메뉴 건너뛰기




Volumn 108, Issue 1, 2009, Pages 125-133

Matrin 3: Chromosomal distribution and protein interactions

Author keywords

Chromosome territories; Fluorescence in situ hybridization; Matrin 3; Nuclear matrix

Indexed keywords

MATRILYSIN; MATRIN 3; NUCLEAR MATRIX PROTEIN; UNCLASSIFIED DRUG;

EID: 69249098272     PISSN: 07302312     EISSN: 10974644     Source Type: Journal    
DOI: 10.1002/jcb.22234     Document Type: Article
Times cited : (62)

References (51)
  • 2
    • 0034161939 scopus 로고    scopus 로고
    • The MAR-binding protein SATB1 orchestrates temporal and spatial expression of multiple genes during T-cell development
    • Alvarez JD, Yasui DH, Niida H, Joh T, Loh DY, Kohwi-Shigematsu T. 2000. The MAR-binding protein SATB1 orchestrates temporal and spatial expression of multiple genes during T-cell development. Genes Dev 14:521-535.
    • (2000) Genes Dev , vol.14 , pp. 521-535
    • Alvarez, J.D.1    Yasui, D.H.2    Niida, H.3    Joh, T.4    Loh, D.Y.5    Kohwi-Shigematsu, T.6
  • 3
    • 0025834953 scopus 로고
    • Molecular cloning of matrin 3. A 125-kilodalton protein of the nuclear matrix contains an extensive acidic domain
    • Belgrader P, Dey R, Berezney R. 1991. Molecular cloning of matrin 3. A 125-kilodalton protein of the nuclear matrix contains an extensive acidic domain. J Biol Chem 266:9893-9899.
    • (1991) J Biol Chem , vol.266 , pp. 9893-9899
    • Belgrader, P.1    Dey, R.2    Berezney, R.3
  • 4
    • 0001532085 scopus 로고
    • Organization and function of the nuclear matrix
    • Hnilica LS, editor, Boca Raton, FL: CRC Press. pp
    • Berezney R. 1984. Organization and function of the nuclear matrix. In: Hnilica LS, editor. Chromosomal non-histone proteins-Structural associations. Boca Raton, FL: CRC Press. pp. 119-180.
    • (1984) Chromosomal non-histone proteins-Structural associations , pp. 119-180
    • Berezney, R.1
  • 5
    • 0036374278 scopus 로고    scopus 로고
    • Regulating the mammalian genome: The role of nuclear architecture
    • Berezney R. 2002. Regulating the mammalian genome: The role of nuclear architecture. Adv Enzyme Regul 42:39-52.
    • (2002) Adv Enzyme Regul , vol.42 , pp. 39-52
    • Berezney, R.1
  • 6
    • 0017687532 scopus 로고
    • Nuclear matrix. Isolation and characterization of a framework structure from rat liver nuclei
    • Berezney R, Coffey DS. 1977. Nuclear matrix. Isolation and characterization of a framework structure from rat liver nuclei. J Cell Biol 73:616-637.
    • (1977) J Cell Biol , vol.73 , pp. 616-637
    • Berezney, R.1    Coffey, D.S.2
  • 9
    • 0038369968 scopus 로고    scopus 로고
    • Tissue-specific nuclear architecture and gene expression regulated by SATB1
    • Cai S, Han HJ, Kohwi-Shigematsu T. 2003. Tissue-specific nuclear architecture and gene expression regulated by SATB1. Nat Genet 34:42-51.
    • (2003) Nat Genet , vol.34 , pp. 42-51
    • Cai, S.1    Han, H.J.2    Kohwi-Shigematsu, T.3
  • 10
    • 33750465872 scopus 로고    scopus 로고
    • SATB1 packages densely looped, transcriptionally active chromatin for coordinated expression of cytokine genes
    • Cai S, Lee CC, Kohwi-Shigematsu T. 2006. SATB1 packages densely looped, transcriptionally active chromatin for coordinated expression of cytokine genes. Nat Genet 38:1278-1288.
    • (2006) Nat Genet , vol.38 , pp. 1278-1288
    • Cai, S.1    Lee, C.C.2    Kohwi-Shigematsu, T.3
  • 11
    • 0035365808 scopus 로고    scopus 로고
    • Functional architecture in the cell nucleus
    • Dundr M, Misteli T. 2001. Functional architecture in the cell nucleus. Biochem J 356:297-310.
    • (2001) Biochem J , vol.356 , pp. 297-310
    • Dundr, M.1    Misteli, T.2
  • 12
    • 0037305847 scopus 로고    scopus 로고
    • Homeodomain-interacting protein kinase 1 modulates Daxx localization, phosphorylation, and transcriptional activity
    • Ecsedy JA, Michaelson JS, Leder P. 2003. Homeodomain-interacting protein kinase 1 modulates Daxx localization, phosphorylation, and transcriptional activity. Mol Cell Biol 23:950-960.
    • (2003) Mol Cell Biol , vol.23 , pp. 950-960
    • Ecsedy, J.A.1    Michaelson, J.S.2    Leder, P.3
  • 14
    • 0028773273 scopus 로고
    • Nucleic-acid-binding properties of hnRNP-U/SAF-A, a nuclear-matrix protein which binds DNA and RNA in vivo and in vitro
    • Fackelmayer FO, Dahm K, Renz A, Ramsperger U, Richter A. 1994. Nucleic-acid-binding properties of hnRNP-U/SAF-A, a nuclear-matrix protein which binds DNA and RNA in vivo and in vitro. Eur J Biochem 221:749-757.
    • (1994) Eur J Biochem , vol.221 , pp. 749-757
    • Fackelmayer, F.O.1    Dahm, K.2    Renz, A.3    Ramsperger, U.4    Richter, A.5
  • 16
    • 0026562884 scopus 로고
    • Improved method for high efficiency transformation of intact yeast cells
    • Gietz D, St Jean A, Woods RA, Schiestl RH. 1992. Improved method for high efficiency transformation of intact yeast cells. Nucleic Acids Res 20:1425.
    • (1992) Nucleic Acids Res , vol.20 , pp. 1425
    • Gietz, D.1    St Jean, A.2    Woods, R.A.3    Schiestl, R.H.4
  • 17
    • 23244449018 scopus 로고    scopus 로고
    • Activation of NMDA receptors induces protein kinase A-mediated phosphorylation and degradation of matrin 3. Blocking these effects prevents NMDA-induced neuronal death
    • Giordano G, Sanchez-Perez AM, Montoliu C, Berezney R, Malyavantham K, Costa LG, Calvete JJ, Felipo V. 2005. Activation of NMDA receptors induces protein kinase A-mediated phosphorylation and degradation of matrin 3. Blocking these effects prevents NMDA-induced neuronal death. J Neurochem 94:808-818.
    • (2005) J Neurochem , vol.94 , pp. 808-818
    • Giordano, G.1    Sanchez-Perez, A.M.2    Montoliu, C.3    Berezney, R.4    Malyavantham, K.5    Costa, L.G.6    Calvete, J.J.7    Felipo, V.8
  • 18
    • 0039989823 scopus 로고    scopus 로고
    • The scaffold/matrix attachment region binding protein hnRNP-U (SAF-A) is directly bound to chromosomal DNA in vivo: A chemical cross-linking study
    • Gohring F, Fackelmayer FO. 1997. The scaffold/matrix attachment region binding protein hnRNP-U (SAF-A) is directly bound to chromosomal DNA in vivo: A chemical cross-linking study. Biochemistry 36:8276-8283.
    • (1997) Biochemistry , vol.36 , pp. 8276-8283
    • Gohring, F.1    Fackelmayer, F.O.2
  • 19
    • 59649111304 scopus 로고    scopus 로고
    • Nuclear matrix binding is critical for progesterone receptor movement into nuclear foci
    • Graham JD, Hanson AR, Croft AJ, Fox AH, Clarke CL. 2008. Nuclear matrix binding is critical for progesterone receptor movement into nuclear foci. FASEB J 23(2):546-556.
    • (2008) FASEB J , vol.23 , Issue.2 , pp. 546-556
    • Graham, J.D.1    Hanson, A.R.2    Croft, A.J.3    Fox, A.H.4    Clarke, C.L.5
  • 20
    • 40749094918 scopus 로고    scopus 로고
    • SATB1 reprogrammes gene expression to promote breast tumour growth and metastasis
    • Han HJ, Russo J, Kohwi Y, Kohwi-Shigematsu T. 2008. SATB1 reprogrammes gene expression to promote breast tumour growth and metastasis. Nature 452:187-193.
    • (2008) Nature , vol.452 , pp. 187-193
    • Han, H.J.1    Russo, J.2    Kohwi, Y.3    Kohwi-Shigematsu, T.4
  • 21
    • 0025270026 scopus 로고
    • Core filaments of the nuclear matrix
    • He DC, Nickerson JA, Penman S. 1990. Core filaments of the nuclear matrix. J Cell Biol 110:569-580.
    • (1990) J Cell Biol , vol.110 , pp. 569-580
    • He, D.C.1    Nickerson, J.A.2    Penman, S.3
  • 23
    • 0034627115 scopus 로고    scopus 로고
    • Transcription modulation by a rat nuclear scaffold protein, P130, and a rat highly repetitive DNA component or various types of animal and plant matrix or scaffold attachment regions
    • Hibino Y, Ohzeki H, Sugano N, Hiraga K. 2000. Transcription modulation by a rat nuclear scaffold protein, P130, and a rat highly repetitive DNA component or various types of animal and plant matrix or scaffold attachment regions. Biochem Biophys Res Commun 279:282-287.
    • (2000) Biochem Biophys Res Commun , vol.279 , pp. 282-287
    • Hibino, Y.1    Ohzeki, H.2    Sugano, N.3    Hiraga, K.4
  • 24
    • 0037217365 scopus 로고    scopus 로고
    • HnRNP L stimulates splicing of the eNOS gene by binding to variable-length CA repeats
    • Hui J, Stangl K, Lane WS, Bindereif A. 2003. HnRNP L stimulates splicing of the eNOS gene by binding to variable-length CA repeats. Nat Struct Biol 10:33-37.
    • (2003) Nat Struct Biol , vol.10 , pp. 33-37
    • Hui, J.1    Stangl, K.2    Lane, W.S.3    Bindereif, A.4
  • 25
    • 38649129366 scopus 로고    scopus 로고
    • Diverse roles of hnRNP L in mammalian mRNA processing: A combined microarray and RNAi analysis
    • Hung LH, Heiner M, Hui J, Schreiner S, Benes V, Bindereif A. 2008. Diverse roles of hnRNP L in mammalian mRNA processing: A combined microarray and RNAi analysis. RNA 14:284-296.
    • (2008) RNA , vol.14 , pp. 284-296
    • Hung, L.H.1    Heiner, M.2    Hui, J.3    Schreiner, S.4    Benes, V.5    Bindereif, A.6
  • 26
    • 0030455820 scopus 로고    scopus 로고
    • Genomic libraries and a host strain designed for highly efficient two-hybrid selection in yeast
    • James P, Halladay J, Craig EA. 1996. Genomic libraries and a host strain designed for highly efficient two-hybrid selection in yeast. Genetics 144:1425-1436.
    • (1996) Genetics , vol.144 , pp. 1425-1436
    • James, P.1    Halladay, J.2    Craig, E.A.3
  • 27
    • 31444449277 scopus 로고    scopus 로고
    • Scaffold attachment factor SAFB1 suppresses estrogen receptor alpha-mediated transcription in part via interaction with nuclear receptor corepressor
    • Jiang S, Meyer R, Kang K, Osborne CK, Wong J, Oesterreich S. 2006. Scaffold attachment factor SAFB1 suppresses estrogen receptor alpha-mediated transcription in part via interaction with nuclear receptor corepressor. Mol Endocrinol 20:311-320.
    • (2006) Mol Endocrinol , vol.20 , pp. 311-320
    • Jiang, S.1    Meyer, R.2    Kang, K.3    Osborne, C.K.4    Wong, J.5    Oesterreich, S.6
  • 29
    • 0032562608 scopus 로고    scopus 로고
    • Structure and function in the nucleus
    • Lamond AI, Earnshaw WC. 1998. Structure and function in the nucleus. Science 280:547-553.
    • (1998) Science , vol.280 , pp. 547-553
    • Lamond, A.I.1    Earnshaw, W.C.2
  • 30
    • 33846283384 scopus 로고    scopus 로고
    • Dynamic genome architecture in the nuclear space: Regulation of gene expression in three dimensions
    • Lanctot C, Cheutin T, Cremer M, Cavalli G, Cremer T. 2007. Dynamic genome architecture in the nuclear space: Regulation of gene expression in three dimensions. Nat Rev Genet 8:104-115.
    • (2007) Nat Rev Genet , vol.8 , pp. 104-115
    • Lanctot, C.1    Cheutin, T.2    Cremer, M.3    Cavalli, G.4    Cremer, T.5
  • 31
    • 0033538846 scopus 로고    scopus 로고
    • Association of chromosome territories with the nuclear matrix. Disruption of human chromosome territories correlates with the release of a subset of nuclear matrix proteins
    • Ma H, Siegel AJ, Berezney R. 1999. Association of chromosome territories with the nuclear matrix. Disruption of human chromosome territories correlates with the release of a subset of nuclear matrix proteins. J Cell Biol 146:531-542.
    • (1999) J Cell Biol , vol.146 , pp. 531-542
    • Ma, H.1    Siegel, A.J.2    Berezney, R.3
  • 33
    • 56149099862 scopus 로고    scopus 로고
    • Spatio-temporal dynamics of replication and transcription sites in the mammalian cell nucleus
    • Malyavantham KS, Bhattacharya S, Alonso WD, Acharya R, Berezney R. 2008a. Spatio-temporal dynamics of replication and transcription sites in the mammalian cell nucleus. Chromosoma 117(6):553-567.
    • (2008) Chromosoma , vol.117 , Issue.6 , pp. 553-567
    • Malyavantham, K.S.1    Bhattacharya, S.2    Alonso, W.D.3    Acharya, R.4    Berezney, R.5
  • 34
    • 54849442463 scopus 로고    scopus 로고
    • Identifying functional neighborhoods within the cell nucleus: Proximity analysis of early S-phase replicating chromatin domains to sites of transcription, RNA polymerase II, HP1gamma, matrin 3 and SAF-A
    • Malyavantham KS, Bhattacharya S, Barbeitos M, Mukherjee L, Xu J, Fackelmayer FO, Berezney R. 2008b. Identifying functional neighborhoods within the cell nucleus: Proximity analysis of early S-phase replicating chromatin domains to sites of transcription, RNA polymerase II, HP1gamma, matrin 3 and SAF-A. J Cell Biochem 105:391-403.
    • (2008) J Cell Biochem , vol.105 , pp. 391-403
    • Malyavantham, K.S.1    Bhattacharya, S.2    Barbeitos, M.3    Mukherjee, L.4    Xu, J.5    Fackelmayer, F.O.6    Berezney, R.7
  • 35
    • 33847077659 scopus 로고    scopus 로고
    • Beyond the sequence: Cellular organization of genome function
    • Misteli T. 2007. Beyond the sequence: Cellular organization of genome function. Cell 128:787-800.
    • (2007) Cell , vol.128 , pp. 787-800
    • Misteli, T.1
  • 37
    • 0025790440 scopus 로고
    • Nuclear matrins: Identification of the major nuclear matrix proteins
    • Nakayasu H, Berezney R. 1991. Nuclear matrins: Identification of the major nuclear matrix proteins. Proc Natl Acad Sci USA 88:10312-10316.
    • (1991) Proc Natl Acad Sci USA , vol.88 , pp. 10312-10316
    • Nakayasu, H.1    Berezney, R.2
  • 39
    • 53549100755 scopus 로고    scopus 로고
    • The histone acetyltransferase PCAF associates with actin and hnRNP U for RNA polymerase II transcription
    • Obrdlik A, Kukalev A, Louvet E, Farrants AK, Caputo L, Percipalle P. 2008. The histone acetyltransferase PCAF associates with actin and hnRNP U for RNA polymerase II transcription. Mol Cell Biol 28:6342-6357.
    • (2008) Mol Cell Biol , vol.28 , pp. 6342-6357
    • Obrdlik, A.1    Kukalev, A.2    Louvet, E.3    Farrants, A.K.4    Caputo, L.5    Percipalle, P.6
  • 40
    • 0242443220 scopus 로고    scopus 로고
    • Scaffold attachment factors SAFB1 and SAF B2: Innocent bystanders or critical players in breast tumorigenesis?
    • Oesterreich S. 2003. Scaffold attachment factors SAFB1 and SAF B2: Innocent bystanders or critical players in breast tumorigenesis? J Cell Biochem 90:653-661.
    • (2003) J Cell Biochem , vol.90 , pp. 653-661
    • Oesterreich, S.1
  • 41
    • 0034463079 scopus 로고    scopus 로고
    • Tamoxifen-bound estrogen receptor (ER) strongly interacts with the nuclear matrix protein HET/SAF-B, a novel inhibitor of ER-mediated transactivation
    • Oesterreich S, Zhang Q, Hopp T, Fuqua SA, Michaelis M, Zhao HH, Davie JR, Osborne CK, Lee AV. 2000. Tamoxifen-bound estrogen receptor (ER) strongly interacts with the nuclear matrix protein HET/SAF-B, a novel inhibitor of ER-mediated transactivation. Mol Endocrinol 14:369-381.
    • (2000) Mol Endocrinol , vol.14 , pp. 369-381
    • Oesterreich, S.1    Zhang, Q.2    Hopp, T.3    Fuqua, S.A.4    Michaelis, M.5    Zhao, H.H.6    Davie, J.R.7    Osborne, C.K.8    Lee, A.V.9
  • 43
    • 0030971868 scopus 로고    scopus 로고
    • Components of the human SWI/SNF complex are enriched in active chromatin and are associated with the nuclear matrix
    • Reyes JC, Muchardt C, Yaniv M. 1997. Components of the human SWI/SNF complex are enriched in active chromatin and are associated with the nuclear matrix. J Cell Biol 137:263-274.
    • (1997) J Cell Biol , vol.137 , pp. 263-274
    • Reyes, J.C.1    Muchardt, C.2    Yaniv, M.3
  • 45
    • 0023648348 scopus 로고
    • Enhanced processivity of nuclear matrix bound DNA polymerase alpha from regenerating rat liver
    • Tubo RA, Martelli AM, Berezney R. 1987. Enhanced processivity of nuclear matrix bound DNA polymerase alpha from regenerating rat liver. Biochemistry 26:5710-5718.
    • (1987) Biochemistry , vol.26 , pp. 5710-5718
    • Tubo, R.A.1    Martelli, A.M.2    Berezney, R.3
  • 46
    • 34547524388 scopus 로고    scopus 로고
    • Matrin 3 is a Ca2+/calmodulin-binding protein cleaved by caspases
    • Valencia CA, Ju W, Liu R. 2007. Matrin 3 is a Ca2+/calmodulin-binding protein cleaved by caspases. Biochem Biophys Res Commun 361:281-286.
    • (2007) Biochem Biophys Res Commun , vol.361 , pp. 281-286
    • Valencia, C.A.1    Ju, W.2    Liu, R.3
  • 48
    • 33845642707 scopus 로고    scopus 로고
    • hnRNP-U enhances the expression of specific genes by stabilizing mRNA
    • Yugami M, Kabe Y, Yamaguchi Y, Wada T, Handa H. 2007. hnRNP-U enhances the expression of specific genes by stabilizing mRNA. FEBS Lett 581:1-7.
    • (2007) FEBS Lett , vol.581 , pp. 1-7
    • Yugami, M.1    Kabe, Y.2    Yamaguchi, Y.3    Wada, T.4    Handa, H.5
  • 51
    • 0035943347 scopus 로고    scopus 로고
    • The fate of dsRNA in the nucleus: A p54(nrb)-containing complex mediates the nuclear retention of promiscuously A-to-I edited RNAs
    • Zhang Z, Carmichael GG. 2001. The fate of dsRNA in the nucleus: A p54(nrb)-containing complex mediates the nuclear retention of promiscuously A-to-I edited RNAs. Cell 106:465-475.
    • (2001) Cell , vol.106 , pp. 465-475
    • Zhang, Z.1    Carmichael, G.G.2


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.