Genetic diversity and geographic structure in Aglaia elaeagnoidea (Meliaceae, Sapindales), a morphologically complex tree species, near the two extremes of its distribution

Blumea: Journal of Plant Taxonomy and Plant Geography

Volumn 54, Issue 1-3, 2009, Pages 207-216

  Muellner, A N ^a   Greger, H ^b   Pannell, C M ^c  

^a SENCKENBERG RESEARCH INSTITUTE   (Germany)

^b UNIVERSITY OF VIENNA   (Austria)

^c UNIVERSITY OF OXFORD   (United Kingdom)

Author keywords

Aglaia; Biogeography; Dispersal; Internal transcribed spacer (ITS); Meliaceae; Molecular clock; Sapindales

Indexed keywords

AGLAIA; AGLAIA ELAEAGNOIDEA; AGLAIA ROXBURGHIANA; MELIACEAE; SAPINDALES;

EID: 70350393699     PISSN: 00065196     EISSN: None     Source Type: Journal    
DOI: 10.3767/000651909X476175     Document Type: Article

References (45)

1. Brem B. 2002. Distribution and insecticidal properties of characteristic plant constituents from tropical Aglaia and Stemona species. PhD thesis, University of Vienna, Austria.
2. Brenner GJ. 1996. Evidence for the earliest stage of angiosperm pollen evolution: A paleoequatorial section from Israel. In: Taylor DW, Hickey LJ (eds), Flowering plant origin, evolution and phylogeny: 91-115. Chapman & Hall, New York.
3. Chandler MEJ. 1964. The lower Tertiary floras of southern England. IV. A summary and survey of findings in the light of recent botanical observations. Bulletin of the British Museum (Natural History). Geology 12: 1-151, pl. 1-4.
4. Cowan RS, Chase MW, Kress J, Savolainen V. 2006. 300,000 species to identify: problems, progress, and prospects in DNA barcoding of land plants. Taxon 55: 611-616.
5. De Jussieu AHL. 1830. Nemedra elaeagnoidea A.Juss. Memoires du Museum d'Histoire Naturelle, Paris XIX: 223.
6. Felsenstein J. 1985. Confidence limits on phylogenetics: an approach using the bootstrap. Evolution 39: 783-791.
7. Fitch WM. 1971. Toward defining the course of evolution: minimal change for a specific tree topology. Systematic Zoology 20: 406-416.
8. Fuzzati N, Dyatmiko W, Rahman A, Achmad F, Hostettmann K. 1996. Triterpenoids, lignans and a benzofuran derivative from the bark of Aglaia elaeagnoidea. Phytochemistry 42: 1395-1398.
9. Ghosh PK, Roy SK. 1979. Chisochetonoxylon benegalensis gen. et sp. nov., a new fossil wood of Meliaceae from the Tertiary beds of Birbhum District, West Bengal, India. Current Science 48: 737-739.
10. Gradstein FM, Ogg JG, Smith AG. 2004. A geologic time scale 2004. Cambridge University Press, Cambridge, United Kingdom.
11. Graham A, Jarzen DM. 1969. Studies in Neotropical paleobotany. I. The Oligocene communities of Puerto Rico. Annals of the Missouri Botanical Garden 56: 308-357.
12. Greger H, Hofer M, Teichmann K, Schinnerl J, Pannell CM, Vajrodaya S, Hofer O. 2008. Amide-esters from Aglaia tenuicaulis - first representatives of a class of compounds structurally related to bisamides and flavaglines. Phytochemistry 69: 928-938.
13. Hershkovitz MA, Zimmer EA. 1996. Conservation patterns in angiosperm rDNA ITS2 sequences. Nucleic Acids Research 24: 2857-2867.
14. Hofer M. 2002. Infraspezifische chemische Differenzierung am Beispiel von asiatischen und australischen Herkünften von Aglaia elaeagnoidea (Meliaceae). Master Thesis, University of Vienna.
15. Hughes NF. 1994. The enigma of angiosperm origins. Cambridge palaeobiology series 1. Cambridge University Press, Cambridge.
16. Jobes DV, Thien LB. 1997. A conserved motif in the 5.8S ribosomal RNA (rRNA) gene is a useful diagnostic marker for plant internal transcribed spacer (ITS) sequences. Plant Molecular Biology Reporter 15: 326-334.
17. Liu J-S, Schardl CL. 1994. A conserved sequence in internal transcribed spacer 1 of plant nuclear rRNA genes. Pl. Molec. Biol. 26: 775-778.
18. Mathews DH, Sabina J, Zuker M, Turner DH. 1999. Expanded sequence dependence of thermodynamic parameters improves prediction of RNA secondary structure. Journal of Molecular Biology 288: 911-940.
19. Muellner AN. 2008. Genetic diversity and distribution patterns of Aglaieae (Meliaceae) in Malesia. Flora Malesiana Bulletin 14: 198-201.
20. Muellner AN, Pannell CM, Coleman A, Chase MW. 2008a. The origin and evolution of Indomalesian, Australasian and Pacific island biotas: insights from Aglaieae (Meliaceae, Sapindales). Journal of Biogeography 35: 1769-1789.
21. Muellner AN, Samuel R, Chase MW, Coleman A, Stuessy TF. 2008b. An evaluation of tribes and generic relationships in Melioideae (Meliaceae) based on nuclear ITS ribosomal DNA. Taxon 57: 1-11.
22. Muellner AN, Samuel R, Chase MW, Pannell CM, Greger H. 2005. Aglaia (Meliaceae): an evaluation of taxonomic concepts based on DNA data and secondary metabolites. American Journal of Botany 92: 534-543.
23. Muellner AN, Samuel R, Johnson SA, Cheek M, Pennington TD, Chase MW. 2003. Molecular phylogenetics of Meliaceae based on nuclear and plastid DNA sequences. American Journal of Botany 90: 471-480.
24. Muellner AN, Savolainen V, Samuel R, Chase MW. 2006. The mahogany family 'out-of-Africa': divergence time estimation, global biogeographic patterns inferred from plastid rbcL DNA sequences, extant, and fossil distribution of diversity. Molecular Phylogenetics and Evolution 40: 236-250.
25. Muellner AN, Vassiliades DD, Renner SS. 2007. Placing Biebersteiniaceae, a herbaceous clade of Sapindales, in a temporal and geographic context. Plant Systematics and Evolution 266: 233-252.
26. Pannell CM. 1992. A taxonomic monograph of the genus Aglaia Lour. (Meliaceae). Kew Bulletin Additional Series XVI. HMSO, London, United Kingdom.
27. Pannell CM. 1993. A monograph of Aglaia (Meliaceae) - a correction. Kew Bulletin 48: 244.
28. Pannell CM. 1995. Aglaia. In: Mabberley DJ, Pannell CM, Sing AM (eds), Meliaceae. Flora Malesiana, Ser. I, Vol. 12: 194-314.
29. Pannell CM. 1998a. Taxonomy, ecology and reproductive biology of Aglaia (Meliaceae). In: Hopkins HCF, Huxley CR, Pannell CM, Prance GT, White F (eds), The biological monograph: The importance of field studies and functional syndromes for taxonomy and evolution of tropical plants, A Festschrift for Frank White: 59-77. Royal Botanic Gardens Kew, London, United Kingdom.
30. Pannell CM. 1998b. Species delimitation in Aglaia. In: Hopkins HCF, Huxley CR, Pannell CM, Prance GT, White F (eds), The biological monograph, The importance of field studies and functional syndromes for taxonomy and evolution of tropical plants, A Festschrift for Frank White: 124-127. Royal Botanic Gardens Kew, London, United Kingdom.
31. Pannell CM. 2004. Three new species, two new subspecies and five new combinations at the subspecific level in Aglaia Lour. (Meliaceae). Kew Bulletin 59: 87-94.
32. Posada D, Crandall KA. 1998. Modeltest: testing the model of DNA substitution. Bioinformatics 14: 817-818.
33. Rambaut A, Charleston M. 2000. Phylogenetic Tree Editor v1.0 alpha 4-61. http://evolve.zoo.ox.ac.uk/software/TreeEdit. Updated version currently available at http://tree.bio.ed.ac.uk/software/treeedit/.
34. Reid EM, Chandler MEJ. 1933. The London Clay Flora. British Museum (Natural History), London, United Kingdom.
35. Ronquist F, Huelsenbeck JP. 2003. MrBayes 3: Bayesian phylogenetic inference under mixed models. Bioinformatics 19: 1572-1574.
36. Salard-Cheboldaeff M. 1978. Sur la palynoflore Maestrichtienne et Tertiaire du basin sédimentaire littoral du Cameroun. Pollen and Spores 20: 215- 260.
37. Sanderson MJ. 1997. A nonparametric approach to estimating divergence times in the absence of rate constancy. Molecular Biology and Evolution 14: 1218-1232.
38. Stamatakis A. 2006. RAxML-VI-HPC: Maximum likelihood-based phylogenetic analyses with thousands of taxa and mixed models. Bioinformatics 22: 2688-2690.
39. Swofford DL. 2002. PAUP*: phylogenetic analysis using parsimony (*and other methods), v4. Sinauer Associates, Sunderland, Massachusetts, USA.
40. Thompson JD, Gibson TJ, Plewniak F, Jeanmougin F, Higgins DG. 1997. The ClustalX windows interface: flexible strategies for multiple sequence alignment aided by quality analysis tools. Nucleic Acids Research 24: 4876-4882.
41. Thorne JL, Kishino H. 2002. Divergence time estimation and rate evolution with multilocus data sets. Systematic Biology 51: 689-702.
42. Thorne JL, Kishino H, Painter IS. 1998. Estimating the rate of evolution of the rate of molecular evolution. Molecular Biology and Evolution 15: 1647-1657.
43. Wight RA, Walker GA. 1834. Milnea roxburghiana Wight & Arn. Prodromus Florae Peninsulae Indiae Orientalis 1: 119.
44. Yang Z. 1997. PAML: a program package for phylogenetic analysis by maximum likelihood. Computer Applications in BioSciences 13: 555-556 (http://abacus.gene.ucl.ac.uk/software/paml.html).
45. Zuker M, Mathews DH, Turner DH. 1999. Algorithms and thermodynamics for RNA secondary structure prediction: a practical guide. In: Barciszewski J, Clark BFC (eds), RNA biochemistry and biotechnology, 11-43. NATO ASI Series. Kluwer Academic Publishers, Dordrecht, Netherlands.