메뉴 건너뛰기




Volumn 12, Issue 3, 2009, Pages 153-159

Diversity and spatial distribution of metal-reducing bacterial assemblages in groundwaters of different redox conditions

Author keywords

Geobacteraceae; Groundwater; Manganese iron in aquifers; Metal reducing bacteria

Indexed keywords

BACTERIA (MICROORGANISMS); GEOBACTERACEAE;

EID: 70349858089     PISSN: 11396709     EISSN: 16181905     Source Type: Journal    
DOI: 10.2436/20.1501.01.93     Document Type: Article
Times cited : (11)

References (40)
  • 2
    • 46749150088 scopus 로고    scopus 로고
    • The tragedy of the uncommon: Understanding limitations in the analysis of microbial diversity
    • Bent SJ, Forney LJ (2008) The tragedy of the uncommon: understanding limitations in the analysis of microbial diversity. ISME J 2:689-695
    • (2008) ISME J , vol.2 , pp. 689-695
    • Bent, S.J.1    Forney, L.J.2
  • 3
    • 85047686866 scopus 로고    scopus 로고
    • History and ecology of chloroethene biodegradation: A review
    • Bradley PM (2003) History and ecology of chloroethene biodegradation: a review. Bioremediation J 7:81-109
    • (2003) Bioremediation J , vol.7 , pp. 81-109
    • Bradley, P.M.1
  • 5
    • 0037129202 scopus 로고    scopus 로고
    • Geobacter metallireducens accesses insoluble Fe(III) oxide by chemotaxis
    • Childers SE, Ciufo S, Lovley DR (2002) Geobacter metallireducens accesses insoluble Fe(III) oxide by chemotaxis. Nature 416:767-769
    • (2002) Nature , vol.416 , pp. 767-769
    • Childers, S.E.1    Ciufo, S.2    Lovley, D.R.3
  • 7
    • 0027804103 scopus 로고
    • Non-parametric multivariate analyses of changes in community structure
    • Clarke KR (1993) Non-parametric multivariate analyses of changes in community structure. Australian J Ecol 18:117-143
    • (1993) Australian J Ecol , vol.18 , pp. 117-143
    • Clarke, K.R.1
  • 8
    • 0027341499 scopus 로고
    • Reduction of Fe(III) in sediments by sulphate-reducing bacteria
    • Coleman ML, Hedrick DB, Lovley DR, White DC, Pye K (1993) Reduction of Fe(III) in sediments by sulphate-reducing bacteria. Nature 361:436-438
    • (1993) Nature , vol.361 , pp. 436-438
    • Coleman, M.L.1    Hedrick, D.B.2    Lovley, D.R.3    White, D.C.4    Pye, K.5
  • 9
    • 12244258230 scopus 로고    scopus 로고
    • Simultaneous recovery of extracellular and intracellular DNA suitable for molecular studies from marine sediments
    • Corinaldesi C, Danovaro R, Dell'Anno A (2005) Simultaneous recovery of extracellular and intracellular DNA suitable for molecular studies from marine sediments. Appl Environ Microbiol 71:46-50
    • (2005) Appl Environ Microbiol , vol.71 , pp. 46-50
    • Corinaldesi, C.1    Danovaro, R.2    Dell'Anno, A.3
  • 11
    • 51149115732 scopus 로고    scopus 로고
    • Culturable aerobic bacteria from the upstream region of a karst water rivulet
    • Cousin S, Brambilla E, Yang J, Stanckebrant E (2008) Culturable aerobic bacteria from the upstream region of a karst water rivulet. Int Microbiol 11:91-100
    • (2008) Int Microbiol , vol.11 , pp. 91-100
    • Cousin, S.1    Brambilla, E.2    Yang, J.3    Stanckebrant, E.4
  • 12
    • 0033987390 scopus 로고    scopus 로고
    • Evidence for microbial Fe(III) reduction in anoxic, mining-impacted lake sediments (Lake Coeur d'Alene, Idaho)
    • Cummings DE, March AW, Bostick B, Spring S, Caccavo F Jr, Fendorf S, Rosenzweig RF (2000) Evidence for microbial Fe(III) reduction in anoxic, mining-impacted lake sediments (Lake Coeur d'Alene, Idaho). Appl Environ Microbiol 66:154-162
    • (2000) , vol.66 , pp. 154-162
    • Cummings, D.E.1    March, A.W.2    Bostick, B.3    Spring, S.4    Caccavo Jr., F.5    Fendorf, S.6    Rosenzweig, R.F.7
  • 13
    • 85017607024 scopus 로고    scopus 로고
    • Measuring species richness based on microbial community fingerprints: The emperor has no clothes
    • Danovaro R, Luna GM, Dell'Anno A, Pietrangeli B (2007) Measuring species richness based on microbial community fingerprints: the emperor has no clothes. Appl Environ Microbiol 73:2399-2401
    • (2007) Appl Environ Microbiol , vol.73 , pp. 2399-2401
    • Danovaro, R.1    Luna, G.M.2    Dell'Anno, A.3    Pietrangeli, B.4
  • 14
    • 0021282881 scopus 로고
    • Water-rock interaction and chemistry of groundwater from the Canadian Shield
    • Frape SK, Fritz P, McNutt RH (1984) Water-rock interaction and chemistry of groundwater from the Canadian Shield. Geochim Cosmochim Acta 48:1617-1627
    • (1984) Geochim Cosmochim Acta , vol.48 , pp. 1617-1627
    • Frape, S.K.1    Fritz, P.2    McNutt, R.H.3
  • 15
    • 2942556578 scopus 로고    scopus 로고
    • Richness and diversity of bacterioplankton species along an estuarine gradient in Moreton Bay, Australia
    • Hewson I, Fuhrman JA (2004) Richness and diversity of bacterioplankton species along an estuarine gradient in Moreton Bay, Australia. Appl Environ Microbiol 70:3425-3433
    • (2004) Appl Environ Microbiol , vol.70 , pp. 3425-3433
    • Hewson, I.1    Fuhrman, J.A.2
  • 16
    • 0036249528 scopus 로고    scopus 로고
    • Enrichment of members of the family Geobacteraceae associated with stimulation of dissimilatory metal reduction in uranium-contaminated aquifer sediments
    • Holmes DE, Finneran KT, O'Neil RA, Lovley DR (2002) Enrichment of members of the family Geobacteraceae associated with stimulation of dissimilatory metal reduction in uranium-contaminated aquifer sediments. Appl Environ Microbiol 68:2300-2306
    • (2002) Appl Environ Microbiol , vol.68 , pp. 2300-2306
    • Holmes, D.E.1    Finneran, K.T.2    O'Neil, R.A.3    Lovley, D.R.4
  • 17
    • 1842685768 scopus 로고    scopus 로고
    • Microbiological comparison of core and groundwater samples collected from a fractured basalt aquifer with that of dialysis chambers incubated in situ
    • Lehman RM, O'Connell SP, Banta A, Fredrickson JK, Reysenbach A-L, Kieft TL, Colwell FS (2004) Microbiological comparison of core and groundwater samples collected from a fractured basalt aquifer with that of dialysis chambers incubated in situ. Geomicrobiol J 21:169-182
    • (2004) Geomicrobiol J , vol.21 , pp. 169-182
    • Lehman, R.M.1    O'Connell, S.P.2    Banta, A.3    Fredrickson, J.K.4    Reysenbach, A.-L.5    Kieft, T.L.6    Colwell, F.S.7
  • 18
    • 26844550212 scopus 로고    scopus 로고
    • Geobacteraceae community composition is related to hydrochemistry and biodegradation in an iron-reducing aquifer polluted by a neighboring landfill
    • Lin B, Braster M, van Breukelen BM, van Verseveld HW, Westerhoff HV, Röling WFM (2005) Geobacteraceae community composition is related to hydrochemistry and biodegradation in an iron-reducing aquifer polluted by a neighboring landfill. Appl Environ Microbiol 71:5983-5991
    • (2005) Appl Environ Microbiol , vol.71 , pp. 5983-5991
    • Lin, B.1    Braster, M.2    van Breukelen, B.M.3    van Verseveld, H.W.4    Westerhoff, H.V.5    Röling, W.F.M.6
  • 20
    • 0032415624 scopus 로고    scopus 로고
    • Anaerobic microbial redox processes in a landfill leachate contaminated aquifer (Grindsted, Denmark)
    • Ludvigsen L, Albrechtsen HJ, Heron G, Bjerg PL, Christensen TH (1998) Anaerobic microbial redox processes in a landfill leachate contaminated aquifer (Grindsted, Denmark). J Contam Hydrol 33:273-291
    • (1998) J Contam Hydrol , vol.33 , pp. 273-291
    • Ludvigsen, L.1    Albrechtsen, H.J.2    Heron, G.3    Bjerg, P.L.4    Christensen, T.H.5
  • 21
    • 33644871362 scopus 로고    scopus 로고
    • DNAextraction procedure: A critical issue for bacterial diversity assessment in marine sediments
    • Luna GM, Dell'Anno A, Danovaro R (2006) DNAextraction procedure: a critical issue for bacterial diversity assessment in marine sediments. Environ Microbiol 8:308-320
    • (2006) Environ Microbiol , vol.8 , pp. 308-320
    • Luna, G.M.1    Dell'Anno, A.2    Danovaro, R.3
  • 22
    • 0036300808 scopus 로고    scopus 로고
    • Large fraction of dead and inactive bacteria in coastal marine sediments: Comparison of protocols for determination and ecological significance
    • Luna GM, Manini E, Danovaro R (2002) Large fraction of dead and inactive bacteria in coastal marine sediments: comparison of protocols for determination and ecological significance. Appl Environ Microbiol 68:3509-3513
    • (2002) Appl Environ Microbiol , vol.68 , pp. 3509-3513
    • Luna, G.M.1    Manini, E.2    Danovaro, R.3
  • 23
    • 0026918535 scopus 로고
    • Fate of organic contaminants in the redox zones of a landfill leachate pollution plume (Vejen, Denmark)
    • Lyngkilde J, Christensen TH (1992) Fate of organic contaminants in the redox zones of a landfill leachate pollution plume (Vejen, Denmark). J Contam Hydrol 10:291-307
    • (1992) , vol.10 , pp. 291-307
    • Lyngkilde, J.1    Christensen, T.H.2
  • 24
    • 10444289906 scopus 로고    scopus 로고
    • Molecular characterization of a dechlorinating community resulting from in situ biostimulation in a trichloroethene-contaminated deep, fractured basalt aquifer and comparison to a derivative laboratory culture
    • Macbeth TW, Cummings DE, Spring S, Petzke LM, Sorenson KS Jr (2004) Molecular characterization of a dechlorinating community resulting from in situ biostimulation in a trichloroethene-contaminated deep, fractured basalt aquifer and comparison to a derivative laboratory culture. Appl Environ Microbiol 70:7329-7341
    • (2004) Appl Environ Microbiol , vol.70 , pp. 7329-7341
    • Macbeth, T.W.1    Cummings, D.E.2    Spring, S.3    Petzke, L.M.4    Sorenson Jr., K.S.5
  • 25
    • 4444347893 scopus 로고    scopus 로고
    • Geochemistry, radio-carbon ages and paleorecharge conditions along a transect in the central High Plains aquifer, southwestern Kansas, USA
    • McMahon PB, Bohlke JK, Christenson SC (2004) Geochemistry, radio-carbon ages and paleorecharge conditions along a transect in the central High Plains aquifer, southwestern Kansas, USA. Appl Geochem 19:1655-1686
    • (2004) Appl Geochem , vol.19 , pp. 1655-1686
    • McMahon, P.B.1    Bohlke, J.K.2    Christenson, S.C.3
  • 26
    • 40149098736 scopus 로고    scopus 로고
    • Redox processes and water quality of selected principal aquifer systems
    • McMahon PB, Chapelle FH (2008) Redox processes and water quality of selected principal aquifer systems. Ground Water 46:259-217
    • (2008) Ground Water , vol.46 , pp. 259-217
    • McMahon, P.B.1    Chapelle, F.H.2
  • 27
    • 0033152351 scopus 로고    scopus 로고
    • Terminal-restriction fragment length polymorphism (T-RFLP): An emerging method for characterizing diversity among homologous populations of amplicons
    • Marsh TL (1999) Terminal-restriction fragment length polymorphism (T-RFLP): an emerging method for characterizing diversity among homologous populations of amplicons. Curr Opin Microbiol 2:323-327
    • (1999) Curr Opin Microbiol , vol.2 , pp. 323-327
    • Marsh, T.L.1
  • 28
    • 0036252368 scopus 로고    scopus 로고
    • Mechanisms for Fe(III) oxide reduction in sedimentary environments
    • Nevin KP, Lovley DR (2002) Mechanisms for Fe(III) oxide reduction in sedimentary environments. Geomicrobiol J 19:141-159
    • (2002) Geomicrobiol J , vol.19 , pp. 141-159
    • Nevin, K.P.1    Lovley, D.R.2
  • 29
    • 0034604081 scopus 로고    scopus 로고
    • A role for excreted quinones in extracellular electron transfer
    • Newman DK, Kolter R (2000) A role for excreted quinones in extracellular electron transfer. Nature 405:94-97
    • (2000) Nature , vol.405 , pp. 94-97
    • Newman, D.K.1    Kolter, R.2
  • 30
    • 70349886063 scopus 로고    scopus 로고
    • Purging and sampling device selection and operation
    • In: Nielsen DM, Nielsen GL (eds), CRC Press, Boca Raton, FL, USA
    • Nielsen DM (2006) Purging and sampling device selection and operation. In: Nielsen DM, Nielsen GL (eds) The essential handbook of ground-water sampling. CRC Press, Boca Raton, FL, USA, pp 55-98
    • (2006) The essential handbook of ground-water sampling , pp. 55-98
    • Nielsen, D.M.1
  • 31
    • 0001679973 scopus 로고    scopus 로고
    • Use of SYBR Green I for rapid epifluo-rescence counts of marine viruses and bacteria
    • Noble RT, Fuhrman JA (1998) Use of SYBR Green I for rapid epifluo-rescence counts of marine viruses and bacteria. Aquat Microb Ecol 14:113-118
    • (1998) Aquat Microb Ecol , vol.14 , pp. 113-118
    • Noble, R.T.1    Fuhrman, J.A.2
  • 32
    • 0031711754 scopus 로고    scopus 로고
    • Bias in template-to-product ratios in multitemplate PCR
    • Polz MF, Cavanaugh CM (1998) Bias in template-to-product ratios in multitemplate PCR. Appl Environ Microbiol 64:3724-3730
    • (1998) Appl Environ Microbiol , vol.64 , pp. 3724-3730
    • Polz, M.F.1    Cavanaugh, C.M.2
  • 34
    • 8144228112 scopus 로고    scopus 로고
    • Composition and diversity of microbial communities recovered from surrogate minerals incubated in an acidic uranium-contaminated aquifer
    • Reardon CL, Cummings D, Petzke LM, Kinsall BL, Watson DB, Peyton BM, Geesey GG (2004) Composition and diversity of microbial communities recovered from surrogate minerals incubated in an acidic uranium-contaminated aquifer. Appl Environ Microbiol 70:6037-6046
    • (2004) Appl Environ Microbiol , vol.70 , pp. 6037-6046
    • Reardon, C.L.1    Cummings, D.2    Petzke, L.M.3    Kinsall, B.L.4    Watson, D.B.5    Peyton, B.M.6    Geesey, G.G.7
  • 35
    • 0035491310 scopus 로고    scopus 로고
    • Relationships between microbial community structure and hydrochemistry in a landfill leachate-polluted aquifer
    • Röling WFM, van Breukelen BM, Braster M, Lin B, van Verseveld HW (2001) Relationships between microbial community structure and hydrochemistry in a landfill leachate-polluted aquifer. Appl Environ Microbiol 67:4619-4629
    • (2001) Appl Environ Microbiol , vol.67 , pp. 4619-4629
    • Röling, W.F.M.1    van Breukelen, B.M.2    Braster, M.3    Lin, B.4    van Verseveld, H.W.5
  • 36
    • 0032976385 scopus 로고    scopus 로고
    • Microbial communities associated with anaerobic benzene degradation in a petroleum-contaminated aquifer
    • Rooney-Varga J, Anderson RT, Fraga JL, Ringelberg D, Lovley DR (1999) Microbial communities associated with anaerobic benzene degradation in a petroleum-contaminated aquifer. Appl Environ Microbiol 65:3056-3063
    • (1999) Appl Environ Microbiol , vol.65 , pp. 3056-3063
    • Rooney-Varga, J.1    Anderson, R.T.2    Fraga, J.L.3    Ringelberg, D.4    Lovley, D.R.5
  • 37
    • 47049094874 scopus 로고    scopus 로고
    • Geobacter uraniireducens sp. nov., isolated from subsurface sediment undergoing uranium bioremediation
    • Shelobolina ES, Vrionis HA, Findlay RH, Lovley DR (2008) Geobacter uraniireducens sp. nov., isolated from subsurface sediment undergoing uranium bioremediation. Int J Syst Evol Microbiol 58:1075-1078
    • (2008) Int J Syst Evol Microbiol , vol.58 , pp. 1075-1078
    • Shelobolina, E.S.1    Vrionis, H.A.2    Findlay, R.H.3    Lovley, D.R.4
  • 38
    • 0036219601 scopus 로고    scopus 로고
    • A review of the source, behaviour, and distribution of arsenic in natural waters
    • Smedley PL, Kinniburgh DG (2002) A review of the source, behaviour, and distribution of arsenic in natural waters. Appl Geochem 17:517-568
    • (2002) Appl Geochem , vol.17 , pp. 517-568
    • Smedley, P.L.1    Kinniburgh, D.G.2
  • 39
    • 0037434691 scopus 로고    scopus 로고
    • Covariance of bacterioplankton composition and environmental variables in a temperate delta system
    • Stepanauskas R, Moran MA, Bergamaschi BA, Hollibaugh JT (2003) Covariance of bacterioplankton composition and environmental variables in a temperate delta system. Aquat Microb Ecol 31:85-98
    • (2003) Aquat Microb Ecol , vol.31 , pp. 85-98
    • Stepanauskas, R.1    Moran, M.A.2    Bergamaschi, B.A.3    Hollibaugh, J.T.4
  • 40
    • 33748853295 scopus 로고    scopus 로고
    • Microbes pumping iron: Anaerobic microbial iron oxidation and reduction
    • Weber KA, Achenbach LA, Coates JD (2006) Microbes pumping iron: anaerobic microbial iron oxidation and reduction. Nature Rev Microbiol 4:752-764
    • (2006) Nature Rev Microbiol , vol.4 , pp. 752-764
    • Weber, K.A.1    Achenbach, L.A.2    Coates, J.D.3


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.