-
1
-
-
10744224197
-
Development of human protein reference database as an initial platform for approaching systems biology in humans
-
403728 14525934
-
Peri S Navarro JD Amanchy R Kristiansen TZ Jonnalagadda CK Surendranath V Niranjan V Muthusamy B Gandhi TK Gronborg M Development of human protein reference database as an initial platform for approaching systems biology in humans Genome research 2003, 13(10):2363-2371. 403728 14525934
-
(2003)
Genome Research
, vol.13
, Issue.10
, pp. 2363-2371
-
-
Peri, S.1
Navarro, J.D.2
Amanchy, R.3
Kristiansen, T.Z.4
Jonnalagadda, C.K.5
Surendranath, V.6
Niranjan, V.7
Muthusamy, B.8
Gandhi, T.K.9
Gronborg, M.10
-
2
-
-
0036088133
-
DIP, the Database of Interacting Proteins: A research tool for studying cellular networks of protein interactions
-
99070 11752321
-
Xenarios I Salwinski L Duan XJ Higney P Kim SM Eisenberg D DIP, the Database of Interacting Proteins: A research tool for studying cellular networks of protein interactions Nucleic Acids Res 2002, 30(1):303-305. 99070 11752321
-
(2002)
Nucleic Acids Res
, vol.30
, Issue.1
, pp. 303-305
-
-
Xenarios, I.1
Salwinski, L.2
Duan, X.J.3
Higney, P.4
Kim, S.M.5
Eisenberg, D.6
-
3
-
-
0037245913
-
BIND: The Biomolecular Interaction Network Database
-
165503 12519993
-
Bader GD Betel D Hogue CW BIND: The Biomolecular Interaction Network Database Nucleic Acids Res 2003, 31(1):248-250. 165503 12519993
-
(2003)
Nucleic Acids Res
, vol.31
, Issue.1
, pp. 248-250
-
-
Bader, G.D.1
Betel, D.2
Hogue, C.W.3
-
4
-
-
0036799752
-
Inferring domain-domain interactions from protein-protein interactions
-
187530 12368246
-
Deng M Mehta S Sun F Chen T Inferring domain-domain interactions from protein-protein interactions Genome Res 2002, 12(10):1540-1548. 187530 12368246
-
(2002)
Genome Res
, vol.12
, Issue.10
, pp. 1540-1548
-
-
Deng, M.1
Mehta, S.2
Sun, F.3
Chen, T.4
-
5
-
-
20744456475
-
Correlation between gene expression profiles and protein-protein interactions within and across genomes
-
15797912
-
Bhardwaj N Lu H Correlation between gene expression profiles and protein-protein interactions within and across genomes Bioinformatics 2005, 21(11):2730-2738. 15797912
-
(2005)
Bioinformatics
, vol.21
, Issue.11
, pp. 2730-2738
-
-
Bhardwaj, N.1
Lu, H.2
-
6
-
-
0035002541
-
Mining literature for protein-protein interactions
-
11301305
-
Marcotte EM Xenarios I Eisenberg D Mining literature for protein-protein interactions Bioinformatics 2001, 17(4):359-363. 11301305
-
(2001)
Bioinformatics
, vol.17
, Issue.4
, pp. 359-363
-
-
Marcotte, E.M.1
Xenarios, I.2
Eisenberg, D.3
-
7
-
-
18744376914
-
Online predicted human interaction database
-
15657099
-
Brown KR Jurisica I Online predicted human interaction database Bioinformatics 2005, 21(9):2076-2082. 15657099
-
(2005)
Bioinformatics
, vol.21
, Issue.9
, pp. 2076-2082
-
-
Brown, K.R.1
Jurisica, I.2
-
8
-
-
33845220382
-
IntNetDB v1.0: An integrated protein-protein interaction network database generated by a probabilistic model
-
1661597 17112386
-
Xia K Dong D Han JD IntNetDB v1.0: An integrated protein-protein interaction network database generated by a probabilistic model BMC Bioinformatics 2006, 7:508. 1661597 17112386
-
(2006)
BMC Bioinformatics
, vol.7
, pp. 508
-
-
Xia, K.1
Dong, D.2
Han, J.D.3
-
10
-
-
84886754216
-
-
HAPP http://bio.informatics.iupui.edu/HAPPI/
-
HAPP
-
-
-
11
-
-
13444249988
-
STRING: Known and predicted protein-protein associations, integrated and transferred across organisms
-
Database). 539959 15608232
-
von Mering C Jensen LJ Snel B Hooper SD Krupp M Foglierini M Jouffre N Huynen MA Bork P STRING: Known and predicted protein-protein associations, integrated and transferred across organisms Nucleic Acids Res 2005, 33(Database):D433-437. 539959 15608232
-
(2005)
Nucleic Acids Res
-
-
von Mering, C.1
Jensen, L.J.2
Snel, B.3
Hooper, S.D.4
Krupp, M.5
Foglierini, M.6
Jouffre, N.7
Huynen, M.A.8
Bork, P.9
-
12
-
-
0038699587
-
Global protein function prediction from protein-protein interaction networks
-
12740586
-
Vazquez A Flammini A Maritan A Vespignani A Global protein function prediction from protein-protein interaction networks Nat Biotechnol 2003, 21(6):697-700. 12740586
-
(2003)
Nat Biotechnol
, vol.21
, Issue.6
, pp. 697-700
-
-
Vazquez, A.1
Flammini, A.2
Maritan, A.3
Vespignani, A.4
-
13
-
-
0036421126
-
Protein modules and protein-protein interaction
-
12461819
-
Janin J Wodak SJ Protein modules and protein-protein interaction. Introduction Adv Protein Chem 2002, 61:1-8. 12461819
-
(2002)
Introduction Adv Protein Chem
, vol.61
, pp. 1-8
-
-
Janin, J.1
Wodak, S.J.2
-
14
-
-
20644451616
-
Data Mining in Protein Interactomics: Six Computational Research Challenges and Opportunities
-
Chen JY Sivachenko A Data Mining in Protein Interactomics: Six Computational Research Challenges and Opportunities IEEE Magazine in Biology and Medicine 2005, 24(3):95-102.
-
(2005)
IEEE Magazine in Biology and Medicine
, vol.24
, Issue.3
, pp. 95-102
-
-
Chen, J.Y.1
Sivachenko, A.2
-
15
-
-
36849004088
-
PathFinder: Mining signal transduction pathway segments from protein-protein interaction networks
-
2100073 17854489
-
Bebek G Yang J PathFinder: Mining signal transduction pathway segments from protein-protein interaction networks BMC Bioinformatics 2007, 8:335. 2100073 17854489
-
(2007)
BMC Bioinformatics
, vol.8
, pp. 335
-
-
Bebek, G.1
Yang, J.2
-
17
-
-
35349024501
-
Network modeling links breast cancer susceptibility and centrosome dysfunction
-
17922014
-
Pujana MA Han JD Starita LM Stevens KN Tewari M Ahn JS Rennert G Moreno V Kirchhoff T Gold B et al: Network modeling links breast cancer susceptibility and centrosome dysfunction Nat Genet 2007. 17922014
-
(2007)
Nat Genet
-
-
Pujana, M.A.1
Han, J.D.2
Starita, L.M.3
Stevens, K.N.4
Tewari, M.5
Ahn, J.S.6
Rennert, G.7
Moreno, V.8
Kirchhoff, T.9
Gold, B.10
-
18
-
-
0242490780
-
Cytoscape: A software environment for integrated models of biomolecular interaction networks
-
403769 14597658
-
Shannon P Markiel A Ozier O Baliga NS Wang JT Ramage D Amin N Schwikowski B Ideker T Cytoscape: A software environment for integrated models of biomolecular interaction networks Genome research 2003, 13(11):2498-2504. 403769 14597658
-
(2003)
Genome Research
, vol.13
, Issue.11
, pp. 2498-2504
-
-
Shannon, P.1
Markiel, A.2
Ozier, O.3
Baliga, N.S.4
Wang, J.T.5
Ramage, D.6
Amin, N.7
Schwikowski, B.8
Ideker, T.9
-
19
-
-
23144466889
-
VisANT: Data-integrating visual framework for biological networks and modules
-
(Web Server). 1160192 15980487
-
Hu Z Mellor J Wu J Yamada T Holloway D Delisi C VisANT: Data-integrating visual framework for biological networks and modules Nucleic acids research 2005, 33(Web Server):W352-357. 1160192 15980487
-
(2005)
Nucleic Acids Research
-
-
Hu, Z.1
Mellor, J.2
Wu, J.3
Yamada, T.4
Holloway, D.5
Delisi, C.6
-
20
-
-
3242891071
-
WebInterViewer: Visualizing and analyzing molecular interaction networks
-
(Web Server) 441600 15215357
-
Han K Ju BH Jung H WebInterViewer: Visualizing and analyzing molecular interaction networks Nucleic acids research 2004, 32(Web Server):W89-95. 441600 15215357
-
(2004)
Nucleic Acids Research
-
-
Han, K.1
Ju, B.H.2
Jung, H.3
-
21
-
-
33747832812
-
BiologicalNetworks: Visualization and analysis tool for systems biology
-
(Web Server) 1538788 16845051
-
Baitaluk M Sedova M Ray A Gupta A BiologicalNetworks: Visualization and analysis tool for systems biology Nucleic acids research 2006, 34(Web Server):W466-471. 1538788 16845051
-
(2006)
Nucleic Acids Research
-
-
Baitaluk, M.1
Sedova, M.2
Ray, A.3
Gupta, A.4
-
22
-
-
0242559054
-
Pathway studio - The analysis and navigation of molecular networks
-
14594725
-
Nikitin A Egorov S Daraselia N Mazo I Pathway studio - the analysis and navigation of molecular networks Bioinformatics (Oxford, England) 2003, 19(16):2155-2157. 14594725
-
(2003)
Bioinformatics (Oxford, England)
, vol.19
, Issue.16
, pp. 2155-2157
-
-
Nikitin, A.1
Egorov, S.2
Daraselia, N.3
Mazo, I.4
-
23
-
-
34547140875
-
The human disease network
-
1885563 17502601
-
Goh KI Cusick ME Valle D Childs B Vidal M Barabasi AL The human disease network Proceedings of the National Academy of Sciences of the United States of America 2007, 104(21):8685-8690. 1885563 17502601
-
(2007)
Proceedings of the National Academy of Sciences of the United States of America
, vol.104
, Issue.21
, pp. 8685-8690
-
-
Goh, K.I.1
Cusick, M.E.2
Valle, D.3
Childs, B.4
Vidal, M.5
Barabasi, A.L.6
-
25
-
-
38549151817
-
DrugBank: A knowledgebase for drugs, drug actions and drug targets
-
(Database) 2238889 18048412
-
Wishart DS Knox C Guo AC Cheng D Shrivastava S Tzur D Gautam B Hassanali M DrugBank: A knowledgebase for drugs, drug actions and drug targets Nucleic acids research 2008, 36(Database):D901-906. 2238889 18048412
-
(2008)
Nucleic Acids Research
-
-
Wishart, D.S.1
Knox, C.2
Guo, A.C.3
Cheng, D.4
Shrivastava, S.5
Tzur, D.6
Gautam, B.7
Hassanali, M.8
-
26
-
-
35748962289
-
Tools for visually exploring biological networks
-
17720984
-
Suderman M Hallett M Tools for visually exploring biological networks Bioinformatics (Oxford, England) 2007, 23(20):2651-2659. 17720984
-
(2007)
Bioinformatics (Oxford, England)
, vol.23
, Issue.20
, pp. 2651-2659
-
-
Suderman, M.1
Hallett, M.2
-
27
-
-
13444266370
-
Online Mendelian Inheritance in Man (OMIM), a knowledgebase of human genes and genetic disorders
-
(Database) 539987 15608251
-
Hamosh A Scott AF Amberger JS Bocchini CA McKusick VA Online Mendelian Inheritance in Man (OMIM), a knowledgebase of human genes and genetic disorders Nucleic acids research 2005, 33(Database):D514-517. 539987 15608251
-
(2005)
Nucleic Acids Research
-
-
Hamosh, A.1
Scott, A.F.2
Amberger, J.S.3
Bocchini, C.A.4
McKusick, V.A.5
-
29
-
-
0037020329
-
Drug design strategies for targeting G-protein-coupled receptors
-
12362358
-
Klabunde T Hessler G Drug design strategies for targeting G-protein-coupled receptors Chembiochem 2002, 3(10):928-944. 12362358
-
(2002)
Chembiochem
, vol.3
, Issue.10
, pp. 928-944
-
-
Klabunde, T.1
Hessler, G.2
-
30
-
-
35148824614
-
Network pharmacology
-
17921993
-
Hopkins AL Network pharmacology Nat Biotechnol 2007, 25(10):1110-1111. 17921993
-
(2007)
Nat Biotechnol
, vol.25
, Issue.10
, pp. 1110-1111
-
-
Hopkins, A.L.1
-
31
-
-
49649087056
-
HIP2: An Online Database of Human Plasma Proteins from Healthy Individuals
-
2396660 18439290
-
Saha S Harrison S Shen C Tang H Radivojac P Arnold RJ Zhang X Chen JY HIP2: An Online Database of Human Plasma Proteins from Healthy Individuals BMC Medical Genomics 2008, 1:12. 2396660 18439290
-
(2008)
BMC Medical Genomics
, vol.1
, pp. 12
-
-
Saha, S.1
Harrison, S.2
Shen, C.3
Tang, H.4
Radivojac, P.5
Arnold, R.J.6
Zhang, X.7
Chen, J.Y.8
|