-
1
-
-
46449106628
-
The mode of antifungal action of plant, insect and human defensins
-
Aerts A.M., François I.E., Cammue B.P., and Thevissen K. The mode of antifungal action of plant, insect and human defensins. Cell Mol Life Sci 65 (2008) 2069-2079
-
(2008)
Cell Mol Life Sci
, vol.65
, pp. 2069-2079
-
-
Aerts, A.M.1
François, I.E.2
Cammue, B.P.3
Thevissen, K.4
-
2
-
-
13844308074
-
Defensins-non-antibiotic use for vaccine development
-
Biragyn A. Defensins-non-antibiotic use for vaccine development. Curr Protein Pept Sci 6 (2005) 53-60
-
(2005)
Curr Protein Pept Sci
, vol.6
, pp. 53-60
-
-
Biragyn, A.1
-
3
-
-
33947397227
-
Computational promoter analysis of mouse, rat and human antimicrobial peptide-coding genes
-
Brahmachary M., Schönbach C., Yang L., Huang E., Tan S.L., Chowdhary R., et al. Computational promoter analysis of mouse, rat and human antimicrobial peptide-coding genes. BMC Bioinform 7 (2006) S8
-
(2006)
BMC Bioinform
, vol.7
-
-
Brahmachary, M.1
Schönbach, C.2
Yang, L.3
Huang, E.4
Tan, S.L.5
Chowdhary, R.6
-
4
-
-
29244482784
-
Predicting membrane protein type by functional domain composition and pseudo amino acid composition
-
Cai Y.D., and Chou K.C. Predicting membrane protein type by functional domain composition and pseudo amino acid composition. J Theor Biol 238 (2006) 395-400
-
(2006)
J Theor Biol
, vol.238
, pp. 395-400
-
-
Cai, Y.D.1
Chou, K.C.2
-
5
-
-
0036154920
-
Support vector machines for predicting the specificity of GalNAc-transferase
-
Cai Y.D., Liu X.J., Xu X.B., and Chou K.C. Support vector machines for predicting the specificity of GalNAc-transferase. Peptides 23 (2002) 205-208
-
(2002)
Peptides
, vol.23
, pp. 205-208
-
-
Cai, Y.D.1
Liu, X.J.2
Xu, X.B.3
Chou, K.C.4
-
6
-
-
33947390931
-
Prediction of the subcellular location of apoptosis proteins
-
Chen Y.L., and Li Q.Z. Prediction of the subcellular location of apoptosis proteins. J Theor Biol 245 (2007) 775-783
-
(2007)
J Theor Biol
, vol.245
, pp. 775-783
-
-
Chen, Y.L.1
Li, Q.Z.2
-
7
-
-
34249318001
-
Euk-mPLoc: a fusion classifier for largescale eukaryotic protein subcellular location prediction by incorporating multiple sites
-
Chou K.C., and Shen H.B. Euk-mPLoc: a fusion classifier for largescale eukaryotic protein subcellular location prediction by incorporating multiple sites. J Proteome Res 6 (2007) 1728-1734
-
(2007)
J Proteome Res
, vol.6
, pp. 1728-1734
-
-
Chou, K.C.1
Shen, H.B.2
-
8
-
-
33845423991
-
Large-scale predictions of Gramnegative bacterial protein subcellular locations
-
Chou K.C., and Shen H.B. Large-scale predictions of Gramnegative bacterial protein subcellular locations. J Proteome Res 5 (2006) 3420-3428
-
(2006)
J Proteome Res
, vol.5
, pp. 3420-3428
-
-
Chou, K.C.1
Shen, H.B.2
-
9
-
-
34548606295
-
Review: recent progresses in protein subcellular location prediction
-
Chou K.C., and Shen H.B. Review: recent progresses in protein subcellular location prediction. Anal Biochem 370 (2007) 1-16
-
(2007)
Anal Biochem
, vol.370
, pp. 1-16
-
-
Chou, K.C.1
Shen, H.B.2
-
10
-
-
0029051959
-
A novel approach to predicting protein structural classes in a (20-1)-d amino acid composition space
-
Chou K.C. A novel approach to predicting protein structural classes in a (20-1)-d amino acid composition space. Proteins Struct Funct Genet 21 (1995) 319-344
-
(1995)
Proteins Struct Funct Genet
, vol.21
, pp. 319-344
-
-
Chou, K.C.1
-
11
-
-
12744279642
-
Using amphiphilic pseudo amino acid composition to predict enzyme subfamily classes
-
Chou K.C. Using amphiphilic pseudo amino acid composition to predict enzyme subfamily classes. Bioinformatics 21 (2005) 10-19
-
(2005)
Bioinformatics
, vol.21
, pp. 10-19
-
-
Chou, K.C.1
-
12
-
-
23144437382
-
New assessment of a structural alphabet
-
de Brevern A.G. New assessment of a structural alphabet. In Silico Biol 5 (2005) 283-289
-
(2005)
In Silico Biol
, vol.5
, pp. 283-289
-
-
de Brevern, A.G.1
-
13
-
-
35748976251
-
A reduced amino acid alphabet for understanding and designing protein adaptation to mutation
-
Etchebest C., Benros C., Bornot A., Camproux A.C., and de Brevern A.G. A reduced amino acid alphabet for understanding and designing protein adaptation to mutation. Eur Biophys J 36 (2007) 1059-1069
-
(2007)
Eur Biophys J
, vol.36
, pp. 1059-1069
-
-
Etchebest, C.1
Benros, C.2
Bornot, A.3
Camproux, A.C.4
de Brevern, A.G.5
-
14
-
-
0141799911
-
Defensins: antimicrobial peptides of innate immunity
-
Ganz T. Defensins: antimicrobial peptides of innate immunity. Nat Rev Immunol 3 (2003) 710-720
-
(2003)
Nat Rev Immunol
, vol.3
, pp. 710-720
-
-
Ganz, T.1
-
15
-
-
3242778563
-
Defensins: antimicrobial peptides of vertebrates
-
Ganz T. Defensins: antimicrobial peptides of vertebrates. Comptes Rendus Biol 327 (2004) 539-549
-
(2004)
Comptes Rendus Biol
, vol.327
, pp. 539-549
-
-
Ganz, T.1
-
16
-
-
23444437935
-
A review of antimicrobial peptides and their therapeutic potential as anti-infective drugs
-
Gordon Y.J., Romanowski E.G., and McDermott A.M. A review of antimicrobial peptides and their therapeutic potential as anti-infective drugs. Curr Eye Res 30 (2005) 505-515
-
(2005)
Curr Eye Res
, vol.30
, pp. 505-515
-
-
Gordon, Y.J.1
Romanowski, E.G.2
McDermott, A.M.3
-
17
-
-
33845699790
-
Antimicrobial and hostdefense peptides as new anti-infective therapeutic strategies
-
Hancock R.E., and Sahl H.G. Antimicrobial and hostdefense peptides as new anti-infective therapeutic strategies. Nat Biotechnol 24 (2006) 1551-1557
-
(2006)
Nat Biotechnol
, vol.24
, pp. 1551-1557
-
-
Hancock, R.E.1
Sahl, H.G.2
-
18
-
-
33846432358
-
Antimicrobial peptides as new recognition molecules for screening challenging species
-
Kulagina N.V., Shaffer K.M., Ligler F.S., and Taitt C.R. Antimicrobial peptides as new recognition molecules for screening challenging species. Sens Actuators B 121 (2007) 150-157
-
(2007)
Sens Actuators B
, vol.121
, pp. 150-157
-
-
Kulagina, N.V.1
Shaffer, K.M.2
Ligler, F.S.3
Taitt, C.R.4
-
19
-
-
35448929949
-
Analysis and prediction of antibacterial peptides
-
Lata S., Sharma B.K., and Raghava G.P. Analysis and prediction of antibacterial peptides. BMC Bioinform 23 (2007) 263
-
(2007)
BMC Bioinform
, vol.23
, pp. 263
-
-
Lata, S.1
Sharma, B.K.2
Raghava, G.P.3
-
20
-
-
0018262333
-
The measure of diversity
-
Laxton R.R. The measure of diversity. J Theor Biol 71 (1978) 51-56
-
(1978)
J Theor Biol
, vol.71
, pp. 51-56
-
-
Laxton, R.R.1
-
21
-
-
34447131677
-
Grouping of amino acids and recognition of protein structurally conserved regions by reduced alphabets of amino acids
-
Li J., and Wang W. Grouping of amino acids and recognition of protein structurally conserved regions by reduced alphabets of amino acids. Sci China C Life Sci 50 (2007) 392-402
-
(2007)
Sci China C Life Sci
, vol.50
, pp. 392-402
-
-
Li, J.1
Wang, W.2
-
22
-
-
0035824718
-
The prediction of the structural class of protein: application of the measure of diversity
-
Li Q.Z., and Lu Z.Q. The prediction of the structural class of protein: application of the measure of diversity. J Theor Biol 21 (2001) 493-502
-
(2001)
J Theor Biol
, vol.21
, pp. 493-502
-
-
Li, Q.Z.1
Lu, Z.Q.2
-
23
-
-
33745634395
-
Cd-hit: a fast program for clustering and comparing large sets of protein or nucleotide sequences
-
Li W.Z., and Godzik A. Cd-hit: a fast program for clustering and comparing large sets of protein or nucleotide sequences. Bioinformatics 22 (2006) 1658-1659
-
(2006)
Bioinformatics
, vol.22
, pp. 1658-1659
-
-
Li, W.Z.1
Godzik, A.2
-
24
-
-
49449087313
-
Predicting subcellular localization of mycobacterial proteins by using Chou's pseudo amino acid composition
-
Lin H., Ding H., Guo F.B., Zhang A.Y., and Huang J. Predicting subcellular localization of mycobacterial proteins by using Chou's pseudo amino acid composition. Protein Peptide Lett 15 (2008) 739-744
-
(2008)
Protein Peptide Lett
, vol.15
, pp. 739-744
-
-
Lin, H.1
Ding, H.2
Guo, F.B.3
Zhang, A.Y.4
Huang, J.5
-
25
-
-
33846524311
-
Predicting conotoxin superfamily and family by using pseudo amino acid composition and modified Mahalanobis discriminant
-
Lin H., and Li Q.Z. Predicting conotoxin superfamily and family by using pseudo amino acid composition and modified Mahalanobis discriminant. Biochem Biophys Res Commun 354 (2007) 548-551
-
(2007)
Biochem Biophys Res Commun
, vol.354
, pp. 548-551
-
-
Lin, H.1
Li, Q.Z.2
-
26
-
-
42749090472
-
The modified Mahalanobis discriminant for predicting outer membrane proteins by using Chou's pseudo amino acid composition
-
Lin H. The modified Mahalanobis discriminant for predicting outer membrane proteins by using Chou's pseudo amino acid composition. J Theor Biol 252 (2008) 350-356
-
(2008)
J Theor Biol
, vol.252
, pp. 350-356
-
-
Lin, H.1
-
27
-
-
33750304297
-
Linguistic model for the rational design of antimicrobial peptides
-
Loose C., Jensen K., Rigoutsos I., and Stephanopoulos G. Linguistic model for the rational design of antimicrobial peptides. Nature 443 (2006) 867-869
-
(2006)
Nature
, vol.443
, pp. 867-869
-
-
Loose, C.1
Jensen, K.2
Rigoutsos, I.3
Stephanopoulos, G.4
-
28
-
-
58149512313
-
GalNAc-transferase specificity prediction based on feature selection method
-
Lu L., Niu B., Zhao J., Liu L., Lu W.C., Liu X.J., et al. GalNAc-transferase specificity prediction based on feature selection method. Peptides 30 (2009) 359-364
-
(2009)
Peptides
, vol.30
, pp. 359-364
-
-
Lu, L.1
Niu, B.2
Zhao, J.3
Liu, L.4
Lu, W.C.5
Liu, X.J.6
-
29
-
-
40549084359
-
In silico local structure approach: a case study on outer membrane proteins
-
Martin J., de Brevern A.G., and Camproux A.C. In silico local structure approach: a case study on outer membrane proteins. Proteins 71 (2008) 92-109
-
(2008)
Proteins
, vol.71
, pp. 92-109
-
-
Martin, J.1
de Brevern, A.G.2
Camproux, A.C.3
-
30
-
-
39549116279
-
A genetic approach for building different alphabets for peptide and protein classification
-
Nanni L., and Lumini A. A genetic approach for building different alphabets for peptide and protein classification. BMC Bioinform 9 (2008) 45
-
(2008)
BMC Bioinform
, vol.9
, pp. 45
-
-
Nanni, L.1
Lumini, A.2
-
31
-
-
33846108632
-
Defensins knowledgebase: a manually curated database and information source focused on the defensins family of antimicrobial peptides
-
Seebah S., Suresh A., Zhuo S., Choong Y.H., Chua H., Chuon D., et al. Defensins knowledgebase: a manually curated database and information source focused on the defensins family of antimicrobial peptides. Nucleic Acids Res 35 (2007) D265-D268
-
(2007)
Nucleic Acids Res
, vol.35
-
-
Seebah, S.1
Suresh, A.2
Zhuo, S.3
Choong, Y.H.4
Chua, H.5
Chuon, D.6
-
32
-
-
33747880465
-
Ensemble classifier for protein fold pattern recognition
-
Shen H.B., and Chou K.C. Ensemble classifier for protein fold pattern recognition. Bioinformatics 22 (2006) 1717-1722
-
(2006)
Bioinformatics
, vol.22
, pp. 1717-1722
-
-
Shen, H.B.1
Chou, K.C.2
-
33
-
-
35348973511
-
EzyPred: a top-down approach for predicting enzyme functional classes and subclasses
-
Shen H.B., and Chou K.C. EzyPred: a top-down approach for predicting enzyme functional classes and subclasses. Biochem Biophys Res Commun 364 (2007) 53-59
-
(2007)
Biochem Biophys Res Commun
, vol.364
, pp. 53-59
-
-
Shen, H.B.1
Chou, K.C.2
-
34
-
-
33947383052
-
Modelling study of dimerization in mammalian defensins
-
Suresh A., and Verma C. Modelling study of dimerization in mammalian defensins. BMC Bioinform 7 (2006) S17
-
(2006)
BMC Bioinform
, vol.7
-
-
Suresh, A.1
Verma, C.2
-
36
-
-
33747831751
-
Protein Block Expert (PBE): a web-based protein structure analysis server using a structural alphabet
-
Tyagi M., Sharma P., Swamy C.S., Cadet F., Srinivasan N., de Brevern A.G., et al. Protein Block Expert (PBE): a web-based protein structure analysis server using a structural alphabet. Nucleic Acids Res 34 (2006) W119-W123
-
(2006)
Nucleic Acids Res
, vol.34
-
-
Tyagi, M.1
Sharma, P.2
Swamy, C.S.3
Cadet, F.4
Srinivasan, N.5
de Brevern, A.G.6
-
37
-
-
58149187882
-
APD2: the updated antimicrobial peptide database and its application in peptide design
-
Wang G., Li X., and Wang Z. APD2: the updated antimicrobial peptide database and its application in peptide design. Nucleic Acids Res 37 (2009) D933-D937
-
(2009)
Nucleic Acids Res
, vol.37
-
-
Wang, G.1
Li, X.2
Wang, Z.3
-
38
-
-
0037165196
-
Antimicrobial peptides of multicellular organisms
-
Zasloff M. Antimicrobial peptides of multicellular organisms. Nature 415 (2002) 389-395
-
(2002)
Nature
, vol.415
, pp. 389-395
-
-
Zasloff, M.1
-
39
-
-
33750528233
-
A novel method for apoptosis protein subcellular localization prediction combining encoding based on grouped weight and support vector machine
-
Zhang Z.H., Wang Z.H., Zhang Z.R., and Wang Y.X. A novel method for apoptosis protein subcellular localization prediction combining encoding based on grouped weight and support vector machine. FEBS Lett 580 (2006) 6169-6174
-
(2006)
FEBS Lett
, vol.580
, pp. 6169-6174
-
-
Zhang, Z.H.1
Wang, Z.H.2
Zhang, Z.R.3
Wang, Y.X.4
|