Molecular methods for detecting and discriminating Shigella associated with foods and human clinical infections - A review

Food Biotechnology

Volumn 23, Issue 3, 2009, Pages 214-228

  Levin, Robert E ^a  

^a UNIVERSITY OF MASSACHUSETTS   (United States)

Author keywords

Detection; Foods; Molecular typing; PCR; Review; Shigella

Indexed keywords

DETECTION; FOODS; MOLECULAR TYPING; PCR; SHIGELLA;

ASSAYS;

ESCHERICHIA COLI;

ESCHERICHIA COLI; SHIGELLA; SHIGELLA BOYDII; SHIGELLA DYSENTERIAE; SHIGELLA FLEXNERI;

EID: 70449366628     PISSN: 08905436     EISSN: 15324249     Source Type: Journal    
DOI: 10.1080/08905430903102729     Document Type: Article

References (45)

1. Al-Hasani, K.K., Rajakumar, K., Bulach, D., Robinson-Browne, R., Adler, B., Sakellaris, H. (2001). Genetic organization of the she pathogenicity island in Shigella flexneri 2a. Microb. Pathogen. 30:1-8.
2. Bernardoni, M., Mounier, J., d'Hauteville, H., Coquis-Rondon, M., Sansonetti, P. (1989). Identification of icsA, a plasmid locus in Shigella flexneri that governs bacterial intra- and intercellular spread through interaction with F-actin. Proc. Natl. Acad. Sci. USA. 86:3867-3871.
3. Brian, M., Rosolono, M., Muray, B., Mirandea, A., Lopez, E., Gomez, H., Cleary, T. (1992). Polymerase chain reaction for diagmosis of enterohemorrhagic Escherichia coli infection and hemolytic-uremic syndrome. J. Clin. Microbiol. 30:1801-1806.
4. Brandal, L., Lindstedt, B., Aas, L., Stavnes, T.S., Lassen, J., Kapperud, G. (2007). Octaplex PCR and fluorescence-based capillary electrophoresis for identification of human diarrheagenic Escherichia coli and Shigella spp. J. Microbiol. Meth. 68:331-341.
5. Coimbra, R., Nicastro, G., Grimont, P., Grimont, F. (2001). Computer identification of Shigella species by rRNA restriction patterns. Res. Microbiol. 152:47-55.
6. Frankel, G., Giron, J., Valmassoi, J., Schoolnik, G. (1989). Multigene amplification: Simultaneous detection of three virulence genes in diarrhoeal stool. Mol. Microbiol. 3:1729-1734.
7. Frankel, G., Riley, L., Giron, J., Valmassoi, J., Friedman, A., Strockbine, N., Falkow, S., Schoolnik, G. (1990). Detection of Shigella in feces using DNA amplification. J. Infect Dis. 161:1252-1256.
8. Goldberg, M., Baru, O., Parsot, C., Sansonetti, J. (1993). Unipolar localization and ATPase activity of IcsA a Shigella flexneri protein involved in intracellular movement. J. Bacteriol. 175:2189-2196.
9. Hartman, A., Venkatesan, M., Oaks, E., van Buysse, J. (1990). Sequence and molecular characterization of multicopy invasion plasmid antigen gene, ipaH, of Shigella flexneri. J. Bacteriol. 172:1905-1915.
10. High, N., Mounier, J., Provost, C., Sansoneatti, P. (1992). IpaB of Shigella flexneri causes entry into epithelial dells an escape from tehphagoytaic vacuole. EMBO J. 11:1991-1999.
11. Hong, B., Jiang, L., Hu, Y., Fang, D., Guo, H. (2004). Application of oligonucleotide array technology for the rapid detection of pathogenic bacteria of food-borne infections. J. Microbiol. Meth. 58:403-411.
12. Houng, H., Sethabutr, O., Escheverria, P. (1997). A simple polymerase chain reaction technique to detect and differentiate Shigella and enteroinvasive Escherichia coli in human feces. Diagn. Microbiol. Infect. Dis. 28:189-225.
13. Kariuki, S., Muthotho, N., Kimari, J., Waiyaki, P., Hart, C., Gilks, C. (1996). Molecular typing of multidrug resistant Shigella dysenteriae type 1 by plasmid analysis and pulsed field gel electrophoresis. Trans. Royal Soc. Tropical Med and Hyg. 90:712-714.
14. Kong, R., Lee, S., Law, T., Law, R.S. (2002). Rapid detection of six types of bacterial pathogens in marine waters by multiplex PCR. Water Res. 36:2802-2812.
15. Lampel, K., Jagow, J., Truckness, M., Hill, W. (1990). Polymerase chain reaction for detection of invasive Shigella flexneri in food. Appl. Environ. Microbiol. 56:1536-1540.
16. Lan, R., Reeves, P. (2002). Escherichia coli in disguise: Molecular origins of Shigella. Microbes and Infect. 4:1125-1132.
17. Li, Y., Mustapha, A. (2004a). Development of a polymerase chain reaction assay to detect enteric bacteria in ground beef. Food Microbiol. 21:369-375.
18. Li, Y., Mustapha, A. (2004b). Simultaneous detection of Escherichia coli O157:H7, Salmonella, and Shigella in apple cider and produce by a multiplex PCR. J. Food Protect. 67:27-33.
19. Li, Y., Zhuang, S., Mustapha, A. (2005). Application of a multiplex PCR for the simultaneous detection of Escherichia coli O157:H7, Salmonella, and Shigella in raw and ready-to-eat meat products. Meat Sci. 71:402-406.
20. Lopez-Saucedo, C., Cema, J., Vilegas-Sepulved, N., Thompson, R., VXelaxquez, F., Torres, J., Tarr, P., Estrada-Garcia, T. (2003). Single multiplex polymerase chain reaction to detect diverse loci associated with diarrheagenic Escherichia coli. Emerg. Infect. Dis. 9:127-131.
21. Luo, W., Wang, S., Peng, X. (2002). Identification of shiga toxin-producing bacteria by a new immuno-capture toxin gene PCR. FEMS Microbiol. Lett. 216:39-42.
22. Lüscher, D., Altwegg, M. (1994). Detection of shigellae, enteroinvasive, and enterotoxigenic Escherichia coli using the polymerase chain reaction (PCR) in patients returning from tropical countries. Molec. Cell. Probes. 8:285-290.
23. Makino, S.C., Kamata, K., Kurata, T., Yoshikawa, M. (1989). A genetic determinant required for continuous reinfection of adjacent cells on large plasmid in Shigella flexneri 2a. Cell. 46:551-555.
24. Moss, J., Cardoz, T., Zychlinsky, A., Groisman, E. (1999). The selC-associated SHI-2 pathogenicity island of Shigella flexneri. Mol. Microbiol. 33:74-83.
25. Ménard, R., Sansonetti, P., Parsot, C., Vasselon, T. (1994). The ipaB and IpaC invasions of Shigella flexneri associate in the extracellular medium and partitioned in the cytoplasm by a specific chaperon. Cell. 76:829-839.
26. Munshi, M., Haider, K., Rahaman, M., Sack, D., Ahmed, Z., Oroshed, M. (1987). Plasmid-mediated resistance to nalidixic acid in Shigella dysenteriae type 1. The Lancet. 22:419-423.
27. Navia, M., Gascon, J., Vila, J. (2005). Genetic diversity of Shigella species from different intercontinental sources. Infect. Gen. Evol. 5:349-353.
28. Palchaudhuri, S., Kumar, R., Sen, D., Pal, R., Ghosh, S., Sarkar, B., Bhattaharya, S., Pal, S. (1985). Molecular epidemiology of plasmid patterns in Shigella dysenteriae type I obtained from an outbreak in West Bengal (India). FEMS Microbiol. Lett. 30:187-191.
29. Paton, J., Paton, A. (1998). Pathogenesis and diagnosis of Shiga toxin-producing Escherichia coli infections. Clin. Microbiol. Rev. 11:450-479.
30. Rappelli, P., Maddau, G., Mannu, F., Colombo, M., Fiori, P., Cappuccinelli, P. (2001). Development of a set of multiplex PCR assays for the simultaneous identification of enterotoxigenic, enteropathogenic, enterohemorrhagic, and enteroinvasive Escherichia coli. New Microbiol. 24:77-83.
31. Rajakumar, K., Sasakawa, C., Adler, B. (1997). Use of a novel approach, termed island probing, identifies the Shigella flexneri she pathogenicity island which encodes a homolog of the immunoglobulin A protease-like family of proteins. Infect. Immun. 65:4606-5614.
32. Sandvig, K. (2001). Shiga toxins. Toxicon. 39:1629-1635.
33. Sethabutr, O., Venkatesan, M., Yam, S., Pang, L., Smoak, B., Sang, W., Echeverria, P., Taylor, D., Isenbarger, D. (2000). Detection of PCR products of the ipaH gene from Shigella and enteroinvasive Escherichia coli by enzyme linked immunosorbent assay. Diag. Microbiol. Infect. Dis. 37:11-16.
34. Stephens, C., Murray, W. (2001). Pathogen evolution: How good bacteria go bad. Curr. Microbiol. 11:R53-R56.
35. Theron, J., Morar, D., Preez, Mk., Brözel, V., Venter, S. (2001). A sensitive semi-nested PCR method for the detection of Shigella in spiked environmental water samples. Water Res. 35:869-874.
36. Toma, C., Lu, Y., Higa, N., Nakasone, N., Chinen, I., Baschkier, A., Rivas, M., Iwanaga, M. (2003). Multiplex PCR assay for identification of human diarrheagenic Escherichia coli. J. Clin. Microbiol. 41:2660-2671.
37. Turner, S., Luck, S., Skellaris, H., Rajakumar, K., Adler, B. (2001). Nested deletions of the SRL pathogenicity island of Shigella flexneri 2a. J. Bacteriol. 183:5535-5543.
38. Vantarakas, A., Komninou, G., Venieri, D., Papapetropoulou, M. (2000). Development of a multiplex PCR detection of Salmonella spp. and Shigella spp. in mussels. Lett. Appl. Microbiol. 35:105-109.
39. Vidal, R., Vidal, M., Lagos, R., Levine, M., Prado, V. (2004). Multiplex PCR for diagnosis of enteric infections associated with diarrheagenic Escherichia coli. J. Clin. Microbiol. 42:1787-1789.
40. Villalobo, E., Torres, A. (1998). PCR for detection of Shigella spp. in mayonnaise. Appl. Environ. Microbiol. 64:1242-1245.
41. Wang, R., Cao, W., Cerniglia, C. (1997). Phylogenetic analysis and identification of Shigella spp. by molecular probes. Molec. Cell. Probes. 11:427-432.
42. Wang, G., Clark, C., Rodgers, F. (2002). Detection in Escherichia coli of the genes encoding the major virulence factors, the genes defining the O157:H7 serotype, and components of the type 2 Shiga toxin family by multiplex PCR. J. Clin. Microbiol. 40:3613-3619.
43. Walker, J., Vertma, N. (2002). Identification of a putative pathogenicity island in Shigella flexneri using subtractive hybridization of the S. flexneri and Escherichia coli genomes. FEMS Microbiol. Lett. 213:257-264.
44. Wei, H., Wang, Y., Li, C., Tung, S., Chiou, C. (2007). Epidemiology and evolution of genotype and antimicrobial resistance of an imported Shigella sonnei clone circulating in central Taiwan. Diag. Microbiol. Infect. Dis. 58:469-475.
45. Zychlinsky, A., Kenny, B., Menard, M., Provost, C., Holland, B., Sansonetti, P. (1994). IpaB mediates macrophage apoptosis induced by Shigella flexneri. Mol. Microbiol. 11:619-617.