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Volumn 9, Issue 18, 2009, Pages 4298-4308

Quantitative DY-maleimide-based proteomic 2-DE-labeling strategies using human skin proteins

Author keywords

2 DE singular DY maleimide dye protein labeling; Differential protein expression; DIGE; Fluorescent dyes; Keratinocyte; Technology

Indexed keywords

DY 505 MALEIMIDE DYE; DY 555 MALEIMIDE DYE; DY 635 MALEIMIDE DYE; DYE; UNCLASSIFIED DRUG;

EID: 70349123767     PISSN: 16159853     EISSN: 16159861     Source Type: Journal    
DOI: 10.1002/pmic.200900051     Document Type: Article
Times cited : (17)

References (40)
  • 1
    • 0016637146 scopus 로고
    • Protein mapping by combined isoelectric focusing and electrophoresis of mouse tissues. a novel approach to testing for induced point mutations in mammals
    • Klose, J., Protein mapping by combined isoelectric focusing and electrophoresis of mouse tissues. A novel approach to testing for induced point mutations in mammals. Human-genetik 1975, 26, 231-243.
    • (1975) Human-genetik , vol.26 , pp. 231-243
    • Klose, J.1
  • 2
    • 0016711037 scopus 로고
    • High-resolution two-dimensional electrophoresis of proteins
    • O'Farrell, P. H., High-resolution two-dimensional electrophoresis of proteins. J. Biol. Chem. 1975, 250, 4007-4021.
    • (1975) J. Biol. Chem. , vol.250 , pp. 4007-4021
    • O'Farrell, P.H.1
  • 3
    • 0034095972 scopus 로고    scopus 로고
    • The current state of two-dimensional electrophoresis with immobilized pH gradients
    • DOI 10.1002/(SICI)1522-2683(20000401)21:6<1037::AID-ELPS1037>3.0. CO;2-V
    • Gorg, A., Obermaier, C., Boguth, G., Harder, A. et al., The current state of two-dimensional electrophoresis with immobilized pH gradients. Electrophoresis 2000, 21, 1037-1053. (Pubitemid 30230771)
    • (2000) Electrophoresis , vol.21 , Issue.6 , pp. 1037-1053
    • Gorg, A.1    Obermaier, C.2    Boguth, G.3    Harder, A.4    Scheibe, B.5    Wildgruber, R.6    Weiss, W.7
  • 4
    • 0035289123 scopus 로고    scopus 로고
    • Differential protein expression in rat trigeminal ganglia during inflammation
    • Friso, G., Kaiser, L., Raud, J., Wikstrom, L., Differential protein expression in rat trigeminal ganglia during inflammation. Proteomics 2001, 1, 397-408. (Pubitemid 33585113)
    • (2001) Proteomics , vol.1 , Issue.3 , pp. 397-408
    • Friso, G.1    Kaiser, L.2    Raud, J.3    Wikstrom, L.4
  • 7
    • 1642524490 scopus 로고    scopus 로고
    • Characterization of Covalent Multimers of Crystallins in Aging Human Lenses
    • DOI 10.1074/jbc.M308884200
    • Srivastava, O. P., Kirk, M. C., Srivastava, K., Characterization of covalent multimers of crystallins in aging human lenses. J. Biol. Chem. 2004, 279, 10901-10909. (Pubitemid 38401580)
    • (2004) Journal of Biological Chemistry , vol.279 , Issue.12 , pp. 10901-10909
    • Srivastava, O.P.1    Kirk, M.C.2    Srivastava, K.3
  • 11
    • 44449118000 scopus 로고    scopus 로고
    • Metalloproteomics in the molecular study of cell physiology and disease
    • Thierse, H. J., Helm, S., Pankert, P., Metalloproteomics in the molecular study of cell physiology and disease. Methods Mol. Biol. 2008, 425, 139-147.
    • (2008) Methods Mol. Biol. , vol.425 , pp. 139-147
    • Thierse, H.J.1    Helm, S.2    Pankert, P.3
  • 12
    • 33750575732 scopus 로고    scopus 로고
    • Protein stains for proteomic applications: Which, when, why?
    • DOI 10.1002/pmic.200600323
    • Miller, I., Crawford, J., Gianazza, E., Protein stains for proteomic applications: which, when, why? Proteomics 2006, 6, 5385-5408. (Pubitemid 44683210)
    • (2006) Proteomics , vol.6 , Issue.20 , pp. 5385-5408
    • Miller, I.1    Crawford, J.2    Gianazza, E.3
  • 13
    • 0034111635 scopus 로고    scopus 로고
    • A thousand points of light: The application of fluorescence detection technologies to two-dimensional gel electrophoresis and proteomics
    • Patton, W. F., A thousand points of light: the application of fluorescence detection technologies to two-dimensional gel electrophoresis and proteomics. Electrophoresis 2000, 21, 1123-1144.
    • (2000) Electrophoresis , vol.21 , pp. 1123-1144
    • Patton, W.F.1
  • 14
    • 33749246403 scopus 로고    scopus 로고
    • 2-D DIGE as a quantitative tool for investigating the HUPO Brain Proteome Project mouse series
    • DOI 10.1002/pmic.200600269
    • Focking, M., Boersema, P. J., O'Donoghue, N., Lubec, G. et al., 2-D DIGE as a quantitative tool for investigating the HUPO Brain Proteome Project mouse series. Proteomics 2006, 6, 4914-4931. (Pubitemid 44483888)
    • (2006) Proteomics , vol.6 , Issue.18 , pp. 4914-4931
    • Focking, M.1    Boersema, P.J.2    O'Donoghue, N.3    Lubec, G.4    Pennington, S.R.5    Cotter, D.R.6    Dunn, M.J.7
  • 15
    • 23844491490 scopus 로고    scopus 로고
    • Maximising sensitivity for detecting changes in protein expression: Experimental design using minimal CyDyes
    • Karp, N. A., Lilley, K. S., Maximising sensitivity for detecting changes in protein expression: experimental design using minimal CyDyes. Proteomics 2005, 5, 3105-3115.
    • (2005) Proteomics , vol.5 , pp. 3105-3115
    • Karp, N.A.1    Lilley, K.S.2
  • 17
    • 0343376097 scopus 로고    scopus 로고
    • Difference gel electrophoresis: A single gel method for detecting changes in protein extracts
    • Unlu, M., Morgan, M. E., Minden, J. S., Difference gel electrophoresis: a single gel method for detecting changes in protein extracts. Electrophoresis 1997, 18, 2071-2077. (Pubitemid 27501267)
    • (1997) Electrophoresis , vol.18 , Issue.11 , pp. 2071-2077
    • Unlu, M.1    Morgan, M.E.2    Minden, J.S.3
  • 18
    • 0036463947 scopus 로고    scopus 로고
    • Evaluation of two-dimensional differential gel electrophoresis for proteomic expression analysis of a model breast cancer cell system
    • Gharbi, S., Gaffney, P., Yang, A., Zvelebil, M. J. et al., Evaluation of two-dimensional differential gel electrophoresis for proteomic expression analysis of a model breast cancer cell system. Mol. Cell. Proteomics 2002, 1, 91-98.
    • (2002) Mol. Cell. Proteomics , vol.1 , pp. 91-98
    • Gharbi, S.1    Gaffney, P.2    Yang, A.3    Zvelebil, M.J.4
  • 19
    • 34247627759 scopus 로고    scopus 로고
    • Two-dimensional fluorescence difference gel electrophoresis for comparative proteomics profiling
    • DOI 10.1038/nprot.2006.256, PII NPROT.2006.256
    • Tannu, N. S., Hemby, S. E., Two-dimensional fluorescence difference gel electrophoresis for comparative proteomics profiling. Nat. Protoc. 2006, 1, 1732-1742. (Pubitemid 46778055)
    • (2006) Nature Protocols , vol.1 , Issue.4 , pp. 1732-1742
    • Tannu, N.S.1    Hemby, S.E.2
  • 20
    • 57649153125 scopus 로고    scopus 로고
    • Difference gel electrophoresis
    • Timms, J. F., Cramer, R., Difference gel electrophoresis. Proteomics 2008, 8, 4886-4897.
    • (2008) Proteomics , vol.8 , pp. 4886-4897
    • Timms, J.F.1    Cramer, R.2
  • 21
    • 0037253267 scopus 로고    scopus 로고
    • A novel experimental design for comparative two-dimensional gel analysis: Two-dimensional difference gel electrophoresis incorporating a pooled internal standard
    • DOI 10.1002/pmic.200390006
    • Alban, A., David, S. O., Bjorkesten, L., Andersson, C. et al., A novel experimental design for comparative two-dimensional gel analysis: two-dimensional difference gel electrophoresis incorporating a pooled internal standard. Proteomics 2003, 3, 36-44. (Pubitemid 36151066)
    • (2003) Proteomics , vol.3 , Issue.1 , pp. 36-44
    • Alban, A.1    David, S.O.2    Bjorkesten, L.3    Andersson, C.4    Sloge, E.5    Lewis, S.6    Currie, I.7
  • 22
    • 1542720668 scopus 로고    scopus 로고
    • Mechanisms of hydrazine toxicity in rat liver investigated by proteomics and multivariate data analysis
    • Kleno, T. G., Leonardsen, L. R., Kjeldal, H. O., Laursen, S. M. et al., Mechanisms of hydrazine toxicity in rat liver investigated by proteomics and multivariate data analysis. Proteomics 2004, 4, 868-880.
    • (2004) Proteomics , vol.4 , pp. 868-880
    • Kleno, T.G.1    Leonardsen, L.R.2    Kjeldal, H.O.3    Laursen, S.M.4
  • 24
    • 0043166918 scopus 로고    scopus 로고
    • Evaluation of saturation labelling two-dimensional difference gel electrophoresis fluorescent dyes
    • DOI 10.1002/pmic.200300439
    • Shaw, J., Rowlinson, R., Nickson, J., Stone, T. et al., Evaluation of saturation labelling two-dimensional difference gel electrophoresis fluorescent dyes. Proteomics 2003, 3, 1181-1195. (Pubitemid 36929540)
    • (2003) Proteomics , vol.3 , Issue.7 , pp. 1181-1195
    • Shaw, J.1    Rowlinson, R.2    Nickson, J.3    Stone, T.4    Sweet, A.5    Williams, K.6    Tonge, R.7
  • 25
    • 34147161968 scopus 로고    scopus 로고
    • Application of highly sensitive fluorescent dyes (CyDye DIGE Fluor saturation dyes) to laser microdissection and two-dimensional difference gel electrophoresis (2D-DIGE) for cancer proteomics
    • Kondo, T., Hirohashi, S., Application of highly sensitive fluorescent dyes (CyDye DIGE Fluor saturation dyes) to laser microdissection and two-dimensional difference gel electrophoresis (2D-DIGE) for cancer proteomics. Nat. Protoc. 2006, 1, 2940-2956.
    • (2006) Nat. Protoc. , vol.1 , pp. 2940-2956
    • Kondo, T.1    Hirohashi, S.2
  • 26
    • 0013770208 scopus 로고
    • Reactions of N-ethylmaleimide with peptides and amino acids
    • Smyth, D. G., Blumenfeld, O. O., Konigsberg, W., Reactions of N-ethylmaleimide with peptides and amino acids. Biochem. J. 1964, 91, 589-595.
    • (1964) Biochem. J. , vol.91 , pp. 589-595
    • Smyth, D.G.1    Blumenfeld, O.O.2    Konigsberg, W.3
  • 28
    • 0029927505 scopus 로고    scopus 로고
    • Mass spectrometric sequencing of proteins from silver-stained polyacrylamide gels
    • DOI 10.1021/ac950914h
    • Shevchenko, A., Wilm, M., Vorm, O., Mann, M., Mass spectrometric sequencing of proteins silver-stained polyacrylamide gels. Anal. Chem. 1996, 68, 850-858. (Pubitemid 26101214)
    • (1996) Analytical Chemistry , vol.68 , Issue.5 , pp. 850-858
    • Shevchenko, A.1    Wilm, M.2    Vorm, O.3    Mann, M.4
  • 29
    • 33646036352 scopus 로고    scopus 로고
    • Interactions of chemicals and metal ions with proteins and role for immune responses
    • Martin, S. F., Merfort, I., Thierse, H. J., Interactions of chemicals and metal ions with proteins and role for immune responses. Mini Rev. Med. Chem. 2006, 6, 247-255.
    • (2006) Mini Rev. Med. Chem. , vol.6 , pp. 247-255
    • Martin, S.F.1    Merfort, I.2    Thierse, H.J.3
  • 30
    • 17644404780 scopus 로고    scopus 로고
    • T cell receptor (TCR) interaction with haptens: Metal ions as non-classical haptens
    • DOI 10.1016/j.tox.2004.12.015, Proceedings of the Drug Hypersensivity Meeting
    • Thierse, H. J., Gamerdinger, K., Junkes, C., Guerreiro, N., Weltzien, H. U., T cell receptor (TCR) interaction with haptens: metal ions as non-classical haptens. Toxicology 2005, 209, 101-107. (Pubitemid 40568635)
    • (2005) Toxicology , vol.209 , Issue.2 , pp. 101-107
    • Thierse, H.-J.1    Gamerdinger, K.2    Junkes, C.3    Guerreiro, N.4    Weltzien, H.U.5
  • 33
    • 0035346790 scopus 로고    scopus 로고
    • A comparison between Sypro Ruby and ruthenium ii tris (bathophenanthroline disulfonate) as fluorescent stains for protein detection in gels
    • Rabilloud, T., Strub, J. M., Luche, S., van Dorsselaer, A., Lunardi, J., A comparison between Sypro Ruby and ruthenium II tris (bathophenanthroline disulfonate) as fluorescent stains for protein detection in gels. Proteomics 2001, 1, 699-704. (Pubitemid 33588320)
    • (2001) Proteomics , vol.1 , Issue.5 , pp. 699-704
    • Rabilloud, T.1    Strub, J.-M.2    Luche, S.3    Van Dorsselaer, A.4    Lunardi, J.5
  • 34
    • 0036246088 scopus 로고    scopus 로고
    • Quantitative proteome analysis by solid-phase isotope tagging and mass spectrometry
    • DOI 10.1038/nbt0502-512
    • Zhou, H., Ranish, J. A., Watts, J. D., Aebersold, R., Quantitative proteome analysis by solid-phase isotope tagging and mass spectrometry. Nat. Biotechnol. 2002, 20, 512-515. (Pubitemid 34495941)
    • (2002) Nature Biotechnology , vol.20 , Issue.5 , pp. 512-515
    • Zhou, H.1    Ranish, J.A.2    Watts, J.D.3    Aebersold, R.4
  • 35
    • 11144252625 scopus 로고    scopus 로고
    • Isotope-coded affinity tag (ICAT) approach to redox proteomics: Identification and quantitation of oxidant-sensitive cysteine thiols in complex protein mixtures
    • DOI 10.1021/pr049887e
    • Sethuraman, M., McComb, M. E., Huang, H., Huang, S. et al., Isotope-coded affinity tag (ICAT) approach to redox proteomics: identification and quantitation of oxidant-sensitive cysteine thiols in complex protein mixtures. J. Proteome Res. 2004, 3, 1228-1233. (Pubitemid 40040377)
    • (2004) Journal of Proteome Research , vol.3 , Issue.6 , pp. 1228-1233
    • Sethuraman, M.1    McComb, M.E.2    Huang, H.3    Huang, S.4    Heibeck, T.5    Costello, C.E.6    Cohen, R.A.7
  • 36
    • 0032875697 scopus 로고    scopus 로고
    • Quantitative analysis of complex protein mixtures using isotope-coded affinity tags
    • DOI 10.1038/13690
    • Gygi, S. P., Rist, B., Gerber, S. A., Turecek, F. et al., Quantitative analysis of complex protein mixtures using isotope-coded affinity tags. Nat. Biotechnol. 1999, 17, 994-999. (Pubitemid 29474856)
    • (1999) Nature Biotechnology , vol.17 , Issue.10 , pp. 994-999
    • Gygi, S.P.1    Rist, B.2    Gerber, S.A.3    Turecek, F.4    Gelb, M.H.5    Aebersold, R.6
  • 37
    • 0347134635 scopus 로고    scopus 로고
    • Thiol-reactive dyes for fluorescence labeling of proteomic samples
    • DOI 10.1002/elps.200305478
    • Tyagarajan, K., Pretzer, E., Wiktorowicz, J. E., Thiol-reactive dyes for fluorescence labeling of proteomic samples. Electrophoresis 2003, 24, 2348-2358. (Pubitemid 38089020)
    • (2003) Electrophoresis , vol.24 , Issue.14 , pp. 2348-2358
    • Tyagarajan, K.1    Pretzer, E.2    Wiktorowicz, J.E.3
  • 38
    • 46249114406 scopus 로고    scopus 로고
    • Non-covalent and covalent protein labeling in two-dimensional gel electrophoresis
    • Riederer, B. M., Non-covalent and covalent protein labeling in two-dimensional gel electrophoresis. J. Proteomics 2008, 71, 231-244.
    • (2008) J. Proteomics , vol.71 , pp. 231-244
    • Riederer, B.M.1
  • 39
    • 46249109367 scopus 로고    scopus 로고
    • Serial protein labeling with infrared maleimide dyes to identify cysteine modifications
    • DOI 10.1016/j.jprot.2008.04.006, PII S1874391908000675
    • Riederer, I. M., Herrero, R. M., Leuba, G., Riederer, B. M., Serial protein labeling with infrared maleimide dyes to identify cysteine modifications. J. Proteomics 2008, 71, 222-230. (Pubitemid 351927282)
    • (2008) Journal of Proteomics , vol.71 , Issue.2 , pp. 222-230
    • Riederer, I.M.1    Herrero, R.M.2    Leuba, G.3    Riederer, B.M.4
  • 40
    • 34250331648 scopus 로고    scopus 로고
    • Differential protein labeling with thiol-reactive infrared DY-680 and DY-780 maleimides and analysis by two-dimensional gel electrophoresis
    • Riederer, I. M., Riederer, B. M., Differential protein labeling with thiol-reactive infrared DY-680 and DY-780 maleimides and analysis by two-dimensional gel electrophoresis. Proteomics 2007, 7, 1753-1756.
    • (2007) Proteomics , vol.7 , pp. 1753-1756
    • Riederer, I.M.1    Riederer, B.M.2


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