Solution structure of human Pex5.Pex14.PTS1 protein complexes obtained by small Angle X-ray scattering

Journal of Biological Chemistry

Volumn 284, Issue 37, 2009, Pages 25334-25342

  Shiozawa, Kumiko ^a   Konarev, Petr V ^a   Neufeld, Christian ^a   Wilmanns, Matthias ^a   Svergun, Dmitri I ^a  

^a EUROPEAN MOLECULAR BIOLOGY LABORATORY   (Germany)

Author keywords

[No Author keywords available]

Indexed keywords

DOCKING COMPLEXES; DOCKING MECHANISMS; EXTENDED STRUCTURES; LOW RESOLUTION; MEMBRANE PROTEINS; MULTI-PROTEIN COMPLEX; MULTICOMPONENTS; N-TERMINAL DOMAINS; PEROXISOMAL MATRIX PROTEINS; PEROXISOMAL MEMBRANE PROTEIN; PEROXISOMAL TARGETING SIGNALS; PROTEIN COMPLEXES; SMALL ANGLE X-RAY SCATTERING; SOLUTION STRUCTURES; STATIC LIGHT SCATTERING; STRUCTURAL DATA; STRUCTURAL MODELS;

CYTOLOGY; DOCKING; DYES; MODEL STRUCTURES; PROTEINS; STOICHIOMETRY; X RAY SCATTERING;

SCATTERING;

PEROXIN; PROTEIN PEX14P; PROTEIN PEX5P; PROTEIN PTS1; UNCLASSIFIED DRUG;

AMINO TERMINAL SEQUENCE; ARTICLE; CARBOXY TERMINAL SEQUENCE; COMPLEX FORMATION; HUMAN; LIGHT SCATTERING; MOLECULAR WEIGHT; PRIORITY JOURNAL; PROTEIN DETERMINATION; PROTEIN DOMAIN; PROTEIN FOLDING; PROTEIN INTERACTION; STOICHIOMETRY; STRUCTURE ANALYSIS; X RAY CRYSTALLOGRAPHY;

CHROMATOGRAPHY, GEL; CIRCULAR DICHROISM; CRYSTALLOGRAPHY, X-RAY; HUMANS; LIGHT; MEMBRANE PROTEINS; MODELS, MOLECULAR; MODELS, STATISTICAL; MOLECULAR CONFORMATION; PROTEIN BINDING; PROTEIN CONFORMATION; PROTEIN STRUCTURE, TERTIARY; RECEPTORS, CYTOPLASMIC AND NUCLEAR; REPRESSOR PROTEINS; SCATTERING, RADIATION; X-RAYS;

EID: 69949152541     PISSN: 00219258     EISSN: 1083351X     Source Type: Journal    
DOI: 10.1074/jbc.M109.002311     Document Type: Article

References (42)

1. Purdue, P. E., and Lazarow, P. B. (2001) Annu. Rev. Cell Dev. Biol. 17, 701-752
2. Gatto, G. J., Jr., Geisbrecht, B. V., Gould, S. J., and Berg, J. M. (2000) Nat. Struct. Biol. 7, 1091-1095
3. Kumar, A., Roach, C., Hirsh, I. S., Turley, S., deWalque, S., Michels, P. A., and Hol, W. G. (2001) J. Mol. Biol. 307, 271-282
4. Stanley, W. A., Filipp, F. V., Kursula, P., Schüller, N., Erdmann, R., Schliebs, W., Sattler, M., and Wilmanns, M. (2006) Mol. Cell 24, 653-663
5. Stanley, W. A., Fodor, K., Marti-Renom, M. A., Schliebs, W., and Wilmanns, M. (2007) FEBS Lett. 581, 4795-4802
6. Azevedo, J. E., and Schliebs, W. (2006) Biochim. Biophys. Acta 1763, 1574-1584
7. Nito, K., Hayashi, M., and Nishimura, M. (2002) Plant. Cell Physiol. 43, 355-366
8. Saidowsky, J., Dodt, G., Kirchberg, K., Wegner, A., Nastainczyk, W., Kunau, W. H., and Schliebs, W. (2001) J. Biol. Chem. 276, 34524-34529
9. Otera, H., Setoguchi, K., Hamasaki, M., Kumashiro, T., Shimizu, N., and Fujiki, Y. (2002) Mol. Cell. Biol. 22, 1639-1655
10. Neufeld, C., Filipp, F. V., Simon, B., Neuhaus, A., Schüller, N., David, C., Kooshapur, H., Madl, T., Erdmann, R., Schliebs, W., Wilmanns, M., and Sattler, M. (2009) EMBO J. 28, 745-754
11. Gouveia, A. M., Guimarães, C. P., Oliveira, M. E., Sá-Miranda, C., and Azevedo, J. E. (2003) J. Biol. Chem. 278, 4389-4392
12. Holroyd, C., and Erdmann, R. (2001) FEBS Lett. 501, 6-10
13. Madrid, K. P., De Crescenzo, G., Wang, S., and Jardim, A. (2004) Mol. Cell. Biol. 24, 7331-7344
14. Schnell, D. J., and Hebert, D. N. (2003) Cell 112, 491-505
15. Carvalho, A. F., Costa-Rodrigues, J., Correia, I., Costa Pessoa, J., Faria, T. Q., Martins, C. L., Fransen, M., Sá-Miranda, C., and Azevedo, J. E. (2006) J. Mol. Biol. 356, 864-875
16. Costa-Rodrigues, J., Carvalho, A. F., Fransen, M., Hambruch, E., Schliebs, W., Sá-Miranda, C., and Azevedo, J. E. (2005) J. Biol. Chem. 280, 24404-24411
17. Gouveia, A. M., Reguenga, C., Oliveira, M. E., Sa-Miranda, C., and Azevedo, J. E. (2000) J. Biol. Chem. 275, 32444-32451
18. Wang, D., Visser, N. V., Veenhuis, M., and van der Klei, I. J. (2003) J. Biol. Chem. 278, 43340-43345
19. Stanley, W. A., Versluis, K., Schultz, C., Heck, A. J., and Wilmanns, M. (2007) Arch. Biochem. Biophys. 461, 50-58
20. Wen, J., Arakawa, T., and Philo, J. S. (1996) Anal. Biochem. 240, 155-166
21. Koch, M. H., and Bordas, J. (1983) Nucl. Instrum. Methods 208, 461-469
22. Konarev, P. V., Volkov, V. V., Sokolova, A. V., Koch, M. H. J., and Svergun, D. I. (2003) J. Appl. Crystallogr. 36, 1277-1282
23. Guinier, A. (1939) Ann. Phys. 12, 161-237
24. Svergun, D. I. (1992) J. Appl. Crystallogr. 25, 495-503
25. Porod, G. (1982) in General Theory. Small-angle X-ray Scattering (Glatter, O., and Kratky, O., eds) pp. 17-51, Academic Press, Inc., London
26. Svergun, D. I. (1999) Biophys. J. 76, 2879-2886
27. Svergun, D. I., and Nierhaus, K. H. (2000) J. Biol. Chem. 275, 14432-14439
28. Petoukhov, M. V., and Svergun, D. I. (2005) Biophys. J. 89, 1237-1250
29. Svergun, D. I., Barberato, C., and Koch, M. H. J. (1995) J. Appl. Crystallogr. 28, 768-773
30. Volkov, V. V., and Svergun, D. I. (2003) J. Appl. Crystallogr. 36, 860-864
31. Kozin, M. B., and Svergun, D. I. (2001) J. Appl. Crystallogr. 34, 33-41
32. Feigin, L. A., and Svergun, D. I. (1987) Structure Analysis by Small-angle X-ray and Neutron Scattering (Taylor, G. W., ed) Plenum Press, New York
33. Rubinstein, M., and Colby, R. H. (2003) Polymer Physics, Oxford University Press, Oxford, UK
34. Stanley, W. A., Sokolova, A., Brown, A., Clarke, D. T., Wilmanns, M., and Svergun, D. I. (2004) J. Synchrotron Radiat. 11, 490-496
35. Schliebs, W., Saidowsky, J., Agianian, B., Dodt, G., Herberg, F. W., and Kunau, W. H. (1999) J. Biol. Chem. 274, 5666-5673
36. Dyson, H. J., and Wright, P. E. (2005) Nat. Rev. Mol. Cell Biol. 6, 197-208
37. Shoemaker, B. A., Portman, J. J., and Wolynes, P. G. (2000) Proc. Natl. Acad. Sci. U.S.A. 97, 8868-8873
38. Dafforn, T. R., and Smith, C. J. (2004) EMBO Rep. 5, 1046-1052
39. Dodt, G., Warren, D., Becker, E., Rehling, P., and Gould, S.J. (2001) J. Biol. Chem. 276, 41769-41781
40. Kerssen, D., Hambruch, E., Klaas, W., Platta, H. W., de Kruijff, B., Erdmann, R., Kunau, W. H., and Schliebs, W. (2006) J. Biol. Chem. 281, 27003-27015
41. Brown, L. A., and Baker, A. (2003) J. Cell. Mol. Med. 7, 388-400
42. Moscicka, K. B., Klompmaker, S. H., Wang, D., van der Klei, I. J., and Boekema, E. J. (2007) FEBS Lett. 581, 1758-1762