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Volumn 9, Issue SUPPL. 9, 2008, Pages

ProteoLens: A visual analytic tool for multi-scale database-driven biological network data mining

Author keywords

[No Author keywords available]

Indexed keywords

BIOMOLECULAR INTERACTIONS; DATA-DEFINITION LANGUAGES; DATABASE CONNECTIVITY; DRUG-TARGET INTERACTIONS; FUNCTIONAL ANNOTATION; PHYSIOLOGICAL FUNCTIONS; VISUAL DATA ANALYSIS; VISUALIZATION SOFTWARE;

EID: 49649091381     PISSN: None     EISSN: 14712105     Source Type: Journal    
DOI: 10.1186/1471-2105-9-S9-S5     Document Type: Conference Paper
Times cited : (31)

References (31)
  • 2
    • 0036088133 scopus 로고    scopus 로고
    • DIP, the Database of Interacting Proteins: A research tool for studying cellular networks of protein interactions
    • 99070 11752321
    • Xenarios I Salwinski L Duan XJ Higney P Kim SM Eisenberg D DIP, the Database of Interacting Proteins: A research tool for studying cellular networks of protein interactions Nucleic Acids Res 2002, 30(1):303-305. 99070 11752321
    • (2002) Nucleic Acids Res , vol.30 , Issue.1 , pp. 303-305
    • Xenarios, I.1    Salwinski, L.2    Duan, X.J.3    Higney, P.4    Kim, S.M.5    Eisenberg, D.6
  • 3
    • 0037245913 scopus 로고    scopus 로고
    • BIND: The Biomolecular Interaction Network Database
    • 165503 12519993
    • Bader GD Betel D Hogue CW BIND: The Biomolecular Interaction Network Database Nucleic Acids Res 2003, 31(1):248-250. 165503 12519993
    • (2003) Nucleic Acids Res , vol.31 , Issue.1 , pp. 248-250
    • Bader, G.D.1    Betel, D.2    Hogue, C.W.3
  • 4
    • 0036799752 scopus 로고    scopus 로고
    • Inferring domain-domain interactions from protein-protein interactions
    • 187530 12368246
    • Deng M Mehta S Sun F Chen T Inferring domain-domain interactions from protein-protein interactions Genome Res 2002, 12(10):1540-1548. 187530 12368246
    • (2002) Genome Res , vol.12 , Issue.10 , pp. 1540-1548
    • Deng, M.1    Mehta, S.2    Sun, F.3    Chen, T.4
  • 5
    • 20744456475 scopus 로고    scopus 로고
    • Correlation between gene expression profiles and protein-protein interactions within and across genomes
    • 15797912
    • Bhardwaj N Lu H Correlation between gene expression profiles and protein-protein interactions within and across genomes Bioinformatics 2005, 21(11):2730-2738. 15797912
    • (2005) Bioinformatics , vol.21 , Issue.11 , pp. 2730-2738
    • Bhardwaj, N.1    Lu, H.2
  • 6
    • 0035002541 scopus 로고    scopus 로고
    • Mining literature for protein-protein interactions
    • 11301305
    • Marcotte EM Xenarios I Eisenberg D Mining literature for protein-protein interactions Bioinformatics 2001, 17(4):359-363. 11301305
    • (2001) Bioinformatics , vol.17 , Issue.4 , pp. 359-363
    • Marcotte, E.M.1    Xenarios, I.2    Eisenberg, D.3
  • 7
    • 18744376914 scopus 로고    scopus 로고
    • Online predicted human interaction database
    • 15657099
    • Brown KR Jurisica I Online predicted human interaction database Bioinformatics 2005, 21(9):2076-2082. 15657099
    • (2005) Bioinformatics , vol.21 , Issue.9 , pp. 2076-2082
    • Brown, K.R.1    Jurisica, I.2
  • 8
    • 33845220382 scopus 로고    scopus 로고
    • IntNetDB v1.0: An integrated protein-protein interaction network database generated by a probabilistic model
    • 1661597 17112386
    • Xia K Dong D Han JD IntNetDB v1.0: An integrated protein-protein interaction network database generated by a probabilistic model BMC Bioinformatics 2006, 7:508. 1661597 17112386
    • (2006) BMC Bioinformatics , vol.7 , pp. 508
    • Xia, K.1    Dong, D.2    Han, J.D.3
  • 10
    • 84886754216 scopus 로고    scopus 로고
    • HAPP http://bio.informatics.iupui.edu/HAPPI/
    • HAPP
  • 12
    • 0038699587 scopus 로고    scopus 로고
    • Global protein function prediction from protein-protein interaction networks
    • 12740586
    • Vazquez A Flammini A Maritan A Vespignani A Global protein function prediction from protein-protein interaction networks Nat Biotechnol 2003, 21(6):697-700. 12740586
    • (2003) Nat Biotechnol , vol.21 , Issue.6 , pp. 697-700
    • Vazquez, A.1    Flammini, A.2    Maritan, A.3    Vespignani, A.4
  • 13
    • 0036421126 scopus 로고    scopus 로고
    • Protein modules and protein-protein interaction
    • 12461819
    • Janin J Wodak SJ Protein modules and protein-protein interaction. Introduction Adv Protein Chem 2002, 61:1-8. 12461819
    • (2002) Introduction Adv Protein Chem , vol.61 , pp. 1-8
    • Janin, J.1    Wodak, S.J.2
  • 14
    • 20644451616 scopus 로고    scopus 로고
    • Data Mining in Protein Interactomics: Six Computational Research Challenges and Opportunities
    • Chen JY Sivachenko A Data Mining in Protein Interactomics: Six Computational Research Challenges and Opportunities IEEE Magazine in Biology and Medicine 2005, 24(3):95-102.
    • (2005) IEEE Magazine in Biology and Medicine , vol.24 , Issue.3 , pp. 95-102
    • Chen, J.Y.1    Sivachenko, A.2
  • 15
    • 36849004088 scopus 로고    scopus 로고
    • PathFinder: Mining signal transduction pathway segments from protein-protein interaction networks
    • 2100073 17854489
    • Bebek G Yang J PathFinder: Mining signal transduction pathway segments from protein-protein interaction networks BMC Bioinformatics 2007, 8:335. 2100073 17854489
    • (2007) BMC Bioinformatics , vol.8 , pp. 335
    • Bebek, G.1    Yang, J.2
  • 19
    • 23144466889 scopus 로고    scopus 로고
    • VisANT: Data-integrating visual framework for biological networks and modules
    • (Web Server). 1160192 15980487
    • Hu Z Mellor J Wu J Yamada T Holloway D Delisi C VisANT: Data-integrating visual framework for biological networks and modules Nucleic acids research 2005, 33(Web Server):W352-357. 1160192 15980487
    • (2005) Nucleic Acids Research
    • Hu, Z.1    Mellor, J.2    Wu, J.3    Yamada, T.4    Holloway, D.5    Delisi, C.6
  • 20
    • 3242891071 scopus 로고    scopus 로고
    • WebInterViewer: Visualizing and analyzing molecular interaction networks
    • (Web Server) 441600 15215357
    • Han K Ju BH Jung H WebInterViewer: Visualizing and analyzing molecular interaction networks Nucleic acids research 2004, 32(Web Server):W89-95. 441600 15215357
    • (2004) Nucleic Acids Research
    • Han, K.1    Ju, B.H.2    Jung, H.3
  • 21
    • 33747832812 scopus 로고    scopus 로고
    • BiologicalNetworks: Visualization and analysis tool for systems biology
    • (Web Server) 1538788 16845051
    • Baitaluk M Sedova M Ray A Gupta A BiologicalNetworks: Visualization and analysis tool for systems biology Nucleic acids research 2006, 34(Web Server):W466-471. 1538788 16845051
    • (2006) Nucleic Acids Research
    • Baitaluk, M.1    Sedova, M.2    Ray, A.3    Gupta, A.4
  • 22
    • 0242559054 scopus 로고    scopus 로고
    • Pathway studio - The analysis and navigation of molecular networks
    • 14594725
    • Nikitin A Egorov S Daraselia N Mazo I Pathway studio - the analysis and navigation of molecular networks Bioinformatics (Oxford, England) 2003, 19(16):2155-2157. 14594725
    • (2003) Bioinformatics (Oxford, England) , vol.19 , Issue.16 , pp. 2155-2157
    • Nikitin, A.1    Egorov, S.2    Daraselia, N.3    Mazo, I.4
  • 26
    • 35748962289 scopus 로고    scopus 로고
    • Tools for visually exploring biological networks
    • 17720984
    • Suderman M Hallett M Tools for visually exploring biological networks Bioinformatics (Oxford, England) 2007, 23(20):2651-2659. 17720984
    • (2007) Bioinformatics (Oxford, England) , vol.23 , Issue.20 , pp. 2651-2659
    • Suderman, M.1    Hallett, M.2
  • 27
    • 13444266370 scopus 로고    scopus 로고
    • Online Mendelian Inheritance in Man (OMIM), a knowledgebase of human genes and genetic disorders
    • (Database) 539987 15608251
    • Hamosh A Scott AF Amberger JS Bocchini CA McKusick VA Online Mendelian Inheritance in Man (OMIM), a knowledgebase of human genes and genetic disorders Nucleic acids research 2005, 33(Database):D514-517. 539987 15608251
    • (2005) Nucleic Acids Research
    • Hamosh, A.1    Scott, A.F.2    Amberger, J.S.3    Bocchini, C.A.4    McKusick, V.A.5
  • 29
    • 0037020329 scopus 로고    scopus 로고
    • Drug design strategies for targeting G-protein-coupled receptors
    • 12362358
    • Klabunde T Hessler G Drug design strategies for targeting G-protein-coupled receptors Chembiochem 2002, 3(10):928-944. 12362358
    • (2002) Chembiochem , vol.3 , Issue.10 , pp. 928-944
    • Klabunde, T.1    Hessler, G.2
  • 30
    • 35148824614 scopus 로고    scopus 로고
    • Network pharmacology
    • 17921993
    • Hopkins AL Network pharmacology Nat Biotechnol 2007, 25(10):1110-1111. 17921993
    • (2007) Nat Biotechnol , vol.25 , Issue.10 , pp. 1110-1111
    • Hopkins, A.L.1


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.