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Volumn 28, Issue 3, 2009, Pages 155-165

Complete mitochondrial genome of brown marmorated stink bug Halyomorpha halys (Hemiptera: Pentatomidae), and phylogenetic relationships of hemipteran suborders

Author keywords

Gene rearrangement; Halyomorpha halys; Hemiptera; Mitochondrial genome; Phylogeny

Indexed keywords

ALANINE; THREONINE;

EID: 70349600750     PISSN: 10168478     EISSN: None     Source Type: Journal    
DOI: 10.1007/s10059-009-0125-9     Document Type: Article
Times cited : (48)

References (46)
  • 1
    • 0033555906 scopus 로고    scopus 로고
    • Tandem repeats finder: A program to analyze DNA sequences
    • Benson, G. (1999). Tandem repeats finder: A program to analyze DNA sequences. Nucleic Acids Res. 27, 573-580.
    • (1999) Nucleic Acids Res. , vol.27 , pp. 573-580
    • Benson, G.1
  • 2
    • 0033561361 scopus 로고    scopus 로고
    • Animal mitochondrial genomes
    • Boore, J.L. (1999) Animal mitochondrial genomes. Nucleic Acids Res. 27, 1767-1780.
    • (1999) Nucleic Acids Res. , vol.27 , pp. 1767-1780
    • Boore, J.L.1
  • 3
    • 0031769998 scopus 로고    scopus 로고
    • Big trees from little genomes: Mitochondrial gene order as a phylogenetic tool
    • Boore, J.L., and Brown, W.M. (1998). Big trees from little genomes: mitochondrial gene order as a phylogenetic tool. Curr. Opin. Genet. Dev. 8, 668-674.
    • (1998) Curr. Opin. Genet. Dev. , vol.8 , pp. 668-674
    • Boore, J.L.1    Brown, W.M.2
  • 4
    • 0028976102 scopus 로고
    • Deducing the pattern of arthropod phylogeny from mitochondrial DNA rearrangements
    • Boore, J.L., Collins, T.M., Stanton, D., Daehler, L.L., and Brown, W.M. (1995). Deducing the pattern of arthropod phylogeny from mitochondrial DNA rearrangements. Nature 376, 163-165.
    • (1995) Nature , vol.376 , pp. 163-165
    • Boore, J.L.1    Collins, T.M.2    Stanton, D.3    Daehler, L.L.4    Brown, W.M.5
  • 5
    • 19944400426 scopus 로고    scopus 로고
    • Sequencing and comparing whole mitochondrial genomes of animals
    • Boore, J.L., Macey, J.R., and Medina, M. (2005). Sequencing and comparing whole mitochondrial genomes of animals. Meth. Enzymol. 395, 311-348.
    • (2005) Meth. Enzymol. , vol.395 , pp. 311-348
    • Boore, J.L.1    Macey, J.R.2    Medina, M.3
  • 6
    • 0001343457 scopus 로고
    • Hemiptera (bugs, leafhoppers, cicadas, aphids, scale insects etc.)
    • In: CSIRO (ed) 2nd ed. (Carlton: Melbourne University Press)
    • Carver, M., Gross, G., and Woodward, T. (1991). Hemiptera (bugs, leafhoppers, cicadas, aphids, scale insects etc.). In: CSIRO (ed) The insects of Australia. A textbook for students and research workers, Vol. I, 2nd ed. (Carlton: Melbourne University Press), p. 429.
    • (1991) The Insects of Australia. A Textbook for Students and Research Workers , vol.1 , pp. 429
    • Carver, M.1    Gross, G.2    Woodward, T.3
  • 7
    • 0034043778 scopus 로고    scopus 로고
    • Selection of conserved blocks from multiple alignments for their use in phylogenetic analysis
    • Castresana, J. (2000). Selection of conserved blocks from multiple alignments for their use in phylogenetic analysis. Mol. Biol. Evol. 17, 540-552.
    • (2000) Mol. Biol. Evol. , vol.17 , pp. 540-552
    • Castresana, J.1
  • 8
    • 70349590707 scopus 로고
    • Evolutionary trends in Heteroptera. Part II. Mouthpart-structures and feeding strategies (The Netherlands, Wageningen: Mededelingen Landbouwhogeschool)
    • Cobben, R.H. (1978). Evolutionary trends in Heteroptera. Part II. Mouthpart-structures and feeding strategies (The Netherlands, Wageningen: Mededelingen Landbouwhogeschool).
    • (1978)
    • Cobben, R.H.1
  • 9
    • 0034962223 scopus 로고    scopus 로고
    • Sequence and organization of the mitochondrial genome of the Chagas disease vector, Triatoma dimidiata
    • Dotson, E.M., and Beard, C.B. (2001). Sequence and organization of the mitochondrial genome of the Chagas disease vector, Triatoma dimidiata. Insect Mol. Biol. 11, 205-215.
    • (2001) Insect Mol. Biol. , vol.11 , pp. 205-215
    • Dotson, E.M.1    Beard, C.B.2
  • 10
    • 0033088439 scopus 로고    scopus 로고
    • Relationships among the cyclostome braconid (Hymenoptera: Braconidae) subfamilies inferred from a mitochondrial tRNA gene rearrangement
    • Dowton, M. (1999). Relationships among the cyclostome braconid (Hymenoptera: Braconidae) subfamilies inferred from a mitochondrial tRNA gene rearrangement. Mol. Phylogenet. Evol. 11, 283-287.
    • (1999) Mol. Phylogenet. Evol. , vol.11 , pp. 283-287
    • Dowton, M.1
  • 11
    • 0000461280 scopus 로고
    • Confidence limits on phylogenies: An approach using the bootstrap
    • Felsenstein, J. (1985). Confidence limits on phylogenies: An approach using the bootstrap. Evolution 39, 783-791
    • (1985) Evolution , vol.39 , pp. 783-791
    • Felsenstein, J.1
  • 12
    • 0028528103 scopus 로고
    • DNA primers for amplification of mitochondrial cytochrome c oxydase subunit I from diverse metazoan invertebrates
    • Folmer, O., Black, M., Lutz, R., and Vrijenhoek, R. (1994). DNA primers for amplification of mitochondrial cytochrome c oxydase subunit I from diverse metazoan invertebrates. Mol. Marine Biol. Biotechnol. 3, 294-299.
    • (1994) Mol. Marine Biol. Biotechnol. , vol.3 , pp. 294-299
    • Folmer, O.1    Black, M.2    Lutz, R.3    Vrijenhoek, R.4
  • 13
    • 0002215832 scopus 로고
    • Evolution of the alimentary canal in the Hemiptera
    • Goodchild, A. (1966). Evolution of the alimentary canal in the Hemiptera. Biol. Rev. 41, 97-140.
    • (1966) Biol. Rev. , vol.41 , pp. 97-140
    • Goodchild, A.1
  • 14
    • 0000255431 scopus 로고
    • Morphology and evolution of the rhynchotan head (Insecta: Hemiptera, Homoptera)
    • Hamilton, K. (1981). Morphology and evolution of the rhynchotan head (Insecta: Hemiptera, Homoptera). Can. Entomol. 113, 953-974.
    • (1981) Can. Entomol. , vol.113 , pp. 953-974
    • Hamilton, K.1
  • 15
    • 0003639470 scopus 로고
    • (New York: J Wiley and Sons)
    • Hennig, W. (1981). Insect phylogeny (New York: J Wiley and Sons)
    • (1981) Insect Phylogeny
    • Hennig, W.1
  • 16
    • 0038364202 scopus 로고    scopus 로고
    • Halyomorpha halys (Heteroptera: Pentatomidae): A polyphagous plant pest from Asia newly detected in North America
    • Hoebeke, E.R., and Carter, M.E. (2003). Halyomorpha halys (Heteroptera: Pentatomidae): A polyphagous plant pest from Asia newly detected in North America. Proc. Entomol. Soc. Wash. 105, 225-237.
    • (2003) Proc. Entomol. Soc. Wash. , vol.105 , pp. 225-237
    • Hoebeke, E.R.1    Carter, M.E.2
  • 17
    • 61949163617 scopus 로고    scopus 로고
    • Comparative and phylogenomic studies on the mitochondrial genomes of Pentatomomorpha (Insecta: Hemiptera: Heteroptera)
    • Hua, J., Li, M., Dong, P., Cui, Y., Xie, Q., and Bu, W. (2008). Comparative and phylogenomic studies on the mitochondrial genomes of Pentatomomorpha (Insecta: Hemiptera: Heteroptera). BMC Genomics 9, 610.
    • (2008) BMC Genomics , vol.9 , pp. 610
    • Hua, J.1    Li, M.2    Dong, P.3    Cui, Y.4    Xie, Q.5    Bu, W.6
  • 18
    • 0034849408 scopus 로고    scopus 로고
    • MRBAYES: Bayesian inference of phylogenetic trees
    • Huelsenbeck, J.P., and Ronquist, F. (2001). MRBAYES: Bayesian inference of phylogenetic trees. Bioinformatics 17, 754-755.
    • (2001) Bioinformatics , vol.17 , pp. 754-755
    • Huelsenbeck, J.P.1    Ronquist, F.2
  • 19
    • 0028223964 scopus 로고
    • The cytochrome b region in the mitochondrial DNA of the ant Tetraponera rufoniger: Sequence divergence in Hymenoptera may be associated with nucleotide content
    • Jermiin, L.S., and Crozier, R.H. (1994). The cytochrome b region in the mitochondrial DNA of the ant Tetraponera rufoniger: Sequence divergence in Hymenoptera may be associated with nucleotide content. J. Mol. Evol. 38, 282-294.
    • (1994) J. Mol. Evol. , vol.38 , pp. 282-294
    • Jermiin, L.S.1    Crozier, R.H.2
  • 20
    • 0029411102 scopus 로고
    • PCR primers for the amplification of four insect mitochondrial gene fragments
    • Kambhampati, S., and Smith, P.T. (1995). PCR primers for the amplification of four insect mitochondrial gene fragments. Insect Mol. Biol. 4, 233-236.
    • (1995) Insect Mol. Biol. , vol.4 , pp. 233-236
    • Kambhampati, S.1    Smith, P.T.2
  • 21
    • 65149102046 scopus 로고    scopus 로고
    • Complete mitochondrial genome sequence of the yellow-spotted long-horned beetle Psacothea hilaris (Coleoptera: Cerambycidae) and phylogenetic analysis among coleopteran insects
    • Kim, K.-G., Hong, M.Y., Kim, M.J., Im, H.H., Kim, M.I., Bae, C.H., Seo, S.J., Lee, S.H., and Kim, I. (2009). Complete mitochondrial genome sequence of the yellow-spotted long-horned beetle Psacothea hilaris (Coleoptera: Cerambycidae) and phylogenetic analysis among coleopteran insects. Mol. Cells 27, 429-441.
    • (2009) Mol. Cells , vol.27 , pp. 429-441
    • Kim, K.-G.1    Hong, M.Y.2    Kim, M.J.3    Im, H.H.4    Kim, M.I.5    Bae, C.H.6    Seo, S.J.7    Lee, S.H.8    Kim, I.9
  • 22
    • 70349584520 scopus 로고
    • The phylogeny of hexapod "orders." A critical review of recent accounts
    • Kristensen, N. (1973). The phylogeny of hexapod "orders." A critical review of recent accounts. J. Zool. Syst. Evol. Res. 26, 1-44.
    • (1973) J. Zool. Syst. Evol. Res. , vol.26 , pp. 1-44
    • Kristensen, N.1
  • 23
    • 0001508326 scopus 로고
    • Phylogeny of insect orders
    • Kristensen, N. (1981). Phylogeny of insect orders. Annu. Rev. Entomol. 26, 135-157.
    • (1981) Annu. Rev. Entomol. , vol.26 , pp. 135-157
    • Kristensen, N.1
  • 25
    • 0000404433 scopus 로고
    • Fossil history and the evolution of hexapod structures
    • In: CSIRO (ed) 2nd ed. (Carlton: Melbourne University Press)
    • Kukalová-Peck, J. (1991). Fossil history and the evolution of hexapod structures. In: CSIRO (ed) The insects of Australia. A textbook for students and research workers, Vol. I, 2nd ed. (Carlton: Melbourne University Press), p. 141.
    • (1991) The Insects of Australia. A Textbook for Students and Research Workers , vol.1 , pp. 141
    • Kukalová-Peck, J.1
  • 26
    • 65649090614 scopus 로고    scopus 로고
    • IMGD: An integrated platform supporting comparative genomics and phylogenetics of insect mitochondrial genomes
    • Lee, W., Park, J., Choi, J., Jung, K., Park, B., Kim, D., Lee, J., Ahn, K., Song, W., Kang, S., et al. (2009). IMGD: An integrated platform supporting comparative genomics and phylogenetics of insect mitochondrial genomes. BMC Genomics 10, 148.
    • (2009) BMC Genomics , vol.10 , pp. 148
    • Lee, W.1    Park, J.2    Choi, J.3    Jung, K.4    Park, B.5    Kim, D.6    Lee, J.7    Ahn, K.8    Song, W.9    Kang, S.10
  • 28
    • 0030854739 scopus 로고    scopus 로고
    • tRNAscan-SE: A program for improved detection of transfer RNA genes in genomic sequence
    • Lowe, T.M., and Eddy, S.R. (1997). tRNAscan-SE: A program for improved detection of transfer RNA genes in genomic sequence. Nucleic Acids Res. 25, 955-964.
    • (1997) Nucleic Acids Res. , vol.25 , pp. 955-964
    • Lowe, T.M.1    Eddy, S.R.2
  • 29
    • 5044238332 scopus 로고    scopus 로고
    • Phylogenetic analysis of water striders (Hemiptera:Gerroidea) based on partial sequences of mitochondrial and nuclear ribosomal RNA genes
    • Muraji, M., and Tachikawa, S. (2000). Phylogenetic analysis of water striders (Hemiptera:GErroidea) based on partial sequences of mitochondrial and nuclear ribosomal RNA genes. Entomol. Sci. 3, 615-626.
    • (2000) Entomol. Sci. , vol.3 , pp. 615-626
    • Muraji, M.1    Tachikawa, S.2
  • 30
    • 0034345742 scopus 로고    scopus 로고
    • Phylogenetic utility of nucleotide sequences of mitochondrial 16S ribosomal RNA and cytochrome b genes in anthocorid bugs (Heteroptera: Anthocoridae)
    • Muraji, M., Kawasaki, K., and Shimizu, T. (2000). Phylogenetic utility of nucleotide sequences of mitochondrial 16S ribosomal RNA and cytochrome b genes in anthocorid bugs (Heteroptera: Anthocoridae). Appl. Entomol. Zool. (Jpn.) 35, 293-300.
    • (2000) Appl. Entomol. Zool. (Jpn.) , vol.35 , pp. 293-300
    • Muraji, M.1    Kawasaki, K.2    Shimizu, T.3
  • 32
    • 70349594742 scopus 로고
    • Super-ordre des Hémiptéroïdes (Hemiptera Linné, 1758, Rhynchota Burrueister, 1835)
    • In: Grassé P-P (ed) Tome X. Insectes superieurs, et Hémiptéroïdes.2 vols (Masson, Paris) pp. 1-975
    • Poisson, R., and Pesson, P. (1951). Super-ordre des Hémiptéroïdes (Hemiptera Linné, 1758, Rhynchota Burrueister, 1835), In: Grassé P-P (ed) Traité de Zoologic: Anatomic, Systématique, Biologic. Tome X. Insectes superieurs, et Hémiptéroïdes.2 vols (Masson, Paris), pp. 1-975, 976-1948
    • (1951) Traité De Zoologic: Anatomic, Systématique, Biologic , pp. 976-1948
    • Poisson, R.1    Pesson, P.2
  • 33
    • 0031773680 scopus 로고    scopus 로고
    • MODELTEST: Testing the model of DNA substitution
    • Posada, D., and Crandall, K.A. (1998). MODELTEST: Testing the model of DNA substitution. Bioinformatics 14, 817-818.
    • (1998) Bioinformatics , vol.14 , pp. 817-818
    • Posada, D.1    Crandall, K.A.2
  • 34
    • 0034901457 scopus 로고    scopus 로고
    • A major mitochondrial gene rearrangement among closely related species
    • Rawlings, T.A., Collins, T.M., and Bieler, R. (2001). A major mitochondrial gene rearrangement among closely related species. Mol. Biol. Evol. 18, 1604-1609.
    • (2001) Mol. Biol. Evol. , vol.18 , pp. 1604-1609
    • Rawlings, T.A.1    Collins, T.M.2    Bieler, R.3
  • 35
    • 0033793019 scopus 로고    scopus 로고
    • Rare genomic changes as a tool for phylogenetics
    • Rokas, A., and Holland, P.W. (2000). Rare genomic changes as a tool for phylogenetics. Trends Ecol. Evol. 18, 454-459.
    • (2000) Trends Ecol. Evol. , vol.18 , pp. 454-459
    • Rokas, A.1    Holland, P.W.2
  • 38
    • 70349605756 scopus 로고
    • Recent advances in the higher systematics and phylogenetic concepts in entomology
    • Scudder, G. (1973). Recent advances in the higher systematics and phylogenetic concepts in entomology. Can. Entomol. 105, 1251-1263.
    • (1973) Can. Entomol. , vol.105 , pp. 1251-1263
    • Scudder, G.1
  • 39
    • 0037359951 scopus 로고    scopus 로고
    • The highly rearranged mitochondrial genome of the plague thrips, Thrips imaginis (Insecta: Thysanoptera): Convergence of two novel gene boundaries and an extraordinary arrangement of rRNA genes
    • Shao, R., and Barker, S.C. (2003). The highly rearranged mitochondrial genome of the plague thrips, Thrips imaginis (Insecta: Thysanoptera): convergence of two novel gene boundaries and an extraordinary arrangement of rRNA genes. Mol. Biol. Evol. 20, 362-370.
    • (2003) Mol. Biol. Evol. , vol.20 , pp. 362-370
    • Shao, R.1    Barker, S.C.2
  • 40
    • 19944386942 scopus 로고    scopus 로고
    • Insect mitochondrial genomics: The complete mitochondrial genome sequence of the meadow spittlebug Philaenus spumarius (Hemiptera: Auchenorrhyncha: Cercopoidae)
    • Stewart, J.B., and Beckenbach, A.T. (2005). Insect mitochondrial genomics: The complete mitochondrial genome sequence of the meadow spittlebug Philaenus spumarius (Hemiptera: Auchenorrhyncha: Cercopoidae). Genome 48, 46-54.
    • (2005) Genome , vol.48 , pp. 46-54
    • Stewart, J.B.1    Beckenbach, A.T.2
  • 42
    • 3643098083 scopus 로고
    • Autapomorphous wing characters in the recent subgroups of Sternorrhyncha (Hemiptera) and their significance in the interpretation of the Paleozoic members of the group
    • Szelegiewicz, H. (1971). Autapomorphous wing characters in the recent subgroups of Sternorrhyncha (Hemiptera) and their significance in the interpretation of the Paleozoic members of the group. Ann. Zool. Fenn. 29, 1-67.
    • (1971) Ann. Zool. Fenn. , vol.29 , pp. 1-67
    • Szelegiewicz, H.1
  • 43
    • 5444246169 scopus 로고    scopus 로고
    • Organization of the mitochondrial genomes of whiteflies, aphids, and psyllids (Hemiptera, Sternorrhyncha)
    • Thao, M.L., Baumann, L., and Baumann, P. (2004). Organization of the mitochondrial genomes of whiteflies, aphids, and psyllids (Hemiptera, Sternorrhyncha). BMC Evol. Biol. 4, 25.
    • (2004) BMC Evol. Biol. , vol.4 , pp. 25
    • Thao, M.L.1    Baumann, L.2    Baumann, P.3
  • 44
    • 0031574072 scopus 로고    scopus 로고
    • The CLUSTAL_X windows interface: Flexible strategies for multiple sequence alignment aided by quality analysis tools
    • Thompson, J.D., Gibson, T.J., Plewniak, F., Jeanmougin, F., and Higgins, D.G. (1997). The CLUSTAL_X windows interface: Flexible strategies for multiple sequence alignment aided by quality analysis tools. Nucleic Acids Res. 25, 4876-4882.
    • (1997) Nucleic Acids Res. , vol.25 , pp. 4876-4882
    • Thompson, J.D.1    Gibson, T.J.2    Plewniak, F.3    Jeanmougin, F.4    Higgins, D.G.5
  • 45
    • 0029023378 scopus 로고
    • Molecular phylogeny of the Homoptera: A paraphyletic taxon
    • von Dohlen, C.D., and Moran, N.A. (1995). Molecular phylogeny of the Homoptera: A paraphyletic taxon. J. Mol. Evol. 41, 211-223.
    • (1995) J. Mol. Evol. , vol.41 , pp. 211-223
    • von Dohlen, C.D.1    Moran, N.A.2
  • 46
    • 84981627378 scopus 로고
    • Homology and function in the wings of Heteroptera
    • Wootton, R.J., and Betts, C.R. (1986). Homology and function in the wings of Heteroptera. Syst. Entomol. 11, 389-400.
    • (1986) Syst. Entomol. , vol.11 , pp. 389-400
    • Wootton, R.J.1    Betts, C.R.2


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