-
1
-
-
0347723718
-
Methane biogeochemistry and methanogen communities in two northern peatland ecosystems, New York State
-
Basiliko N, Yavitt JB, Dees PM Merkel SM (2003) Methane biogeochemistry and methanogen communities in two northern peatland ecosystems, New York State. Geomicrobiol J 20 : 563 577.
-
(2003)
Geomicrobiol J
, vol.20
, pp. 563-577
-
-
Basiliko, N.1
Yavitt, J.B.2
Dees, P.M.3
Merkel, S.M.4
-
2
-
-
34249675106
-
Transport and thermodynamics constrain belowground carbon turnover in a northern peatland
-
Beer J Blodau C (2007) Transport and thermodynamics constrain belowground carbon turnover in a northern peatland. Geochim Cosmochim Ac 71 : 2989 3002.
-
(2007)
Geochim Cosmochim Ac
, vol.71
, pp. 2989-3002
-
-
Beer, J.1
Blodau, C.2
-
4
-
-
35148865682
-
Distribution of Cren- and Euryarchaeota in Scots pine mycorrhizospheres and boreal forest humus
-
Bomberg M Timonen S (2007) Distribution of Cren- and Euryarchaeota in Scots pine mycorrhizospheres and boreal forest humus. Microb Ecol 54 : 406 416.
-
(2007)
Microb Ecol
, vol.54
, pp. 406-416
-
-
Bomberg, M.1
Timonen, S.2
-
5
-
-
1542377996
-
Paleoecology and high-resolution paleohydrology of a kettle peatland in upper Michigan
-
Booth RK, Jackson ST Gray CED (2004) Paleoecology and high-resolution paleohydrology of a kettle peatland in upper Michigan. Quaternary Res 61 : 1 13.
-
(2004)
Quaternary Res
, vol.61
, pp. 1-13
-
-
Booth, R.K.1
Jackson, S.T.2
Gray, C.E.D.3
-
6
-
-
33745767937
-
Vertical profiles of methanogenesis and methanogens in two contrasting acidic peatlands in central New York State, USA
-
Cadillo-Quiroz H, Brauer S, Yashiro E, Sun C, Yavitt J Zinder S (2006) Vertical profiles of methanogenesis and methanogens in two contrasting acidic peatlands in central New York State, USA. Environ Microbiol 8 : 1428 1440.
-
(2006)
Environ Microbiol
, vol.8
, pp. 1428-1440
-
-
Cadillo-Quiroz, H.1
Brauer, S.2
Yashiro, E.3
Sun, C.4
Yavitt, J.5
Zinder, S.6
-
7
-
-
69949167766
-
-
FINADAPT scenarios for the 21st century: alternative futures for considering adaptation to climate change in Finland. FINADAPT Working Paper 2, Finnish Environment Institute Mimeographs 332, Helsinki, 42pp.
-
Carter TR, Jylhä K, Perrels A, Fronzek S Kankaanpää S (2005) FINADAPT scenarios for the 21st century: alternative futures for considering adaptation to climate change in Finland. FINADAPT Working Paper 2, Finnish Environment Institute Mimeographs 332, Helsinki, 42pp.
-
(2005)
-
-
Carter, T.R.1
Jylhä, K.2
Perrels, A.3
Fronzek, S.4
Kankaanpää, S.5
-
8
-
-
0029477628
-
Radiocarbon evidence for the substrates supporting methane formation within northern Minnesota peatlands
-
Chanton JP, Bauer JE, Glaser PA, Siegel DI, Kelley CA, Tyler SC, Romanowicz EH Lazrus A (1995) Radiocarbon evidence for the substrates supporting methane formation within northern Minnesota peatlands. Geochim Cosmochim Ac 59 : 3663 3668.
-
(1995)
Geochim Cosmochim Ac
, vol.59
, pp. 3663-3668
-
-
Chanton, J.P.1
Bauer, J.E.2
Glaser, P.A.3
Siegel, D.I.4
Kelley, C.A.5
Tyler, S.C.6
Romanowicz, E.H.7
Lazrus, A.8
-
10
-
-
33846046530
-
217 000-year-old DNA sequences of green sulfur bacteria in Mediterranean sapropels and their implications for the reconstruction of the paleoenvironment
-
Coolen MJL Overmann J (2007) 217 000-year-old DNA sequences of green sulfur bacteria in Mediterranean sapropels and their implications for the reconstruction of the paleoenvironment. Environ Microbiol 9 : 238 249.
-
(2007)
Environ Microbiol
, vol.9
, pp. 238-249
-
-
Coolen, M.J.L.1
Overmann, J.2
-
11
-
-
50049114397
-
Damage and degradation rates of extracellular DNA in marine sediments: Implications for the preservation of gene sequences
-
Corinaldesi C, Beolchini F Dell'Anno A (2008) Damage and degradation rates of extracellular DNA in marine sediments: implications for the preservation of gene sequences. Mol Ecol 17 : 3939 3951.
-
(2008)
Mol Ecol
, vol.17
, pp. 3939-3951
-
-
Corinaldesi, C.1
Beolchini, F.2
Dell'Anno, A.3
-
12
-
-
31544483932
-
Community genomics among stratified microbial assemblages in the ocean's interior
-
DeLong EF, Preston CM, Mincer T et al 2006) Community genomics among stratified microbial assemblages in the ocean's interior. Science 311 : 496 503.
-
(2006)
Science
, vol.311
, pp. 496-503
-
-
Delong, E.F.1
Preston, C.M.2
Mincer, T.3
Al, E.4
-
14
-
-
24344446508
-
Methanogen communities in a drained bog: Effect of ash fertilization
-
Galand P, Juottonen H, Fritze H Yrjälä K (2005) Methanogen communities in a drained bog: effect of ash fertilization. Microb Ecol 49 : 209 217.
-
(2005)
Microb Ecol
, vol.49
, pp. 209-217
-
-
Galand, P.1
Juottonen, H.2
Fritze, H.3
Yrjälä, K.4
-
15
-
-
0036890052
-
Depth related diversity of methanogen Archaea in Finnish oligotrophic fen
-
Galand PE, Saarnio S, Fritze H Yrjälä K (2002) Depth related diversity of methanogen Archaea in Finnish oligotrophic fen. FEMS Microbiol Ecol 42 : 441 449.
-
(2002)
FEMS Microbiol Ecol
, vol.42
, pp. 441-449
-
-
Galand, P.E.1
Saarnio, S.2
Fritze, H.3
Yrjälä, K.4
-
16
-
-
0242676203
-
Microsite-dependent changes in methanogenic populations in a boreal oligotrophic fen
-
Galand PE, Fritze H Yrjälä K (2003) Microsite-dependent changes in methanogenic populations in a boreal oligotrophic fen. Environ Microbiol 5 : 1133 1143.
-
(2003)
Environ Microbiol
, vol.5
, pp. 1133-1143
-
-
Galand, P.E.1
Fritze, H.2
Yrjälä, K.3
-
17
-
-
0033867966
-
Taxonomic, phylogenetic, and ecological diversity of methanogenic Archaea
-
Garcia J, Patel BKC Ollivier B (2000) Taxonomic, phylogenetic, and ecological diversity of methanogenic Archaea. Anaerobe 6 : 205 226.
-
(2000)
Anaerobe
, vol.6
, pp. 205-226
-
-
Garcia, J.1
Patel, B.K.C.2
Ollivier, B.3
-
18
-
-
0026271247
-
Northern peatlands: Role in the carbon cycle and probable responses to climatic warming
-
Gorham E (1991) Northern peatlands: role in the carbon cycle and probable responses to climatic warming. Ecol Appl 1 : 182 195.
-
(1991)
Ecol Appl
, vol.1
, pp. 182-195
-
-
Gorham, E.1
-
19
-
-
2542508293
-
Diversity and structure of the methanogenic community in anoxic rice paddy soil microcosms as examined by cultivation and direct 16S rRNA gene sequence retrieval
-
Grosskopf R, Janssen P Liesack W (1998a) Diversity and structure of the methanogenic community in anoxic rice paddy soil microcosms as examined by cultivation and direct 16S rRNA gene sequence retrieval. Appl Environ Microb 64 : 960 969.
-
(1998)
Appl Environ Microb
, vol.64
, pp. 960-969
-
-
Grosskopf, R.1
Janssen, P.2
Liesack, W.3
-
20
-
-
0040336333
-
Novel euryarchaeotal lineages detected on rice roots and in the anoxic bulk soil of flooded rice microcosms
-
Grosskopf R, Stubner S Liesack W (1998b) Novel euryarchaeotal lineages detected on rice roots and in the anoxic bulk soil of flooded rice microcosms. Appl Environ Microb 64 : 4983 4989.
-
(1998)
Appl Environ Microb
, vol.64
, pp. 4983-4989
-
-
Grosskopf, R.1
Stubner, S.2
Liesack, W.3
-
21
-
-
0242578620
-
A simple, fast, and accurate algorithm to estimate large phylogenies by maximum likelihood
-
Guindon S Gascuel O (2003) A simple, fast, and accurate algorithm to estimate large phylogenies by maximum likelihood. Syst Biol 52 : 696 704.
-
(2003)
Syst Biol
, vol.52
, pp. 696-704
-
-
Guindon, S.1
Gascuel, O.2
-
22
-
-
23144433822
-
PHYML: Online - A web server for fast maximum likelihood-based phylogenetic inference
-
Guindon S, Lethiec F, Duroux P Gascuel O (2005) PHYML: online - a web server for fast maximum likelihood-based phylogenetic inference. Nucleic Acids Res 33 : W557 W559.
-
(2005)
Nucleic Acids Res
, vol.33
-
-
Guindon, S.1
Lethiec, F.2
Duroux, P.3
Gascuel, O.4
-
23
-
-
0002051540
-
BioEdit: A user-friendly biological sequence alignment editor and analysis program for Windows 95/98/NT
-
Hall TA (1999) BioEdit: a user-friendly biological sequence alignment editor and analysis program for Windows 95/98/NT. Nucl Acids Symp Ser 41 : 95 98.
-
(1999)
Nucl Acids Symp ser
, vol.41
, pp. 95-98
-
-
Hall, T.A.1
-
24
-
-
34748886657
-
PAST: Paleontological statistics software package for education and data analysis
-
Hammer Q, Harper DAT Ryan PD (2001) PAST: paleontological statistics software package for education and data analysis. Palaeontol Electron 4 : 1 9.
-
(2001)
Palaeontol Electron
, vol.4
, pp. 1-9
-
-
Hammer, Q.1
Harper, D.A.T.2
Ryan, P.D.3
-
25
-
-
40549127742
-
Changes in bacterial and archaeal community structure and functional diversity along a geochemically variable soil profile
-
Hansel CM, Fendorf S, Jardine PM Francis CA (2008) Changes in bacterial and archaeal community structure and functional diversity along a geochemically variable soil profile. Appl Environ Microb 74 : 1620 1633.
-
(2008)
Appl Environ Microb
, vol.74
, pp. 1620-1633
-
-
Hansel, C.M.1
Fendorf, S.2
Jardine, P.M.3
Francis, C.A.4
-
27
-
-
33745176593
-
Effects of water regime on archaeal community composition in Arctic soils
-
Høj L, Rusten M, Haugen LE, Olsen RA Torsvik VL (2006) Effects of water regime on archaeal community composition in Arctic soils. Environ Microbiol 8 : 984 996.
-
(2006)
Environ Microbiol
, vol.8
, pp. 984-996
-
-
Høj, L.1
Rusten, M.2
Haugen, L.E.3
Olsen, R.A.4
Torsvik, V.L.5
-
28
-
-
0030762089
-
Spatial distribution of microbial methane production pathways in temperate zone wetland soils: Stable carbon and hydrogen isotope evidence
-
Hornibrook ERC, Longstaffe FJ Fyfe WS (1997) Spatial distribution of microbial methane production pathways in temperate zone wetland soils: stable carbon and hydrogen isotope evidence. Geochim Cosmochim Ac 61 : 745 753.
-
(1997)
Geochim Cosmochim Ac
, vol.61
, pp. 745-753
-
-
Hornibrook, E.R.C.1
Longstaffe, F.J.2
Fyfe, W.S.3
-
29
-
-
5044240973
-
Bellerophon: A program to detect chimeric sequences in multiple sequence alignments
-
Huber T, Faulkner G Hugenholtz P (2004) Bellerophon: a program to detect chimeric sequences in multiple sequence alignments. Bioinformatics 20 : 2317 2319.
-
(2004)
Bioinformatics
, vol.20
, pp. 2317-2319
-
-
Huber, T.1
Faulkner, G.2
Hugenholtz, P.3
-
30
-
-
48749094780
-
Dominance of putative marine benthic Archaea in Qinghai Lake, north-western China
-
Jiang H, Dong H, Yu B, Ye Q, Shen J, Rowe H Zhang C (2008) Dominance of putative marine benthic Archaea in Qinghai Lake, north-western China. Environ Microbiol 10 : 2355 2367.
-
(2008)
Environ Microbiol
, vol.10
, pp. 2355-2367
-
-
Jiang, H.1
Dong, H.2
Yu, B.3
Ye, Q.4
Shen, J.5
Rowe, H.6
Zhang, C.7
-
31
-
-
25144493755
-
Methanogen communities and Bacteria along an ecohydrological gradient in a northern raised bog complex
-
Juottonen H, Galand P, Tuittila E, Laine J, Fritze H Yrjälä K (2005) Methanogen communities and Bacteria along an ecohydrological gradient in a northern raised bog complex. Environ Microbiol 7 : 1547 1557.
-
(2005)
Environ Microbiol
, vol.7
, pp. 1547-1557
-
-
Juottonen, H.1
Galand, P.2
Tuittila, E.3
Laine, J.4
Fritze, H.5
Yrjälä, K.6
-
32
-
-
55549092047
-
Seasonality of rDNA- and rRNA-derived archaeal communities and methanogenic potential in a boreal mire
-
Juottonen H, Tuittila ES, Juutinen S, Fritze H Yrjälä K (2008) Seasonality of rDNA- and rRNA-derived archaeal communities and methanogenic potential in a boreal mire. ISME J 2 : 1157 1168.
-
(2008)
ISME J
, vol.2
, pp. 1157-1168
-
-
Juottonen, H.1
Tuittila, E.S.2
Juutinen, S.3
Fritze, H.4
Yrjälä, K.5
-
33
-
-
0030894624
-
Novel group within the kingdom Crenarchaeota from boreal forest soil
-
Jurgens G, Lindström K Saano A (1997) Novel group within the kingdom Crenarchaeota from boreal forest soil. Appl Environ Microb 63 : 803 805.
-
(1997)
Appl Environ Microb
, vol.63
, pp. 803-805
-
-
Jurgens, G.1
Lindström, K.2
Saano, A.3
-
34
-
-
2142695716
-
Depth-related change in archaeal community structure in a freshwater lake sediment as determined with denaturing gradient gel electrophoresis of amplified 16S rRNA genes and reversely transcribed rRNA fragments
-
Koizumi Y, Takii S Fukui M (2004) Depth-related change in archaeal community structure in a freshwater lake sediment as determined with denaturing gradient gel electrophoresis of amplified 16S rRNA genes and reversely transcribed rRNA fragments. FEMS Microbiol Ecol 48 : 285 292.
-
(2004)
FEMS Microbiol Ecol
, vol.48
, pp. 285-292
-
-
Koizumi, Y.1
Takii, S.2
Fukui, M.3
-
35
-
-
44849132370
-
Decomposition and fungi of needle litter from slow- and fast-growing Norway spruce (Picea abies) clones
-
Korkama-Rajala T, Muller MM Pennanen T (2008) Decomposition and fungi of needle litter from slow- and fast-growing Norway spruce (Picea abies) clones. Microb Ecol 56 : 76 89.
-
(2008)
Microb Ecol
, vol.56
, pp. 76-89
-
-
Korkama-Rajala, T.1
Muller, M.M.2
Pennanen, T.3
-
36
-
-
6944237344
-
Acetoclastic and hydrogenotrophic methane production and methanogenic populations in an acidic West-Siberian peat bog
-
Kotsyurbenko OR, Chin KJ, Glagolev MV, Stubner S, Simankova MV, Nozhevnikova AN Conrad R (2004) Acetoclastic and hydrogenotrophic methane production and methanogenic populations in an acidic West-Siberian peat bog. Environ Microbiol 6 : 1159 1173.
-
(2004)
Environ Microbiol
, vol.6
, pp. 1159-1173
-
-
Kotsyurbenko, O.R.1
Chin, K.J.2
Glagolev, M.V.3
Stubner, S.4
Simankova, M.V.5
Nozhevnikova, A.N.6
Conrad, R.7
-
37
-
-
36849019512
-
Activity and metabolic regulation of methane production in deep peat profiles of boreal bogs
-
Kravchenko IK Sirin AA (2007) Activity and metabolic regulation of methane production in deep peat profiles of boreal bogs. Microbiology 76 : 888 895.
-
(2007)
Microbiology
, vol.76
, pp. 888-895
-
-
Kravchenko, I.K.1
Sirin, A.A.2
-
38
-
-
0036253733
-
Effects of amendment with ferrihydrite and gypsum on the structure and activity of methanogenic populations in rice field soil
-
Lueders T Friedrich M (2002) Effects of amendment with ferrihydrite and gypsum on the structure and activity of methanogenic populations in rice field soil. Appl Environ Microb 68 : 2484 2494.
-
(2002)
Appl Environ Microb
, vol.68
, pp. 2484-2494
-
-
Lueders, T.1
Friedrich, M.2
-
39
-
-
38949113818
-
Subfossil 16S rRNA gene sequences of green sulfur bacteria in the Black Sea and their implications for past photic zone anoxia
-
Manske AK, Henssge U, Glaeser J Overmann J (2008) Subfossil 16S rRNA gene sequences of green sulfur bacteria in the Black Sea and their implications for past photic zone anoxia. Appl Environ Microb 74 : 624 632.
-
(2008)
Appl Environ Microb
, vol.74
, pp. 624-632
-
-
Manske, A.K.1
Henssge, U.2
Glaeser, J.3
Overmann, J.4
-
40
-
-
33644954621
-
Methanogen communities along a primary succession transect of mire ecosystems
-
Merilä P, Galand PE, Fritze H, Tuittila ES, Kukko-oja K, Laine J Yrjälä K (2006) Methanogen communities along a primary succession transect of mire ecosystems. FEMS Microbiol Ecol 55 : 221 229.
-
(2006)
FEMS Microbiol Ecol
, vol.55
, pp. 221-229
-
-
Merilä, P.1
Galand, P.E.2
Fritze, H.3
Tuittila, E.S.4
Kukko-Oja, K.5
Laine, J.6
Yrjälä, K.7
-
41
-
-
29144523199
-
Effect of temperature on anaerobic ethanol oxidation and methanogenesis in acidic peat from a northern wetland
-
Metje M Frenzel P (2005) Effect of temperature on anaerobic ethanol oxidation and methanogenesis in acidic peat from a northern wetland. Appl Environ Microb 71 : 8191 8200.
-
(2005)
Appl Environ Microb
, vol.71
, pp. 8191-8200
-
-
Metje, M.1
Frenzel, P.2
-
42
-
-
46649093406
-
Potential implications of differential preservation of testate amoeba shells for paleoenvironmental reconstruction in peatlands
-
Mitchell EAD, Payne RJ Lamentowicz M (2008) Potential implications of differential preservation of testate amoeba shells for paleoenvironmental reconstruction in peatlands. J Paleolimnol 40 : 603 618.
-
(2008)
J Paleolimnol
, vol.40
, pp. 603-618
-
-
Mitchell, E.A.D.1
Payne, R.J.2
Lamentowicz, M.3
-
43
-
-
14344252220
-
Primary succession of soil Crenarchaeota across a receding glacier foreland
-
Nicol GW, Tscherko D, Embley TM Prosser JI (2005) Primary succession of soil Crenarchaeota across a receding glacier foreland. Environ Microbiol 7 : 337 347.
-
(2005)
Environ Microbiol
, vol.7
, pp. 337-347
-
-
Nicol, G.W.1
Tscherko, D.2
Embley, T.M.3
Prosser, J.I.4
-
44
-
-
52949113790
-
Relative contributions of archaea and bacteria to aerobic ammonia oxidation in the environment
-
Prosser JI Nicol GW (2008) Relative contributions of archaea and bacteria to aerobic ammonia oxidation in the environment. Environ Microbiol 10 : 2931 2941.
-
(2008)
Environ Microbiol
, vol.10
, pp. 2931-2941
-
-
Prosser, J.I.1
Nicol, G.W.2
-
45
-
-
34247172631
-
Links between archaeal community structure, vegetation type and methanogenic pathway in Alaskan peatlands
-
Rooney-Varga JN, Giewat MW, Duddleston KN, Chanton JP Hines ME (2007) Links between archaeal community structure, vegetation type and methanogenic pathway in Alaskan peatlands. FEMS Microbiol Ecol 60 : 240 251.
-
(2007)
FEMS Microbiol Ecol
, vol.60
, pp. 240-251
-
-
Rooney-Varga, J.N.1
Giewat, M.W.2
Duddleston, K.N.3
Chanton, J.P.4
Hines, M.E.5
-
47
-
-
0035693482
-
Estimating methane production rates in bogs and landfills by deuterium enrichment of pore water
-
Siegel DI, Chanton J, Glaser P, Chasar L Rosenberry D (2001) Estimating methane production rates in bogs and landfills by deuterium enrichment of pore water. Global Biogeochem Cy 15 : 967 976.
-
(2001)
Global Biogeochem Cy
, vol.15
, pp. 967-976
-
-
Siegel, D.I.1
Chanton, J.2
Glaser, P.3
Chasar, L.4
Rosenberry, D.5
-
50
-
-
0042674030
-
Phylogenetic comparison of methanogen diversity in different wetland soils
-
Utsumi M, Belova SE, King GM Uchiyama H (2003) Phylogenetic comparison of methanogen diversity in different wetland soils. J Gen Appl Microbiol 49 : 75 83.
-
(2003)
J Gen Appl Microbiol
, vol.49
, pp. 75-83
-
-
Utsumi, M.1
Belova, S.E.2
King, G.M.3
Uchiyama, H.4
-
52
-
-
0028091275
-
The regulation of ribosomal RNA synthesis and bacterial cell growth
-
Wagner R (1994) The regulation of ribosomal RNA synthesis and bacterial cell growth. Arch Microbiol 161 : 100 109.
-
(1994)
Arch Microbiol
, vol.161
, pp. 100-109
-
-
Wagner, R.1
-
53
-
-
11444267235
-
Biogeochemistry of methane exchange between natural wetlands and the atmosphere
-
Whalen SC (2005) Biogeochemistry of methane exchange between natural wetlands and the atmosphere. Environ Eng Sci 22 : 73 94.
-
(2005)
Environ Eng Sci
, vol.22
, pp. 73-94
-
-
Whalen, S.C.1
-
54
-
-
0000656623
-
Microbial diversity of Minnesota peatlands
-
Williams R Crawford R (1983) Microbial diversity of Minnesota peatlands. Microb Ecol 9 : 201 214.
-
(1983)
Microb Ecol
, vol.9
, pp. 201-214
-
-
Williams, R.1
Crawford, R.2
-
55
-
-
0000682442
-
Methane production in Minnesota peatlands
-
Williams R Crawford R (1984) Methane production in Minnesota peatlands. Appl Environ Microb 47 : 1266 1271.
-
(1984)
Appl Environ Microb
, vol.47
, pp. 1266-1271
-
-
Williams, R.1
Crawford, R.2
-
56
-
-
0842267508
-
Wood ash fertilization alters the forest humus Archaea community
-
Yrjälä K, Katainen R, Jurgens G, Saarela U, Saano A, Romantschuk M Fritze H (2004) Wood ash fertilization alters the forest humus Archaea community. Soil Biol Biochem 36 : 199 201.
-
(2004)
Soil Biol Biochem
, vol.36
, pp. 199-201
-
-
Yrjälä, K.1
Katainen, R.2
Jurgens, G.3
Saarela, U.4
Saano, A.5
Romantschuk, M.6
Fritze, H.7
|