Comparison of two ESI-MS based H/D exchange methods for extracting protein folding energies

International Journal of Mass Spectrometry

Volumn 287, Issue 1-3, 2009, Pages 96-104

  Liyanage, Rohana ^a   Devarapalli, Nagarjuna ^a   Puckett, Latisha M ^a   Phan, N H ^a   Gidden, Jennifer ^a   Stites, Wesley E ^a   Lay Jr , Jackson O ^a  

^a UNIVERSITY OF ARKANSAS   (United States)

Author keywords

ESI; H D exchange; MALDI; Protein folding; SUPREX

Indexed keywords

EID: 70349742614     PISSN: 13873806     EISSN: None     Source Type: Journal    
DOI: 10.1016/j.ijms.2008.10.017     Document Type: Article

References (40)

1. Dobson C.M. Trends Biochem. Sci. 24 (1999) 329
2. Beijer F.H., Kooijman H., Spek A.L., Sijbesma R.P., and Angew E.W.M. Chem. Int. Ed. 37 (1998) 75
3. Chen J., and Stites W.E. Biochemistry 40 (2001) 14012
4. Maki K., Cheng H., Dolgikh D.A., and Roder H. J. Mol. Bio. 368 (2007) 244
5. Byrne M.P., and Stites W.E. Biophys. Chem. 125 (2007) 490
6. Chen J., and Stites W.E. Biochemistry 40 (2001) 14015
7. Schellman J.A. Biopolymers 17 (1978) 1305
8. Schellman J.A. Ann. Rev. Biophys. Chem. 16 (1987) 115
9. Maki K., Cheng H., Dolgikh D.A., Shastry M.C.R., and Roder H. J. Mol. Bio. 338 (2004) 383
10. Brandts J.F., and Lin L.N. Biochemistry 29 (1990) 6927
11. Hill J.J., and Royer C.A. Methods Enzymol. 278 (1997) 390
12. Sigurskjold B.W. Anal. Biochem. 277 (2000) 260
13. Straume M., and Freire E. Anal. Biochem. 203 (1992) 259
14. White A. Biochem. J. 71 (1959) 217
15. Chen E., Wood M.J., Fink A.L., and Kliger D.S. Biochemistry 37 (1998) 5589
16. Kim P.S., and Baldwin R.L. Annu. Rev. Biochem. 51 (1982) 459
17. Englander S.W., Sosnic T.R., Englander J.J., and Mayne L. Curr. Opin. Struct. Biol. 6 (1996) 18
18. Englander W. J. Am. Soc. Mass Spectrom. 17 (2006) 1481
19. Williams J.G., Tomer K.B., Hioe C.E., and Zolla-Pazner S. J. Am. Soc. Mass Spectrom. 17 (2006) 1560
20. Roulhac P.L., Powell K.D., Dhungana S., Weaver K.D., Mietzner T.A., Crumbliss A.L., and Fitzgerald M.C. Biochemistry 43 (2004) 15767
21. Williams J.C., Roulhac P.L., Roy A.G., Vallee R.B., Fitzgerald M.C., and Hendrickson W.A. Proc. Natl. Acad. Sci. U.S.A. 104 (2007) 10028
22. Tang L., Hopper E.D., Tong Y., Sadowsky J.D., Peterson K.J., Gellman S.H., and Fitzgerald M.C. Anal. Chem. 79 (2007) 5869
23. Xiao H., Kaltashov I.A., and Eyles S.J. J. Soc. Am. Mass Spectrom. 14 (2003) 506
24. Zhu M.M., Rempel D.L., Du Z., and Gross M.L. J. Am. Chem. Soc. 125 (2003) 5252
25. Ghaemmaghami S., Fitzgerald M.C., and Oas T.G. Proc. Natl. Acad. Sci. U.S.A. 97 (2000) 8296
26. Powell K.D., Ghaemmaghami S., Wang M.Z., Ma L., Oas T.G., and Fitzgerald M.C. J. Am. Chem. Soc. 124 (2002) 10256
27. Powell K.D., and Fitzgerald M.C. Biochemistry 42 (2003) 4962
28. Wani A.H., and Udgaonkar J.B. Biochemistry 45 (2006) 11226
29. Dai S.Y., and Fitzgerald M.C. J. Am. Soc. Mass Spectrom. 17 (2006) 1535
30. Chitta R.K., Rempel D.L., Grayson M.A., Remsen E.E., and Gross M.L. J. Am. Soc. Mass Spectrom. 17 (2006) 1526
31. Sperry J.B., Shi X., Rempel D.L., Nishimura Y., Akashi S., and Gross M.L. Biochemistry 47 (2008) 1797
32. Graham M.W., Liangjie T., and Fitzgerald M.C. Anal. Chem. 80 (2008) 4175
33. Weis D.D., Wales T.E., Engen J.R., Hotchko M., and Eyck L.F.T. J. Am. Soc. Mass Spectrom. 17 (2006) 1498
34. Bai Y., Miline J.S., and Englander S.W. Proteins 17 (1993) 75
35. Pace C.N., and Shaw K.L. Proteins Suppl. 4 (2000) 1
36. Chen J.M., Lu Z.Q., Sakon J., and Stites W.E. J. Mol. Bio. 303 (2000) 125
37. Went H.M., Benitez-Cardoza C.G., and Jackson S.E. FEBS Lett. 567 (2004) 333
38. Crespo M.D., Simpson E.R., and Searle M.S. J. Mol. Biol. 360 (2006) 1053
39. Sivaraman T., Arrington C.B., and Robertson A.D. Nat. Struct. Biol. 8 (2001) 331
40. Bédard S., Mayne L.C., Peterson R.W., Wand A.J., and Englander S.W. J. Mol. Biol. 376 (2008) 1142