Depth-related change in archaeal community structure in a freshwater lake sediment as determined with denaturing gradient gel electrophoresis of amplified 16S rRNA genes and reversely transcribed rRNA fragments

FEMS Microbiology Ecology

Volumn 48, Issue 2, 2004, Pages 285-292

  Koizumi, Yoshikazu ^a   Takii, Susumu ^a   Fukui, Manabu ^a  

^a TOKYO METROPOLITAN UNIVERSITY   (Japan)

Author keywords

16S ribosomal DNA RNA; Crenarchaeota; Denaturing gradient gel electrophoresis; Methane producing archaea; Profundal freshwater lake sediment

Indexed keywords

RIBOSOME RNA; RNA 16S;

COMMUNITY STRUCTURE; GENETIC ANALYSIS; LACUSTRINE DEPOSIT; MICROBIAL COMMUNITY; WATER DEPTH;

ARCHAEBACTERIUM; ARTICLE; CRENARCHAEOTA; DENATURING GRADIENT GEL ELECTROPHORESIS; ELECTROPHORESIS; GENE AMPLIFICATION; GENE SEQUENCE; GENETIC LINKAGE; LAKE SEDIMENT; LOW TEMPERATURE; METHANOGENESIS; METHANOMICROBIALES; MICROBIAL POPULATION DYNAMICS; MOLECULAR PHYLOGENY; MOLECULAR SYSTEMATICS; NONHUMAN; NUCLEOTIDE SEQUENCE; PRIORITY JOURNAL; REVERSE TRANSCRIPTION; STRUCTURAL HOMOLOGY;

ARCHAEA; BIODIVERSITY; CLUSTER ANALYSIS; DNA FINGERPRINTING; DNA, BACTERIAL; DNA, RIBOSOMAL; ELECTROPHORESIS; FRESH WATER; GEOLOGIC SEDIMENTS; MOLECULAR SEQUENCE DATA; NUCLEIC ACID DENATURATION; PHYLOGENY; RNA, RIBOSOMAL, 16S; SEQUENCE ANALYSIS, DNA; SEQUENCE HOMOLOGY;

ARCHAEA; CRENARCHAEOTA; EURYARCHAEOTA; METHANOMICROBIALES; METHANOSAETACEAE;

EID: 2142695716     PISSN: 01686496     EISSN: None     Source Type: Journal    
DOI: 10.1016/j.femsec.2004.02.013     Document Type: Article

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