Protein structure mining using a structural alphabet

Proteins: Structure, Function and Genetics

Volumn 71, Issue 2, 2008, Pages 920-937

  Tyagi, M ^a,d   De Brevern, A G ^b   Srinivasan, N ^a,c   Offmann, B ^a  

^a UNIVERSITÉ DE LA RÉUNION   (France)

^b INSERM   (France)

^c INDIAN INSTITUTE OF SCIENCE   (India)

^d NATIONAL INSTITUTES OF HEALTH   (United States)

Author keywords

Global alignment; Local alignment; Local protein structure; Protein blocks; Structure comparison; Structure mining; Substitution matrix

Indexed keywords

ABC TRANSPORTER; BACTERIAL PROTEIN; RIBOSOME PROTEIN;

ALGORITHM; AMINO ACID SEQUENCE; ARTICLE; COMPARATIVE STUDY; PRIORITY JOURNAL; PROTEIN DOMAIN; PROTEIN FAMILY; PROTEIN MOTIF; PROTEIN SECONDARY STRUCTURE; PROTEIN STRUCTURE; REFERENCE DATABASE; SEQUENCE ANALYSIS; STRUCTURE ANALYSIS;

ALGORITHMS; AMINO ACID MOTIFS; AMINO ACID SEQUENCE; DATABASES, PROTEIN; MODELS, MOLECULAR; PROTEIN FOLDING; PROTEINS; SENSITIVITY AND SPECIFICITY; SEQUENCE ALIGNMENT; SEQUENCE ANALYSIS, PROTEIN; SOFTWARE; SRC HOMOLOGY DOMAINS;

EID: 41149118582     PISSN: 08873585     EISSN: 10970134     Source Type: Journal    
DOI: 10.1002/prot.21776     Document Type: Article

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