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Volumn 58, Issue 2, 2009, Pages 363-373

Diversity of culturable bacteria isolated from root domains of moso bamboo (Phyllostachys edulis)

Author keywords

[No Author keywords available]

Indexed keywords

BACILLUS (BACTERIUM); BACTERIA (MICROORGANISMS); BURKHOLDERIA; FIRMICUTES; LURIA; PHYLLOSTACHYS PUBESCENS; PROTEOBACTERIA;

EID: 68549105993     PISSN: 00953628     EISSN: None     Source Type: Journal    
DOI: 10.1007/s00248-009-9491-2     Document Type: Article
Times cited : (49)

References (42)
  • 1
    • 34249005168 scopus 로고    scopus 로고
    • Proposal of Lysinibacillus boronitolerans gen. nov. sp. nov., and transfer of Bacillus fusiformis to Lysinibacillus fusiformis comb. nov. and Bacillus sphaericus to Lysinibacillus sphaericus comb. nov
    • Ahmed I, Yokota A, Yamazoe A, Fujiwara T (2007) Proposal of Lysinibacillus boronitolerans gen. nov. sp. nov., and transfer of Bacillus fusiformis to Lysinibacillus fusiformis comb. nov. and Bacillus sphaericus to Lysinibacillus sphaericus comb. nov. Int J Syst Evol Microbiol 57:1117-1125.
    • (2007) Int J Syst Evol Microbiol , vol.57 , pp. 1117-1125
    • Ahmed, I.1    Yokota, A.2    Yamazoe, A.3    Fujiwara, T.4
  • 2
    • 0842330012 scopus 로고    scopus 로고
    • Isolation of endophytic diazotroph Pantoea agglomerans and nondiazotroph Enterobacter asburiae from sweet potato stem in Japan
    • Asis CA Jr, Adachi K (2004) Isolation of endophytic diazotroph Pantoea agglomerans and nondiazotroph Enterobacter asburiae from sweet potato stem in Japan. Lett Appl Microbiol 38:19-23.
    • (2004) Lett Appl Microbiol , vol.38 , pp. 19-23
    • Asis Jr., C.A.1    Adachi, K.2
  • 4
    • 33846133754 scopus 로고    scopus 로고
    • Activities and survival of endophytic bacteria in white clover (Trifolium repens L.)
    • Burch G, Sarathchandra U (2006) Activities and survival of endophytic bacteria in white clover (Trifolium repens L.). Can J Microbiol 52:848-856.
    • (2006) Can J Microbiol , vol.52 , pp. 848-856
    • Burch, G.1    Sarathchandra, U.2
  • 5
    • 65849492259 scopus 로고    scopus 로고
    • Phylogeny and diversity of endophytic Bacillus isolated from medicinal plants
    • Chen L, Zhang X, Lindstrom K (2008) Phylogeny and diversity of endophytic Bacillus isolated from medicinal plants. Acta Microbiol Sin 48:432-438.
    • (2008) Acta Microbiol Sin , vol.48 , pp. 432-438
    • Chen, L.1    Zhang, X.2    Lindstrom, K.3
  • 6
    • 25144473901 scopus 로고    scopus 로고
    • Use of plant growth-promoting bacteria for biocontrol of plant diseases: Principles, mechanisms of action, and future prospects
    • Compant S, Duffy B, Nowak J, Clement C, Barka EA (2005) Use of plant growth-promoting bacteria for biocontrol of plant diseases: principles, mechanisms of action, and future prospects. Appl Environ Microbiol 71:4951-4959.
    • (2005) Appl Environ Microbiol , vol.71 , pp. 4951-4959
    • Compant, S.1    Duffy, B.2    Nowak, J.3    Clement, C.4    Barka, E.A.5
  • 7
    • 0141704522 scopus 로고    scopus 로고
    • Isolation and identification of actinobacteria from surface-sterilized wheat roots
    • Coombs JT, Franco CM (2003) Isolation and identification of actinobacteria from surface-sterilized wheat roots. Appl Environ Microbiol 69:5603-5608.
    • (2003) Appl Environ Microbiol , vol.69 , pp. 5603-5608
    • Coombs, J.T.1    Franco, C.M.2
  • 8
    • 0037335887 scopus 로고    scopus 로고
    • Kinetics and strain specificity of rhizosphere and endophytic colonization by enteric bacteria on seedlings of Medicago sativa and Medicago truncatula
    • Dong Y, Iniguez AL, Ahmer BM, Triplett EW (2003) Kinetics and strain specificity of rhizosphere and endophytic colonization by enteric bacteria on seedlings of Medicago sativa and Medicago truncatula. Appl Environ Microbiol 69:1783-1790.
    • (2003) Appl Environ Microbiol , vol.69 , pp. 1783-1790
    • Dong, Y.1    Iniguez, A.L.2    Ahmer, B.M.3    Triplett, E.W.4
  • 9
    • 0034548840 scopus 로고    scopus 로고
    • Preferential occurrence of diazotrophic endophytes, Azoarcus spp., in wild rice species and land races of Oryza sativa in comparison with modern races
    • Engelhard M, Hurek T, Reinhold-Hurek B (2000) Preferential occurrence of diazotrophic endophytes, Azoarcus spp., in wild rice species and land races of Oryza sativa in comparison with modern races. Environ Microbiol 2:131-141.
    • (2000) Environ Microbiol , vol.2 , pp. 131-141
    • Engelhard, M.1    Hurek, T.2    Reinhold-Hurek, B.3
  • 11
    • 0035378204 scopus 로고    scopus 로고
    • Burkholderia, a genus rich in plant-associated nitrogen fixers with wide environmental and geographic distribution
    • Estrada-De Los Santos P, Bustillos-Cristales R, Caballero-Mellado J (2001) Burkholderia, a genus rich in plant-associated nitrogen fixers with wide environmental and geographic distribution. Appl Environ Microbiol 67:2790-2798.
    • (2001) Appl Environ Microbiol , vol.67 , pp. 2790-2798
    • Estrada-De Los Santos, P.1    Bustillos-Cristales, R.2    Caballero-Mellado, J.3
  • 12
    • 0000461280 scopus 로고
    • Confidence limits on phylogenies: An approach using the bootstrap
    • Felsenstein J (1985) Confidence limits on phylogenies: an approach using the bootstrap. Evolution 39:783-791.
    • (1985) Evolution , vol.39 , pp. 783-791
    • Felsenstein, J.1
  • 13
    • 33646134140 scopus 로고    scopus 로고
    • Inhibition of Salmonella enterica by plant-associated pseudomonads in vitro and on sprouting alfalfa seed
    • Fett WF (2006) Inhibition of Salmonella enterica by plant-associated pseudomonads in vitro and on sprouting alfalfa seed. J Food Prot 69:719-728.
    • (2006) J Food Prot , vol.69 , pp. 719-728
    • Fett, W.F.1
  • 15
    • 33746252513 scopus 로고    scopus 로고
    • Chinese moso bamboo: Its importance
    • Fu J (2001) Chinese moso bamboo: its importance. Bamboo 22:5-7.
    • (2001) Bamboo , vol.22 , pp. 5-7
    • Fu, J.1
  • 16
    • 0032080593 scopus 로고    scopus 로고
    • Diversity of root-associated bacteria associated with field-grown canola (Brassica napus L.) and wheat (Triticum aestivum L.)
    • Germida JJ, Siciliano SD, Freitas JRd, Seib AM (1998) Diversity of root-associated bacteria associated with field-grown canola (Brassica napus L.) and wheat (Triticum aestivum L.). FEMS Microbiol Ecol 26:43-50.
    • (1998) FEMS Microbiol Ecol , vol.26 , pp. 43-50
    • Germida, J.J.1    Siciliano, S.D.2    Freitas, J.R.3    Seib, A.M.4
  • 19
    • 12744279211 scopus 로고    scopus 로고
    • Characterization of a novel plant growth-promoting bacteria strain Delftia tsuruhatensis HR4 both as a diazotroph and a potential biocontrol agent against various plant pathogens
    • Han J, Sun L, Dong X, Cai Z, Sun X, Yang H, Wang Y, Song W (2005) Characterization of a novel plant growth-promoting bacteria strain Delftia tsuruhatensis HR4 both as a diazotroph and a potential biocontrol agent against various plant pathogens. Syst Appl Microbiol 28:66-76.
    • (2005) Syst Appl Microbiol , vol.28 , pp. 66-76
    • Han, J.1    Sun, L.2    Dong, X.3    Cai, Z.4    Sun, X.5    Yang, H.6    Wang, Y.7    Song, W.8
  • 20
    • 41949083782 scopus 로고    scopus 로고
    • Complete genome sequence of the mosquitocidal bacterium Bacillus sphaericus C3-41 and comparison with those of closely related Bacillus species
    • Hu X, Fan W, Han B, Liu H, Zheng D, Li Q, Dong W, Yan J, Gao M, Berry C, Yuan Z (2008) Complete genome sequence of the mosquitocidal bacterium Bacillus sphaericus C3-41 and comparison with those of closely related Bacillus species. J Bacteriol 190:2892-2902.
    • (2008) J Bacteriol , vol.190 , pp. 2892-2902
    • Hu, X.1    Fan, W.2    Han, B.3    Liu, H.4    Zheng, D.5    Li, Q.6    Dong, W.7    Yan, J.8    Gao, M.9    Berry, C.10    Yuan, Z.11
  • 21
    • 43249105567 scopus 로고    scopus 로고
    • Denaturing gradient gel electrophoresis analysis of bacterial community profiles in the rhizosphere of cry1 AC-carrying Brassica rapa subsp. pekinensis
    • Jung S, Park S, Kim D, Kim SB (2008) Denaturing gradient gel electrophoresis analysis of bacterial community profiles in the rhizosphere of cry1 AC-carrying Brassica rapa subsp. pekinensis. J Microbiol 46:12-15.
    • (2008) J Microbiol , vol.46 , pp. 12-15
    • Jung, S.1    Park, S.2    Kim, D.3    Kim, S.B.4
  • 22
    • 0346487136 scopus 로고    scopus 로고
    • Plant root-bacterial interactions in biological control of soilborne diseases and potential extension to systemic and foliar diseases
    • Kloepper JW, Rodriguez-Ubana R, Zehnder GW, Murphy JF, Sikora A E, Fernández C (1999) Plant root-bacterial interactions in biological control of soilborne diseases and potential extension to systemic and foliar diseases. Australas Plant Pathol 28:21-26.
    • (1999) Australas Plant Pathol , vol.28 , pp. 21-26
    • Kloepper, J.W.1    Rodriguez-Ubana, R.2    Zehnder, G.W.3    Murphy, J.F.4    Sikora, A.E.5    Fernández, C.6
  • 24
    • 0001857117 scopus 로고
    • 16S/23S rRNA sequencing
    • In: Stackebrandt E, Goodfellow M (eds), New York: Wiley
    • Lane DJ (1991) 16S/23S rRNA sequencing. In: Stackebrandt E, Goodfellow M (eds) Nucleic acid techniques in bacterial systematics. Wiley, New York, pp 115-175.
    • (1991) Nucleic Acid Techniques in Bacterial Systematics , pp. 115-175
    • Lane, D.J.1
  • 25
    • 66049150989 scopus 로고    scopus 로고
    • Cultivable microbial diversity at the rhizosphere of Phyllostachys pubescens
    • Li L, Liu M, Yang S, Liu L, Miao K, Yang K, Han J (2008) Cultivable microbial diversity at the rhizosphere of Phyllostachys pubescens. Acta Microbiol Sin 48:772-779.
    • (2008) Acta Microbiol Sin , vol.48 , pp. 772-779
    • Li, L.1    Liu, M.2    Yang, S.3    Liu, L.4    Miao, K.5    Yang, K.6    Han, J.7
  • 26
    • 0030297594 scopus 로고    scopus 로고
    • Comparison of aerobic heterotrophic taxa isolated from four root domains of mature sugar beet (Beta vulgaris)
    • Lilley AK, Fry JC, Bailey MJ, Day MJ (1996) Comparison of aerobic heterotrophic taxa isolated from four root domains of mature sugar beet (Beta vulgaris). FEMS Microbiol Ecol 21:231-242.
    • (1996) FEMS Microbiol Ecol , vol.21 , pp. 231-242
    • Lilley, A.K.1    Fry, J.C.2    Bailey, M.J.3    Day, M.J.4
  • 27
    • 34447101498 scopus 로고    scopus 로고
    • The enhanced effect of co-culture on nitrogen-fixing activity of B. sphaerium and B. megaterium
    • Lin M, Cheng M, Li F, Long S (2000) The enhanced effect of co-culture on nitrogen-fixing activity of B. sphaerium and B. megaterium. Acta Agriculturae Nucleatae Sinica 14:337-341.
    • (2000) Acta Agriculturae Nucleatae Sinica , vol.14 , pp. 337-341
    • Lin, M.1    Cheng, M.2    Li, F.3    Long, S.4
  • 29
    • 0032835208 scopus 로고    scopus 로고
    • Phylogenetic diversity of bacterial communities differing in degree of proximity of Lolium perenne and Trifolium repens roots
    • Marilley L, Aragno M (1999) Phylogenetic diversity of bacterial communities differing in degree of proximity of Lolium perenne and Trifolium repens roots. Appl Soil Ecol 13:127-136.
    • (1999) Appl Soil Ecol , vol.13 , pp. 127-136
    • Marilley, L.1    Aragno, M.2
  • 30
    • 0036324293 scopus 로고    scopus 로고
    • Phylogenetic approaches for describing and comparing the diversity of microbial communities
    • Martin AP (2002) Phylogenetic approaches for describing and comparing the diversity of microbial communities. Appl Environ Microbiol 68:3673-3682.
    • (2002) Appl Environ Microbiol , vol.68 , pp. 3673-3682
    • Martin, A.P.1
  • 31
    • 36649010854 scopus 로고    scopus 로고
    • Diversity of cultivated endophytic bacteria from sugarcane: Genetic and biochemical characterization of Burkholderia cepacia complex isolates
    • Mendes R, Pizzirani-Kleiner AA, Araujo WL, Raaijmakers JM (2007) Diversity of cultivated endophytic bacteria from sugarcane: genetic and biochemical characterization of Burkholderia cepacia complex isolates. Appl Environ Microbiol 73:7259-7267.
    • (2007) Appl Environ Microbiol , vol.73 , pp. 7259-7267
    • Mendes, R.1    Pizzirani-Kleiner, A.A.2    Araujo, W.L.3    Raaijmakers, J.M.4
  • 32
    • 22244450022 scopus 로고    scopus 로고
    • Isolation and characterization of bacteria associated with two sand dune plant species, Calystegia soldanella and Elymus mollis
    • Park MS, Jung SR, Lee MS, Kim KO, Do JO, Lee KH, Kim SB, Bae KS (2005) Isolation and characterization of bacteria associated with two sand dune plant species, Calystegia soldanella and Elymus mollis. J Microbiol 43:219-227.
    • (2005) J Microbiol , vol.43 , pp. 219-227
    • Park, M.S.1    Jung, S.R.2    Lee, M.S.3    Kim, K.O.4    Do, J.O.5    Lee, K.H.6    Kim, S.B.7    Bae, K.S.8
  • 33
    • 0034791277 scopus 로고    scopus 로고
    • Diversity of pseudomonads isolated from three different plant rhizospheres
    • Rangarajan S, Loganathan P, Saleena LM, Nair S (2001) Diversity of pseudomonads isolated from three different plant rhizospheres. J Appl Microbiol 91:742-749.
    • (2001) J Appl Microbiol , vol.91 , pp. 742-749
    • Rangarajan, S.1    Loganathan, P.2    Saleena, L.M.3    Nair, S.4
  • 35
    • 0033007256 scopus 로고    scopus 로고
    • Taxonomic diversity of bacteria associated with the roots of field-grown transgenic Brassica napus cv. Quest, compared to the non-transgenic B. napus cv. Excel and B. rapa cv. Parkland
    • Siciliano SD, Germida JJ (1999) Taxonomic diversity of bacteria associated with the roots of field-grown transgenic Brassica napus cv. Quest, compared to the non-transgenic B. napus cv. Excel and B. rapa cv. Parkland. FEMS Microbiol Ecology 29:263-272.
    • (1999) FEMS Microbiol Ecology , vol.29 , pp. 263-272
    • Siciliano, S.D.1    Germida, J.J.2
  • 37
    • 1442310075 scopus 로고    scopus 로고
    • Natural products from endophytic microorganisms
    • Strobel G, Daisy B, Castillo U, Harper J (2004) Natural products from endophytic microorganisms. J Nat Prod 67:257-268.
    • (2004) J Nat Prod , vol.67 , pp. 257-268
    • Strobel, G.1    Daisy, B.2    Castillo, U.3    Harper, J.4
  • 38
    • 41049117454 scopus 로고    scopus 로고
    • Endophytic bacterial diversity in rice (Oryza sativa L.) roots estimated by 16 S rDNA sequence analysis
    • Sun L, Qiu F, Zhang X, Dai X, Dong X, Song W (2008) Endophytic bacterial diversity in rice (Oryza sativa L.) roots estimated by 16 S rDNA sequence analysis. Microb Ecol 55:415-424.
    • (2008) Microb Ecol , vol.55 , pp. 415-424
    • Sun, L.1    Qiu, F.2    Zhang, X.3    Dai, X.4    Dong, X.5    Song, W.6
  • 39
    • 34547781750 scopus 로고    scopus 로고
    • MEGA4: Molecular Evolutionary Genetics Analysis (MEGA) software version 4.0
    • Tamura K, Dudley J, Nei M, Kumar S (2007) MEGA4: Molecular Evolutionary Genetics Analysis (MEGA) software version 4.0. Mol Biol Evol 24:1596-1599.
    • (2007) Mol Biol Evol , vol.24 , pp. 1596-1599
    • Tamura, K.1    Dudley, J.2    Nei, M.3    Kumar, S.4
  • 40
    • 0031574072 scopus 로고    scopus 로고
    • The CLUSTAL_X windows interface: Flexible strategies for multiple sequence alignment aided by quality analysis tools
    • Thompson JD, Gibson TJ, Plewniak F, Jeanmougin F, Higgins DG (1997) The CLUSTAL_X windows interface: flexible strategies for multiple sequence alignment aided by quality analysis tools. Nucleic Acids Res 25:4876-4882.
    • (1997) Nucleic Acids Res , vol.25 , pp. 4876-4882
    • Thompson, J.D.1    Gibson, T.J.2    Plewniak, F.3    Jeanmougin, F.4    Higgins, D.G.5
  • 41
    • 0028836170 scopus 로고
    • Endophyte-the evolution of a term, and clarification of its use and definition
    • Wilson D (1995) Endophyte-the evolution of a term, and clarification of its use and definition. Oikos 73:274-276.
    • (1995) Oikos , vol.73 , pp. 274-276
    • Wilson, D.1


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