Comparative glycomic mapping through quantitative permethylation and stable-isotope labeling

Analytical Chemistry

Volumn 79, Issue 16, 2007, Pages 6064-6073

  Kang, Pilsoo ^a   Mechref, Yehia ^a   Kyselova, Zuzana ^a   Goetz, John A ^a   Novotny, Milos V ^a  

^a INDIANA UNIVERSITY   (United States)

Author keywords

[No Author keywords available]

Indexed keywords

ISOTOPES; METHYLATION; MOLECULAR STRUCTURE; SAMPLING; SPECTROMETRY;

BIOLOGICAL SAMPLES; GLYCAN QUANTIFICATION; GLYCAN STRUCTURE; PERMETHYLATION;

POLYSACCHARIDES;

GLYCAN DERIVATIVE;

ARTICLE; BREAST CANCER; CANCER CELL CULTURE; CARBOHYDRATE ANALYSIS; CARBOHYDRATE METABOLISM; COMPARATIVE GLYCOMIC MAPPING; CONTROLLED STUDY; GLYCOBIOLOGY; HUMAN; HUMAN CELL; MATRIX ASSISTED LASER DESORPTION IONIZATION TIME OF FLIGHT MASS SPECTROMETRY; NORMAL VALUE; QUANTITATIVE ANALYSIS; REPRODUCIBILITY; SERUM;

BREAST NEOPLASMS; FEMALE; HUMANS; ISOTOPE LABELING; METHYLATION; POLYSACCHARIDES; SPECTROMETRY, MASS, MATRIX-ASSISTED LASER DESORPTION-IONIZATION;

EID: 34548012656     PISSN: 00032700     EISSN: None     Source Type: Journal    
DOI: 10.1021/ac062098r     Document Type: Article

References (24)

1. Raman, R.; Venkataraman, M.; Ramakrishnan, S.; Lang, W.; Raguram, S.; Sasisekharan, R. Glycobiology 2006, 16, 82R-90R.
2. Paulson, J. C.; Blixt, O.; Collins, B. E. Nat. Chem. Biol. 2006, 2, 238-248.
3. Mrksich, M. Chem. Biol. 2004, 11, 739-740.
4. Ciucanu, I.; Costello, C. E. J. Am. Chem. Soc. 2003, 125, 16213-16219.
5. Mechref, Y.; Novotny, M. V. Chem. Rev. 2002, 102, 2693-2724.
6. Ciucanu, I.; Kerek, F. Carbohydr. Res. 1984, 131, 209-217.
7. Ciucanu, I.; Konig, W. J. Chromatogr., A 1994, 685, 166-171.
8. Ciucanu, I.; Luca, C. Carbohydr. Res. 1990, 206, 731-734.
9. Ciucanu, I.; Gabris, P. Chromatographia 1987, 23, 574-578.
10. Ciucanu, I.; Kerek, F. J. Chromatogr. 1984, 286, 179-185.
11. Hakomori, S.-I. J. Biochem. 1964, 55, 205-208.
12. Kang, P.; Mechref, Y.; Klouckova, I.; Novotny, M. V. Rapid Commun. Mass Spectrom. 2005, 19, 3421-3428.
13. Huang, Y.; Konse, T.; Mechref, Y.; Novotny, M. V. Rapid Commun. Mass Spectrom. 2002, 16, 1199-1204.
14. Huang, Y.; Mechref, Y.; Novotny, M. V. Anal. Chem. 2001, 73, 6063-6069.
15. Mechref, Y.; Novotny, M. V. Anal. Chem. 1998, 70, 455-463.
16. Mechref, Y.; Kang, P.; Novotny, M. V. Rapid Commun. Mass Spectrom. 2006, 20, 1381-1389.
17. Mechref, Y.; Novotny, M. V.; Kirshnan, C. Anal. Chem. 2003, 75, 4895-4903.
18. Dennis, J. W.; Granovsky, M.; Warren, C. E. Bioassays 1999, 21, 412-421.
19. Lowe, J. B.; Marth, J. D. Ann. Rev. Biochem. 2003, 72, 643-691.
20. Hakomori, S.-I. Cancer Res. 1996, 56, 5309-5318.
21. Kobata, A. Glycoconjugate J. 1998, 15, 323-331.
22. Kirmiz, C.; Li, B.; An, H. J.; Clowers, B. H.; Chew, H. K.; Lam, K. S.; Ferrige, A.; Alecio, R.; Borowsky, A. D.; Sulaimon, S.; Lebrilla, C. B.; Miyamoto, S. Mol. Cell Proteomics. 2007, 6, 43-55.
23. Kyselova, Z.; Mechref, Y.; Kang, P.; Goetz, J. A.; Dobrolecki, L. E.; Hickey, R. J.; Malkas, L. H.; Novotny, M. V. Clin. Chem. In press.
24. Kyselova, Z.; Mechref, Y.; Al Bataineh, M. M.; Dobrolecki, L. E.; Hickey, R. J.; Vinson, J.; Sweeney, C. J.; Novotny, M. V. J. Proteome Res. 2007, 6, 1822-1832.