Automated measurement of permethylated serum N-glycans by MALDI-linear ion trap mass spectrometry

Carbohydrate Research

Volumn 344, Issue 12, 2009, Pages 1550-1557

  Guillard, Maïlys ^a   Gloerich, Jolein ^a   Wessels, Hans J C T ^a   Morava, Eva ^a   Wevers, Ron A ^a   Lefeber, Dirk J ^a  

^a RADBOUD UNIVERSITY MEDICAL CENTER   (Netherlands)

Author keywords

Cyano 4 hydroxycinnamic acid; Glycan profiling; Glycosylation; Linear ion trap; MALDI; N glycans

Indexed keywords

AUTOMATED MEASUREMENT; CLINICAL DIAGNOSTICS; CRYSTALLIZATION PROPERTIES; CYANO-4-HYDROXYCINNAMIC ACIDS; DATA COLLECTION; DIHYDROXYBENZOIC ACIDS; EXOGLYCOSIDASE; GLYCAN PROFILING; GLYCAN STRUCTURES; GLYCANS; HIGH-THROUGHPUT; HIGH-THROUGHPUT APPROACHES; IONIZATION SOURCES; LINEAR ION TRAP; MALDI; N-GLYCAN; N-GLYCANS; NON-HOMOGENEOUS; POSITIONING SYSTEM; PROFILING METHODS; REPRODUCIBILITIES; SAMPLE PROCESSING; STRUCTURAL ASSIGNMENTS; TEST SAMPLES;

ACIDS; AUTOMATION; BODY FLUIDS; CRYSTALLIZATION; ELECTRON TRAPS; ESTERIFICATION; GLYCOSYLATION; MASS SPECTROMETERS; MASS SPECTROMETRY;

IONS;

ALPHA CYANO 4 HYDROXYCINNAMIC ACID; GENTISIC ACID; GLYCAN DERIVATIVE; GLYCOSIDASE;

ARTICLE; AUTOMATION; CARBOHYDRATE ANALYSIS; CRYSTALLIZATION; GLYCOSYLATION; MATRIX ASSISTED LASER DESORPTION IONIZATION TIME OF FLIGHT MASS SPECTROMETRY; PRIORITY JOURNAL; REPRODUCIBILITY;

CARBOHYDRATE SEQUENCE; COUMARIC ACIDS; GLYCOSYLATION; HUMANS; MOLECULAR SEQUENCE DATA; POLYSACCHARIDES; REPRODUCIBILITY OF RESULTS; SPECTROMETRY, MASS, MATRIX-ASSISTED LASER DESORPTION-IONIZATION;

EID: 68249131729     PISSN: 00086215     EISSN: None     Source Type: Journal    
DOI: 10.1016/j.carres.2009.06.010     Document Type: Article

References (50)

1. Kam R.K., Poon T.C., Chan H.L., Wong N., Hui A.Y., and Sung J.J. Clin. Chem. 53 (2007) 1254-1263
2. Zhao J., Simeone D.M., Heidt D., Anderson M.A., and Lubman D.M. J. Proteome Res. 5 (2006) 1792-1802
3. Alavi A., and Axford J.S. Dis. Markers 25 (2008) 193-205
4. Harvey D.J. Mass Spectrom. Rev. 28 (2009) 273-361
5. Prien J.M., Ashline D.J., Lapadula A.J., Zhang H., and Reinhold V.N. J. Am. Soc. Mass Spectrom. 20 (2009) 539-556
6. Marklova E., and Albahri Z. Clin. Chim. Acta 385 (2007) 6-20
7. Wada Y., Nishikawa A., Okamoto N., Inui K., Tsukamoto H., Okada S., and Taniguchi N. Biochem. Biophys. Res. Commun. 189 (1992) 832-836
8. Wada Y. J. Chromatogr., B Anal. Technol. Biomed. Life Sci. 838 (2006) 3-8
9. Butler M., Quelhas D., Critchley A.J., Carchon H., Hebestreit H.F., Hibbert R.G., Vilarinho L., Teles E., Matthijs G., Schollen E., Argibay P., Harvey D.J., Dwek R.A., Jaeken J., and Rudd P.M. Glycobiology 13 (2003) 601-622
10. Barone R., Sturiale L., and Garozzo D. Mass Spectrom. Rev. 28 (2008) 517-542
11. Sagi D., Kienz P., Denecke J., Marquardt T., and Peter-Katalinic J. Proteomics 5 (2005) 2689-2701
12. Haslam S.M., North S.J., and Dell A. Curr. Opin. Struct. Biol. 16 (2006) 584-591
13. Mills P., Mills K., Clayton P., Johnson A., Whitehouse D., and Winchester B. Biochem. J. 359 (2001) 249-254
14. Mills P.B., Mills K., Johnson A.W., Clayton P.T., and Winchester B.G. Proteomics 1 (2001) 778-786
15. Ruhaak L.R., Huhn C., Waterreus W.J., de Boer A.R., Neususs C., Hokke C.H., Deelder A.M., and Wuhrer M. Anal. Chem. 80 (2008) 6119-6126
16. Thaysen-Andersen M., Mysling S., and Hojrup P. Anal. Chem. 81 (2009) 3933-3943
17. Kranz C., Denecke J., Lehrman M.A., Ray S., Kienz P., Kreissel G., Sagi D., Peter-Katalinic J., Freeze H.H., Schmid T., Jackowski-Dohrmann S., Harms E., and Marquardt T. J. Clin. Invest. 108 (2001) 1613-1619
18. Kang P., Mechref Y., Kyselova Z., Goetz J.A., and Novotny M.V. Anal. Chem. 79 (2007) 6064-6073
19. Kang P., Mechref Y., Klouckova I., and Novotny M.V. Rapid Commun. Mass Spectrom. 19 (2005) 3421-3428
20. Faid V., Chirat F., Seta N., Foulquier F., and Morelle W. Proteomics 7 (2007) 1800-1813
21. Morelle W., and Michalski J.C. Nat. Protocols 2 (2007) 1585-1602
22. Ciucanu I., and Kerek F. Carbohydr. Res. 131 (1984) 209-217
23. Wada Y., Azadi P., Costello C.E., Dell A., Dwek R.A., Geyer H., Geyer R., Kakehi K., Karlsson N.G., Kato K., Kawasaki N., Khoo K.H., Kim S., Kondo A., Lattova E., Mechref Y., Miyoshi E., Nakamura K., Narimatsu H., Novotny M.V., Packer N.H., Perreault H., Peter-Katalinic J., Pohlentz G., Reinhold V.N., Rudd P.M., Suzuki A., and Taniguchi N. Glycobiology 17 (2007) 411-422
24. Kang P., Mechref Y., and Novotny M.V. Rapid Commun. Mass Spectrom. 22 (2008) 721-734
25. Babu, P.; North, S. J.; Jang-Lee, J.; Chalabi, S.; Mackerness, K.; Stowell, S. R.; Cummings, R. D.; Rankin, S.; Dell, A.; Haslam, S. M. Glycoconjugate J. 2008, Epub ahead of print.
26. Mechref Y., Kang P., and Novotny M.V. Rapid Commun. Mass Spectrom. 20 (2006) 1381-1389
27. Solouki T., Reinhold B.B., Costello C.E., O'Malley M., Guan S., and Marshall A.G. Anal. Chem. 70 (1998) 857-864
28. An H.J., Miyamoto S., Lancaster K.S., Kirmiz C., Li B., Lam K.S., Leiserowitz G.S., and Lebrilla C.B. J. Proteome Res. 5 (2006) 1626-1635
29. Lancaster K.S., An H.J., Li B., and Lebrilla C.B. Anal. Chem. 78 (2006) 4990-4997
30. Kirmiz C., Li B., An H.J., Clowers B.H., Chew H.K., Lam K.S., Ferrige A., Alecio R., Borowsky A.D., Sulaimon S., Lebrilla C.B., and Miyamoto S. Mol. Cell Proteomics 6 (2007) 43-55
31. Haebel S., Bahrke S., and Peter M.G. Anal. Chem. 79 (2007) 5557-5566
32. Britton D.J., Scott G.K., Schilling B., Atsriku C., Held J.M., Gibson B.W., Benz C.C., and Baldwin M.A. J. Am. Soc. Mass Spectrom. 19 (2008) 729-740
33. Atsriku C., Benz C.C., Scott G.K., Gibson B.W., and Baldwin M.A. Anal. Chem. 79 (2007) 3083-3090
34. Creaser C.S., Reynolds J.C., and Harvey D.J. Rapid Commun. Mass Spectrom. 16 (2002) 176-184
35. Devakumar A., Mechref Y., Kang P., Novotny M.V., and Reilly J.P. Rapid Commun. Mass Spectrom. 21 (2007) 1452-1460
36. Harvey D.J. Mass Spectrom. Rev. 27 (2008) 125-201
37. Harvey D.J. Mass Spectrom. Rev. 25 (2006) 595-662
38. Harvey D.J. Mass Spectrom. Rev. 18 (1999) 349-450
39. Luxembourg S.L., McDonnell L.A., Duursma M.C., Guo X., and Heeren R.M. Anal. Chem. 75 (2003) 2333-2341
40. Soltwisch J., Berkenkamp S., and Dreisewerd K. Rapid Commun. Mass Spectrom. 22 (2008) 59-66
41. Snovida S.I., and Perreault H. Rapid Commun. Mass Spectrom. 21 (2007) 3711-3715
42. Harvey D.J. Rapid Commun. Mass Spectrom. 7 (1993) 614-619
43. Stephens E., Maslen S.L., Green L.G., and Williams D.H. Anal. Chem. 76 (2004) 2343-2354
44. Knezevic A., Polasek O., Gornik O., Rudan I., Campbell H., Hayward C., Wright A., Kolcic I., O'Donoghue N., Bones J., Rudd P.M., and Lauc G.J. Proteome Res. 8 (2009) 694-701
45. Domon B., and Costello C.E. Glycoconjugate J. 5 (1988) 397-409
46. Packer N.H., Lawson M.A., Jardine D.R., and Redmond J.W. Glycoconjugate J. 15 (1998) 737-747
47. Garrett T.J., and Yost R.A. Anal. Chem. 78 (2006) 2465-2469
48. Gil G.C., Kim Y.G., and Kim B.G. Anal. Biochem. 379 (2008) 45-59
49. Ceroni A., Maass K., Geyer H., Geyer R., Dell A., and Haslam S.M. J. Proteome Res. 7 (2008) 1650-1659
50. Monroe M.E., Shaw J.L., Daly D.S., Adkins J.N., and Smith R.D. Comput. Biol. Chem. 32 (2008) 215-217