메뉴 건너뛰기




Volumn , Issue , 2009, Pages 407-415

Drosophila gene expression pattern annotation using sparse features and term-term interactions

Author keywords

Gene expression pattern; Image annotation, bag of words; Regularization; Sparse learning

Indexed keywords

ANALYTICAL SOLUTIONS; ANNOTATION PERFORMANCE; BAG OF WORDS; FEATURE REPRESENTATION; GENE EXPRESSION PATTERN; GENE EXPRESSION PATTERNS; GENE FUNCTION; GENOME PROJECTS; IMAGE ANNOTATION, BAG-OF-WORDS; LEARNING FORMULATION; LEARNING TECHNIQUES; LOCAL REGULARIZATION; MULTIPLE VIEWS; OPTIMIZATION PROBLEMS; QUANTIZATION ERRORS; REGULARIZATION; SPARSE LEARNING; TEMPORAL DYNAMICS; VISUAL RECOGNITION;

EID: 70350677092     PISSN: None     EISSN: None     Source Type: Conference Proceeding    
DOI: 10.1145/1557019.1557068     Document Type: Conference Paper
Times cited : (29)

References (27)
  • 1
    • 55149088329 scopus 로고    scopus 로고
    • Convex multi-task feature learning
    • A. Argyriou, T. Evgeniou, and M. Pontil. Convex multi-task feature learning. Machine Learning, 73(3):243-272, 2008.
    • (2008) Machine Learning , vol.73 , Issue.3 , pp. 243-272
    • Argyriou, A.1    Evgeniou, T.2    Pontil, M.3
  • 4
    • 41949085885 scopus 로고    scopus 로고
    • A quantitative spatiotemporal atlas of gene expression in the Drosophila blastoderm
    • April
    • C. C. Fowlkes and et al. A quantitative spatiotemporal atlas of gene expression in the Drosophila blastoderm. Cell, 133(2):364-374, April 2008.
    • (2008) Cell , vol.133 , Issue.2 , pp. 364-374
    • Fowlkes, C.C.1    and et, al.2
  • 6
    • 13244268372 scopus 로고    scopus 로고
    • Identifying spatially similar gene expression patterns in early stage fruit fly embryo images: Binary feature versus invariant moment digital representations
    • R. Gurunathan and et al. Identifying spatially similar gene expression patterns in early stage fruit fly embryo images: binary feature versus invariant moment digital representations. BMC Bioinformatics, 5(202):13, 2004.
    • (2004) BMC Bioinformatics , vol.5 , Issue.202 , pp. 13
    • Gurunathan, R.1    and et, al.2
  • 7
    • 65549129744 scopus 로고    scopus 로고
    • A bag-of-words approach for Drosophila gene expression pattern annotation
    • S. Ji, Y.-X. Li, Z.-H. Zhou, S. Kumar, and J. Ye. A bag-of-words approach for Drosophila gene expression pattern annotation. BMC Bioinformatics, 10:119, 2009.
    • (2009) BMC Bioinformatics , vol.10 , pp. 119
    • Ji, S.1    Li, Y.-X.2    Zhou, Z.-H.3    Kumar, S.4    Ye, J.5
  • 8
    • 50549093271 scopus 로고    scopus 로고
    • Automated annotation of Drosophila gene expression patterns using a controlled vocabulary
    • S. Ji, L. Sun, R. Jin, S. Kumar, and J. Ye. Automated annotation of Drosophila gene expression patterns using a controlled vocabulary. Bioinformatics, 24(17):1881-1888, 2008.
    • (2008) Bioinformatics , vol.24 , Issue.17 , pp. 1881-1888
    • Ji, S.1    Sun, L.2    Jin, R.3    Kumar, S.4    Ye, J.5
  • 9
    • 70350650390 scopus 로고    scopus 로고
    • S. Kim, K.-A. Sohn, and E. P. Xing. A multivariate regression approach to association analysis of quantitative trait network. Technical Report CMU-ML-08-113, Carnegie Mellon University, 2008.
    • S. Kim, K.-A. Sohn, and E. P. Xing. A multivariate regression approach to association analysis of quantitative trait network. Technical Report CMU-ML-08-113, Carnegie Mellon University, 2008.
  • 10
    • 70350648257 scopus 로고    scopus 로고
    • S. Kumar and FlyExpress Consortium. A knowledgebase spatiotemporal expression patterns at a genomic-scale in the fruit-fly embryogenesis, 2009. In preparation.
    • S. Kumar and FlyExpress Consortium. A knowledgebase spatiotemporal expression patterns at a genomic-scale in the fruit-fly embryogenesis, 2009. In preparation.
  • 11
    • 12244265472 scopus 로고    scopus 로고
    • S. Kumar and et al. BEST: a novel computational approach for comparing gene expression patterns from early stages of Drosophlia melanogaster develeopment. Genetics, 169:2037-2047, 2002.
    • S. Kumar and et al. BEST: a novel computational approach for comparing gene expression patterns from early stages of Drosophlia melanogaster develeopment. Genetics, 169:2037-2047, 2002.
  • 12
    • 34848918150 scopus 로고    scopus 로고
    • Global analysis of mRNA localization reveals a prominent role in organizing cellular architecture and function
    • E. Lécuyer and et al. Global analysis of mRNA localization reveals a prominent role in organizing cellular architecture and function. Cell, 131:174-187, 2007.
    • (2007) Cell , vol.131 , pp. 174-187
    • Lécuyer, E.1    and et, al.2
  • 14
    • 3042535216 scopus 로고    scopus 로고
    • Distinctive image features from scale-invariant keypoints
    • D. G. Lowe. Distinctive image features from scale-invariant keypoints. International Journal of Computer Vision, 60(2):91-110, 2004.
    • (2004) International Journal of Computer Vision , vol.60 , Issue.2 , pp. 91-110
    • Lowe, D.G.1
  • 21
    • 64549096809 scopus 로고    scopus 로고
    • Efficient visual search for objects in videos
    • J. Sivic and A. Zisserman. Efficient visual search for objects in videos. Proceedings of the IEEE, 96(4):548-566, 2008.
    • (2008) Proceedings of the IEEE , vol.96 , Issue.4 , pp. 548-566
    • Sivic, J.1    Zisserman, A.2
  • 24
    • 0012252471 scopus 로고    scopus 로고
    • Systematic determination of patterns of gene expression during Drosophila embryogenesis
    • P. Tomancak and et al. Systematic determination of patterns of gene expression during Drosophila embryogenesis. Genome Biology, 3(12), 2002.
    • (2002) Genome Biology , vol.3 , Issue.12
    • Tomancak, P.1    and et, al.2
  • 25
    • 38349127974 scopus 로고    scopus 로고
    • Global analysis of patterns of gene expression during Drosophila embryogenesis
    • P. Tomancak and et al. Global analysis of patterns of gene expression during Drosophila embryogenesis. Genome Biology, 8(7):R145, 2007.
    • (2007) Genome Biology , vol.8 , Issue.7
    • Tomancak, P.1    and et, al.2
  • 26
    • 42149163917 scopus 로고    scopus 로고
    • Developmental stage annotation of Drosophila gene expression pattern images via an entire solution path for LDA
    • J. Ye, J. Chen, R. Janardan, and S. Kumar. Developmental stage annotation of Drosophila gene expression pattern images via an entire solution path for LDA. ACM Transactions Knowledge Discovery from Data, 2(1):1-21, 2008.
    • (2008) ACM Transactions Knowledge Discovery from Data , vol.2 , Issue.1 , pp. 1-21
    • Ye, J.1    Chen, J.2    Janardan, R.3    Kumar, S.4


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.