics/btn403
-
Frohlich H, Fellmann M, Sultmann H, Poustka A, Beissbarth T. Predicting pathway membership via domain signatures. Bioinformatics 2008, 24(19):2137-2142. 2553439, 18676972, 10.1093/bioinformatics/btn403.
-
(2008)
Bioinformatics
, vol.24
, Issue.19
, pp. 2137-2142
-
-
Frohlich, H.1
Fellmann, M.2
Sultmann, H.3
Poustka, A.4
Beissbarth, T.5
-
40
-
-
9144248312
-
IntAct: an open source molecular interaction database
-
308786, 14681455, 10.1093/nar/gkh052
-
Hermjakob H, Montecchi-Palazzi L, Lewington C, Mudali S, Kerrien S, Orchard S, Vingron M, Roechert B, Roepstorff P, Valencia A. IntAct: an open source molecular interaction database. Nucleic Acids Research 2004, 32:D452-D455. 308786, 14681455, 10.1093/nar/gkh052.
-
(2004)
Nucleic Acids Research
, vol.32
-
-
Hermjakob, H.1
Montecchi-Palazzi, L.2
Lewington, C.3
Mudali, S.4
Kerrien, S.5
Orchard, S.6
Vingron, M.7
Roechert, B.8
Roepstorff, P.9
Valencia, A.10
-
41
-
-
21544461263
-
PAX of mind for pathway researchers
-
10.1016/S1359-6446(05)03501-4, 15993813
-
Luciano JS. PAX of mind for pathway researchers. Drug Discovery Today 2005, 10(13):937-942. 10.1016/S1359-6446(05)03501-4, 15993813.
-
(2005)
Drug Discovery Today
, vol.10
, Issue.13
, pp. 937-942
-
-
Luciano, J.S.1
-
42
-
-
54249091564
-
Presenting and exploring biological pathways with PathVisio
-
2569944, 18817533, 10.1186/1471-2105-9-399
-
van Iersel MP, Kelder T, Pico AR, Hanspers K, Coort S, Conklin BR, Evelo C. Presenting and exploring biological pathways with PathVisio. Bmc Bioinformatics 2008, 9:399. 2569944, 18817533, 10.1186/1471-2105-9-399.
-
(2008)
Bmc Bioinformatics
, vol.9
, pp. 399
-
-
van Iersel, M.P.1
Kelder, T.2
Pico, A.R.3
Hanspers, K.4
Coort, S.5
Conklin, B.R.6
Evelo, C.7
-
43
-
-
33751435209
-
CPath: open source software for collecting, storing, and querying biological pathways
-
1660554, 17101041, 10.1186/1471-2105-7-497
-
Cerami EG, Bader GD, Gross BE, Sander C. cPath: open source software for collecting, storing, and querying biological pathways. Bmc Bioinformatics 2006, 7:497. 1660554, 17101041, 10.1186/1471-2105-7-497.
-
(2006)
Bmc Bioinformatics
, vol.7
, pp. 497
-
-
Cerami, E.G.1
Bader, G.D.2
Gross, B.E.3
Sander, C.4
-
44
-
-
0347269087
-
MIPS Arabidopsis thaliana Database (MAtDB): an integrated biological knowledge resource for plant genomics
-
308802, 14681437, 10.1093/nar/gkh068
-
Schoof H, Ernst R, Nazarov V, Pfeifer L, Mewes HW, Mayer KF. MIPS Arabidopsis thaliana Database (MAtDB): an integrated biological knowledge resource for plant genomics. Nucleic Acids Res 2004, (32 Database):D373-376. 308802, 14681437, 10.1093/nar/gkh068.
-
(2004)
Nucleic Acids Res
, vol.Database
, Issue.32
-
-
Schoof, H.1
Ernst, R.2
Nazarov, V.3
Pfeifer, L.4
Mewes, H.W.5
Mayer, K.F.6
-
45
-
-
36048966491
-
FlyMine: an integrated database for Drosophila and Anopheles genomics
-
2323218, 17615057, 10.1186/gb-2007-8-7-r129
-
Lyne R, Smith R, Rutherford K, Wakeling M, Varley A, Guillier F, Janssens H, Ji W, McLaren P, North P. FlyMine: an integrated database for Drosophila and Anopheles genomics. Genome Biol 2007, 8(7):R129. 2323218, 17615057, 10.1186/gb-2007-8-7-r129.
-
(2007)
Genome Biol
, vol.8
, Issue.7
-
-
Lyne, R.1
Smith, R.2
Rutherford, K.3
Wakeling, M.4
Varley, A.5
Guillier, F.6
Janssens, H.7
Ji, W.8
McLaren, P.9
North, P.10
-
46
-
-
0037370476
-
The genetics and genomics of cancer
-
10.1038/ng1107, 12610533
-
Balmain A, Gray J, Ponder B. The genetics and genomics of cancer. Nature Genetics 2003, 33(3 s):238-244. 10.1038/ng1107, 12610533.
-
(2003)
Nature Genetics
, vol.33 s
, Issue.3
, pp. 238-244
-
-
Balmain, A.1
Gray, J.2
Ponder, B.3
-
48
-
-
58149330982
-
Meta-analysis of gene expression profiles in breast cancer: toward a unified understanding of breast cancer subtyping and prognosis signatures
-
2575538, 18662380, 10.1186/bcr2124
-
Wirapati P, Sotiriou C, Kunkel S, Farmer P, Pradervand S, Haibe-Kains B, Desmedt C, Ignatiadis M, Sengstag T, Schütz F. Meta-analysis of gene expression profiles in breast cancer: toward a unified understanding of breast cancer subtyping and prognosis signatures. Breast Cancer Research: BCR 2008, 10(4):R65. 2575538, 18662380, 10.1186/bcr2124.
-
(2008)
Breast Cancer Research: BCR
, vol.10
, Issue.4
-
-
Wirapati, P.1
Sotiriou, C.2
Kunkel, S.3
Farmer, P.4
Pradervand, S.5
Haibe-Kains, B.6
Desmedt, C.7
Ignatiadis, M.8
Sengstag, T.9
Schütz, F.10
-
49
-
-
34250006413
-
Genome-wide association study identifies novel breast cancer susceptibility loci
-
2714974, 17529967, 10.1038/nature05887
-
Easton DF, Pooley KA, Dunning AM, Pharoah PD, Thompson D, Ballinger DG, Struewing JP, Morrison J, Field H, Luben R. Genome-wide association study identifies novel breast cancer susceptibility loci. Nature 2007, 447(7148):1087-1095. 2714974, 17529967, 10.1038/nature05887.
-
(2007)
Nature
, vol.447
, Issue.7148
, pp. 1087-1095
-
-
Easton, D.F.1
Pooley, K.A.2
Dunning, A.M.3
Pharoah, P.D.4
Thompson, D.5
Ballinger, D.G.6
Struewing, J.P.7
Morrison, J.8
Field, H.9
Luben, R.10
-
50
-
-
41949142377
-
Genome-wide association study provides evidence for a breast cancer risk locus at 6q22. 33
-
10.1073/pnas.0800441105, 18326623, 2393811
-
Gold B, Kirchhoff T, Stefanov S, Lautenberger J, Viale A, Garber J, Friedman E, Narod S, Olshen AB, Gregersen P. Genome-wide association study provides evidence for a breast cancer risk locus at 6q22. 33. Proc Natl Acad Sci U S A 2008, 105(11):4340-4345. 10.1073/pnas.0800441105, 18326623, 2393811.
-
(2008)
Proc Natl Acad Sci U S A
, vol.105
, Issue.11
, pp. 4340-4345
-
-
Gold, B.1
Kirchhoff, T.2
Stefanov, S.3
Lautenberger, J.4
Viale, A.5
Garber, J.6
Friedman, E.7
Narod, S.8
Olshen, A.B.9
Gregersen, P.10
-
51
-
-
49649091381
-
ProteoLens: a visual analytic tool for multi-scale database-driven biological network data mining
-
2537576, 18793469, 10.1186/1471-2105-9-S9-S5
-
Huan T, Sivachenko A, Harrison S, Chen JY. ProteoLens: a visual analytic tool for multi-scale database-driven biological network data mining. BMC bioinformatics 2008, 9(Suppl 9):S5. 2537576, 18793469, 10.1186/1471-2105-9-S9-S5.
-
(2008)
BMC bioinformatics
, vol.9
, Issue.SUPPL 9
-
-
Huan, T.1
Sivachenko, A.2
Harrison, S.3
Chen, J.Y.4
-
52
-
-
0036704240
-
Foxa (HNF3) up-regulates vitronectin expression during retinoic acid-induced differentiation in mouse neuroblastoma Neuro2a cells
-
10.1247/csf.27.181, 12441652
-
Shimizu S, Kondo M, Miyamoto Y, Hayashi M. Foxa (HNF3) up-regulates vitronectin expression during retinoic acid-induced differentiation in mouse neuroblastoma Neuro2a cells. Cell Struct Funct 2002, 27(4):181-188. 10.1247/csf.27.181, 12441652.
-
(2002)
Cell Struct Funct
, vol.27
, Issue.4
, pp. 181-188
-
-
Shimizu, S.1
Kondo, M.2
Miyamoto, Y.3
Hayashi, M.4
-
53
-
-
33644747188
-
BRCA1 and FOXA1 proteins coregulate the expression of the cell cycle-dependent kinase inhibitor p27(Kip1)
-
10.1038/sj.onc.1209170, 16331276
-
Williamson EA, Wolf I, O'Kelly J, Bose S, Tanosaki S, Koeffler HP. BRCA1 and FOXA1 proteins coregulate the expression of the cell cycle-dependent kinase inhibitor p27(Kip1). Oncogene 2006, 25(9):1391-1399. 10.1038/sj.onc.1209170, 16331276.
-
(2006)
Oncogene
, vol.25
, Issue.9
, pp. 1391-1399
-
-
Williamson, E.A.1
Wolf, I.2
O'Kelly, J.3
Bose, S.4
Tanosaki, S.5
Koeffler, H.P.6
-
54
-
-
3042640898
-
Role of cytochrome P450-dependent arachidonic acid metabolites in liver physiology and pathophysiology
-
10.1016/S1098-8823(03)00077-7, 14626496
-
Sacerdoti D, Gatta A, McGiff JC. Role of cytochrome P450-dependent arachidonic acid metabolites in liver physiology and pathophysiology. Prostaglandins & Other Lipid Mediators 2003, 72(1-2):51-71. 10.1016/S1098-8823(03)00077-7, 14626496.
-
(2003)
Prostaglandins & Other Lipid Mediators
, vol.72
, Issue.1-2
, pp. 51-71
-
-
Sacerdoti, D.1
Gatta, A.2
McGiff, J.C.3
-
55
-
-
0242720683
-
Epoxyeicosatrienoic acids (EETs): metabolism and biochemical function
-
10.1016/S0163-7827(03)00049-3, 14636671
-
Spector AA, Fang X, Snyder GD, Weintraub NL. Epoxyeicosatrienoic acids (EETs): metabolism and biochemical function. Progress in Lipid Research 2004, 43(1):55-90. 10.1016/S0163-7827(03)00049-3, 14636671.
-
(2004)
Progress in Lipid Research
, vol.43
, Issue.1
, pp. 55-90
-
-
Spector, A.A.1
Fang, X.2
Snyder, G.D.3
Weintraub, N.L.4
-
56
-
-
29244437180
-
BRCA1 regulates RAD51 function in response to DNA damage and suppresses spontaneous sister chromatid replication slippage: Implications for sister chromatid cohesion, genome stability, and carcinogenesis
-
10.1158/0008-5472.CAN-05-2156, 16357146
-
Cousineau I, Abaji C, Belmaaza A. BRCA1 regulates RAD51 function in response to DNA damage and suppresses spontaneous sister chromatid replication slippage: Implications for sister chromatid cohesion, genome stability, and carcinogenesis. Cancer Research 2005, 65(24):11384-11391. 10.1158/0008-5472.CAN-05-2156, 16357146.
-
(2005)
Cancer Research
, vol.65
, Issue.24
, pp. 11384-11391
-
-
Cousineau, I.1
Abaji, C.2
Belmaaza, A.3
-
57
-
-
0037468267
-
BRCA2-dependent and independent formation of RAD51 nuclear foci
-
10.1038/sj.onc.1206263, 12606939
-
Tarsounas M, Davies D, West SC. BRCA2-dependent and independent formation of RAD51 nuclear foci. Oncogene 2003, 22(8):1115-1123. 10.1038/sj.onc.1206263, 12606939.
-
(2003)
Oncogene
, vol.22
, Issue.8
, pp. 1115-1123
-
-
Tarsounas, M.1
Davies, D.2
West, S.C.3
-
58
-
-
0037598679
-
The role of phosphatidylinositol 3'-kinase and its downstream signals in erbB-2-mediated transformation
-
Ignatoski KMW, Livant DL, Markwart S, Grewal NK, Ethier SP. The role of phosphatidylinositol 3'-kinase and its downstream signals in erbB-2-mediated transformation. Molecular Cancer Research 2003, 1(7):551-560.
-
(2003)
Molecular Cancer Research
, vol.1
, Issue.7
, pp. 551-560
-
-
Ignatoski, K.M.W.1
Livant, D.L.2
Markwart, S.3
Grewal, N.K.4
Ethier, S.P.5
-
59
-
-
18644376449
-
PKB/Akt phosphorylates p27, impairs nuclear import of p27 and opposes p27-mediated G1 arrest
-
10.1038/nm761, 12244302
-
Liang J, Zubovitz J, Petrocelli T, Kotchetkov R, Connor MK, Han K, Lee JH, Ciarallo S, Catzavelos C, Beniston R. PKB/Akt phosphorylates p27, impairs nuclear import of p27 and opposes p27-mediated G1 arrest. Nature Medicine 2002, 8(10):1153-1160. 10.1038/nm761, 12244302.
-
(2002)
Nature Medicine
, vol.8
, Issue.10
, pp. 1153-1160
-
-
Liang, J.1
Zubovitz, J.2
Petrocelli, T.3
Kotchetkov, R.4
Connor, M.K.5
Han, K.6
Lee, J.H.7
Ciarallo, S.8
Catzavelos, C.9
Beniston, R.10
-
60
-
-
0028630696
-
9-Cis Retinoic Acid Inhibits Growth of Breast-Cancer Cells and down-Regulates Estrogen-Receptor Rna and Protein
-
Rubin M, Fenig E, Rosenauer A, Menendezbotet C, Achkar C, Bentel JM, Yahalom J, Mendelsohn J, Miller WH. 9-Cis Retinoic Acid Inhibits Growth of Breast-Cancer Cells and down-Regulates Estrogen-Receptor Rna and Protein. Cancer Research 1994, 54(24):6549-6556.
-
(1994)
Cancer Research
, vol.54
, Issue.24
, pp. 6549-6556
-
-
Rubin, M.1
Fenig, E.2
Rosenauer, A.3
Menendezbotet, C.4
Achkar, C.5
Bentel, J.M.6
Yahalom, J.7
Mendelsohn, J.8
Miller, W.H.9
-
61
-
-
33947630304
-
FOXA1 as a therapeutic target for breast cancer
-
10.1517/14728222.11.4.507, 17373880
-
Nakshatri H, Badve S. FOXA1 as a therapeutic target for breast cancer. Expert Opinion on Therapeutic Targets 2007, 11(4):507-514. 10.1517/14728222.11.4.507, 17373880.
-
(2007)
Expert Opinion on Therapeutic Targets
, vol.11
, Issue.4
, pp. 507-514
-
-
Nakshatri, H.1
Badve, S.2
-
62
-
-
58149231352
-
Exploring the role of BRCA1, BRCA2 and RAD51 as biomarkers for breast cancer
-
10.1016/j.radonc.2008.02.020, 18343512
-
Ziogas D, Liakakos T, Lykoudis E, Fatourou E, Roukos DH. Exploring the role of BRCA1, BRCA2 and RAD51 as biomarkers for breast cancer. Radiother Oncol 2009, 90(1):161-162. 10.1016/j.radonc.2008.02.020, 18343512.
-
(2009)
Radiother Oncol
, vol.90
, Issue.1
, pp. 161-162
-
-
Ziogas, D.1
Liakakos, T.2
Lykoudis, E.3
Fatourou, E.4
Roukos, D.H.5
-
63
-
-
12144289092
-
A polymorphism in the CDKN1B gene is associated with increased risk of hereditary prostate cancer
-
10.1158/0008-5472.CAN-03-2340, 15026335
-
Chang BL, Zheng SL, Isaacs SD, Wiley KE, Turner A, Li G, Walsh PC, Meyers DA, Isaacs WB, Xu J. A polymorphism in the CDKN1B gene is associated with increased risk of hereditary prostate cancer. Cancer Res 2004, 64(6):1997-1999. 10.1158/0008-5472.CAN-03-2340, 15026335.
-
(2004)
Cancer Res
, vol.64
, Issue.6
, pp. 1997-1999
-
-
Chang, B.L.1
Zheng, S.L.2
Isaacs, S.D.3
Wiley, K.E.4
Turner, A.5
Li, G.6
Walsh, P.C.7
Meyers, D.A.8
Isaacs, W.B.9
Xu, J.10
-
64
-
-
33845347545
-
Soluble epoxide hydrolase inhibition reveals novel biological functions of epoxyeicosatrienoic acids (EETs)
-
1904338, 17164131, 10.1016/j.prostaglandins.2006.05.004
-
Inceoglu B, Schmelzer KR, Morisseau C, Jinks SL, Hammock BD. Soluble epoxide hydrolase inhibition reveals novel biological functions of epoxyeicosatrienoic acids (EETs). Prostaglandins & Other Lipid Mediators 2007, 82(1-4):42-49. 1904338, 17164131, 10.1016/j.prostaglandins.2006.05.004.
-
(2007)
Prostaglandins & Other Lipid Mediators
, vol.82
, Issue.1-4
, pp. 42-49
-
-
Inceoglu, B.1
Schmelzer, K.R.2
Morisseau, C.3
Jinks, S.L.4
Hammock, B.D.5
-
65
-
-
0034704156
-
Targeted disruption of soluble epoxide hydrolase reveals a role in blood pressure regulation
-
10.1074/jbc.M008106200, 11001943
-
Sinal CJ, Miyata M, Tohkin M, Nagata K, Bend JR, Gonzalez FJ. Targeted disruption of soluble epoxide hydrolase reveals a role in blood pressure regulation. Journal of Biological Chemistry 2000, 275(51):40504-40510. 10.1074/jbc.M008106200, 11001943.
-
(2000)
Journal of Biological Chemistry
, vol.275
, Issue.51
, pp. 40504-40510
-
-
Sinal, C.J.1
Miyata, M.2
Tohkin, M.3
Nagata, K.4
Bend, J.R.5
Gonzalez, F.J.6
-
66
-
-
0034711488
-
Soluble epoxide hydrolase regulates hydrolysis of vasoactive epoxyeicosatrienoic acids
-
Yu ZG, Xu FY, Huse LM, Morisseau C, Draper AJ, Newman JW, Parker C, Graham L, Engler MM, Hammock BD. Soluble epoxide hydrolase regulates hydrolysis of vasoactive epoxyeicosatrienoic acids. Circulation Research 2000, 87(11):992-998.
-
(2000)
Circulation Research
, vol.87
, Issue.11
, pp. 992-998
-
-
Yu, Z.G.1
Xu, F.Y.2
Huse, L.M.3
Morisseau, C.4
Draper, A.J.5
Newman, J.W.6
Parker, C.7
Graham, L.8
Engler, M.M.9
Hammock, B.D.10
-
67
-
-
33645103857
-
CHILD syndrome in 3 generations - The importance of mild or minimal skin lesions
-
10.1001/archderm.142.3.348, 16549711
-
Bittar M, Happle R, Grzeschik KH, Leveleki L, Hertl M, Bornholdt D, Konig A. CHILD syndrome in 3 generations - The importance of mild or minimal skin lesions. Archives of Dermatology 2006, 142(3):348-351. 10.1001/archderm.142.3.348, 16549711.
-
(2006)
Archives of Dermatology
, vol.142
, Issue.3
, pp. 348-351
-
-
Bittar, M.1
Happle, R.2
Grzeschik, K.H.3
Leveleki, L.4
Hertl, M.5
Bornholdt, D.6
Konig, A.7
-
68
-
-
84888302059
-
NetPath - Signal Transduction Pathways
-
NetPath - Signal Transduction Pathways. , http://www.netpath.org/
-
-
-
-
69
-
-
33644873213
-
The Universal Protein Resource (UniProt): an expanding universe of protein information
-
1347523, 16381842, 10.1093/nar/gkj161
-
Wu CH, Apweiler R, Bairoch A, Natale DA, Barker WC, Boeckmann B, Ferro S, Gasteiger E, Huang H, Lopez R. The Universal Protein Resource (UniProt): an expanding universe of protein information. Nucleic Acids Res 2006, (34 Database):D187-191. 1347523, 16381842, 10.1093/nar/gkj161.
-
(2006)
Nucleic Acids Res
, vol.Database
, Issue.34
-
-
Wu, C.H.1
Apweiler, R.2
Bairoch, A.3
Natale, D.A.4
Barker, W.C.5
Boeckmann, B.6
Ferro, S.7
Gasteiger, E.8
Huang, H.9
Lopez, R.10
-
70
-
-
84872931106
-
Characterizing Mergeability of Human Molecular Pathways
-
Wu X, Chowbina SR, Li PM, Pandey R, Kasamsetty HN, Chen JY. Characterizing Mergeability of Human Molecular Pathways.
-
-
-
Wu, X.1
Chowbina, S.R.2
Li, P.M.3
Pandey, R.4
Kasamsetty, H.N.5
Chen, J.Y.6
|