Characterization of glycosyl hydrolase family 3 β-N-acetylglucosaminidases from Thermotoga maritima and Thermotoga neapolitana

Journal of Bioscience and Bioengineering

Volumn 108, Issue 6, 2009, Pages 455-459

  Choi, Kyoung Hwa ^a   Seo, Ja Yeong ^a   Park, Kyung Min ^a   Park, Cheon Seok ^b   Cha, Jaeho ^a  

^a Pusan National University   (South Korea)

^b Kyung Hee University   (South Korea)

Author keywords

N acetylglucosaminidase; Glycosyl hydrolase family 3; Kinetics; Thermostability; Thermotoga species

Indexed keywords

A-CARBON; CATALYTIC DOMAINS; CHITIN OLIGOSACCHARIDE; CHITOBIOSE; CHITOOLIGOMERS; CHITOOLIGOSACCHARIDES; D-GALACTOSAMINE; D-GALACTOSE; D-GLUCOSE; GENES ENCODING; GLUCOSAMINES; GLYCOSIDE HYDROLASES; GLYCOSYL HYDROLASE FAMILY 3; GLYCOSYL HYDROLASES; HOMODIMERS; N-ACETYLGLUCOSAMINE; N-ACETYLGLUCOSAMINIDASE; OPTIMAL TEMPERATURE; REDUCING ENDS; SEPHACRYL S-200; SYNTHETIC SUBSTRATES; THERMOSTABILITY; THERMOTOGA MARITIMA; THERMOTOGA SPECIES; THERMOTOGANEAPOLITANA;

CHITIN; CHROMATOGRAPHIC ANALYSIS; COLUMN CHROMATOGRAPHY; ENZYMES; ESCHERICHIA COLI; GLUCOSE; SUBSTRATES;

CATALYSTS;

4 NITROPHENYL BETA DEXTRO GALACTOSE; 4 NITROPHENYL BETA DEXTRO GLUCOSE; 4 NITROPHENYL DI N ACETYL BETA DEXTRO CHITOBIOSE; 4 NITROPHENYL N ACETYL BETA DEXTRO GALACTOSAMINE; 4 NITROPHENYL N ACETYL BETA DEXTRO GLUCOSAMINE; 4 NITROPHENYL TRI N ACETYL BETA DEXTRO CHITOTRIOSE; BETA N ACETYLHEXOSAMINIDASE; CARBOHYDRATE DERIVATIVE; CHITIN; HOMODIMER; N ACETYL BETA GLUCOSAMINIDASE; OLIGOSACCHARIDE; UNCLASSIFIED DRUG;

ARTICLE; BACTERIAL GENE; CARBON SOURCE; CONTROLLED STUDY; ENZYMATIC DEGRADATION; ENZYME ACTIVE SITE; ENZYME ACTIVITY; ENZYME KINETICS; ENZYME SPECIFICITY; ENZYME STABILITY; ENZYME SUBSTRATE; ESCHERICHIA COLI; HYDROLYSIS; MOLECULAR CLONING; MOLECULAR WEIGHT; NONHUMAN; NUCLEOTIDE SEQUENCE; PH; POLYMERIZATION; PROTEIN FAMILY; SEQUENCE ANALYSIS; TEMPERATURE SENSITIVITY; THERMOSTABILITY; THERMOTOGA MARITIMA; THERMOTOGA NEAPOLITANA;

ACETYLGLUCOSAMINE; ACETYLGLUCOSAMINIDASE; AMINO ACID SEQUENCE; CHITIN; CLONING, MOLECULAR; DISACCHARIDES; ELECTROPHORESIS, POLYACRYLAMIDE GEL; MOLECULAR WEIGHT; OLIGOSACCHARIDES; SEQUENCE ALIGNMENT; SEQUENCE HOMOLOGY, AMINO ACID; SUBSTRATE SPECIFICITY; THERMOTOGA MARITIMA; THERMOTOGA NEAPOLITANA; TRISACCHARIDES;

ESCHERICHIA COLI; THERMOTOGA; THERMOTOGA MARITIMA; THERMOTOGA NEAPOLITANA; THERMOTOGA SP.;

EID: 70449374951     PISSN: 13891723     EISSN: None     Source Type: Journal    
DOI: 10.1016/j.jbiosc.2009.06.003     Document Type: Article

References (25)

1. Bronnenmeier K., Kern A., Liebl W., and Staudenbauer W.L. Purification of Thermotoga maritima enzymes for the degradation of cellulosic materials. Appl. Environ. Microbiol. 61 (1995) 1399-1407
2. Zverlov V.V., Volkov I.Y., Velikodvorskaya T.V., and Schwarz W.H. Thermotoga neapolitana bgalB gene, upstream of lamA encodes a highly thermostable β-glucosidase that a laminaribiase. Microbiology 143 (1997) 3537-3542
3. Bibel M., Brettl C., Gosslar U., Kriegshauser G., and Liebl W. Isolation and analysis of genes for amylolytic enzymes of the hyperthermophilic bacterium Thermotoga maritima. FEMS Microbiol. Lett. 158 (1998) 9-15
4. Bandlish R.K., Michael Hess J., Epting K.L., Vieille C., and Kelly R.M. Glucose-to-fructose conversion at high temperatures with xylose (glucose) isomerases from Streptomyces murinus and two hyperthermophilic Thermotoga species. Biotechnol. Bioeng. 80 (2002) 185-194
5. Kim B.C., Lee Y.H., Lee H.S., Lee D.W., Choe E.A., and Pyun Y.R. Cloning, expression and characterization of l-arabinose isomerase from Thermotoga neapolitana: bioconversion of d-galactose to d-tagatose using the enzyme. FEMS Microbiol. Lett. 212 (2002) 121-126
6. Suresh C., Rus d A.A., Kitaoka M., and Hayashi K. Evidence that the putative α-glucosidase of Thermotoga maritima MSB8 is a pNP α-d-glucuronopyranoside hydrolyzing alpha-glucuronidase. FEBS Lett. 517 (2002) 159-162
7. Chhabra S.R., Shockley K.R., Conners S.B., Scott K.L., Wolfinger R.D., and Kelly R.M. Carbohydrate-induced differential gene expression patterns in the hyperthermophilic bacterium Thermotoga maritima. J. Biol. Chem. 278 (2003) 7540-7552
8. Conners S.B., Montero C.I., Comfort D.A., Shockley K.R., Johnson M.R., Chhabra S.R., and Kelly R.M. An expression-driven approach to the prediction of carbohydrate transport and utilization regulons in the hyperthermophilic bacterium Thermotoga maritima. J. Bacteriol. 187 (2005) 7267-7282
9. Nguyen T.N., Ejaz A.D., Brancieri M.A., Mikula A.M., Nelson K.E., Gill S.R., and Noll K.M. Whole-genome expression profiling of Thermotoga maritima in response to growth on sugars in a chemostat. J. Bacteriol. 186 (2004) 4824-4828
10. Li X., and Roseman S. The chitinolytic cascade in Vibrios is regulated by chitin oligosaccharides and a two-component chitin catabolic sensor/kinase. Proc. Natl. Acad. Sci. USA 101 (2004) 627-631
11. Meibom K.L., Li X.B., Nielson A.T., Wu C.Y., Roseman S., and Schoolnik G.K. The Vibrio cholerae chitin utilization program. Proc. Natl. Acad. Sci. U. S. A. 101 (2004) 2524-2529
12. Nelson K.E., Clayton R.A., Gill R.A., Gwinn M.L., Dodson R.J., Haft D.H., Hickey E.K., Peterson J.D., Nelson W.C., Ketchum K.A., et al. Evidence for lateral gene transfer between archaea and bacteria from genome sequence of Thermotoga maritima. Nature 399 (1999) 323-329
13. Bassler B.L., Yu C., Lee Y.C., and Roseman S. Chitin utilization by marine bacteria: degradation and catabolism of chitin oligosaccharides by Vibrio furnissii. J. Biol. Chem. 266 (1991) 24276-24286
14. Shaikh S.A., and Deshpande M.V. Chitinolytic enzymes: their contribution to basic and applied research. World J. Microbiol. Biotechnol. 9 (1993) 468-475
15. Soto-Gil R.W., and Zyskind J.W. N,N′-Diacetylchitobiase of Vibrio harveyi. J. Biol. Chem. 264 (1989) 14778-14783
16. Park T.H., Choi K.W., Park C.S., Lee S.B., Kang H.Y., Shon K.J., Park J.S., and Cha J. Substrate specificity and transglycosylation catalyzed by a thermostable β-glucosidase form marine hyperthermophile Thermotoga neapolitana. Appl. Microbiol. Biotechnol. 69 (2005) 411-422
17. Mayer C., Vocadlo D.J., and Withers S.G. β-N-acetylhexosaminidases: two enzyme families, two mechanisms, p. 612-619. In: Peter M.G., Domard A., and Muzzarelli R.A.A. (Eds). Advances in Chitin Science (2000), University of Potsdam, Potsdam
18. Tsujibo H., Hatano N., Mikami T., Hirasawa A., Miyamoto K., and Inamori Y. A novel β-N-acetylglucosaminidase from Streptomyces thermoviolaceus OPC-520: gene cloning, expression, and assignment to family 3 of the glycosyl hydrolases. Appl. Environ. Microbiol. 64 (1998) 2920-2924
19. Li H., Morimoto K., Katagiri N., Kimura T., Sakka K., Lun S., and Ohmiya K. A novel β-N-acetylglucosaminidase of Clostridium paraputrificum M-21 with high activity on chitobiose. Appl. Microbiol. Biotechnol. 60 (2002) 420-427
20. Cheng Q., Li H., Merdek K., and Park J.T. Molecular characterization of the β-N-acetylglucosaminidase of Escherichia coli and its role in cell wall recycling. J. Bacteriol. 182 (2000) 4836-4840
21. Chitlaru E., and Roseman S. Molecular cloning and characterization of a novel β-N-acetylglucosaminidase from Vibrio furnissii. J. Biol. Chem. 271 (1996) 33433-33439
22. Morimoto K., Karita S., Kimura T., Sakka K., and Ohmiya K. Sequencing, expression, and transcription analysis of the Clostridium paraputrificum chiA gene encoding chitinase ChiA. Appl. Microbiol. Biotechnol. 51 (1999) 340-347
23. Morimoto K., Karita S., Kimura T., Sakka K., and Ohmiya K. Characterization of Clostridium paraputrificum chitinase A from a recombinant Escherichia coli. J. Biosci. Bioeng. 92 (2001) 466-468
24. Ueda M., and Arai M. Purification and some properties of chitinase from Aeromonas sp. No. 10S-24. Biosci. Biotechnol. Biochem. 56 (1991) 460-464
25. Watanabe T., Oyanagi W., Suzuki K., and Tanaka H. Chitinase system of Bacillus circulans WL-12 and importance of chitinase A1 in chitin degradation. J. Bacteriol. 172 (1990) 4017-4022