메뉴 건너뛰기




Volumn 5462 LNBI, Issue , 2009, Pages 67-78

Identifying evolutionarily conserved protein interaction modules using graphhopper

Author keywords

[No Author keywords available]

Indexed keywords

CONSERVED PROTEINS; EVOLUTIONARY CONSERVATIONS; GLOBAL MAP; NERVOUS SYSTEM; NOVEL ALGORITHM; ORTHOLOGY; PROTEIN-INTERACTION MODULES; PROTEIN-PROTEIN INTERACTION NETWORKS; TWO-STATE;

EID: 68249117369     PISSN: 03029743     EISSN: 16113349     Source Type: Book Series    
DOI: 10.1007/978-3-642-00727-9_9     Document Type: Conference Paper
Times cited : (4)

References (20)
  • 1
    • 33645732240 scopus 로고    scopus 로고
    • Modeling cellular machinery through biological network comparison
    • Sharan, R., Ideker, T.: Modeling cellular machinery through biological network comparison. Nat. Biotechnol. 24(4), 427-433 (2006)
    • (2006) Nat. Biotechnol. , vol.24 , Issue.4 , pp. 427-433
    • Sharan, R.1    Ideker, T.2
  • 2
    • 0141593601 scopus 로고    scopus 로고
    • Conserved pathways within bacteria and yeast as revealed by global protein network alignment
    • USA
    • Kelley, B.P., Sharan, R., Karp, R.M., Sittler, T., Root, D.E., Stockwell, B.R., Ideker, T.: Conserved pathways within bacteria and yeast as revealed by global protein network alignment. Proc. Natl. Acad. Sci. U S A 100(20), 11394-11399 (2003)
    • (2003) Proc. Natl. Acad. Sci. , vol.100 , Issue.20 , pp. 11394-11399
    • Kelley, B.P.1    Sharan, R.2    Karp, R.M.3    Sittler, T.4    Root, D.E.5    Stockwell, B.R.6    Ideker, T.7
  • 6
    • 34548755675 scopus 로고    scopus 로고
    • Comparing protein interaction networks via a graph match-and-split algorithm
    • Narayanan, M., Karp, R.M.: Comparing Protein Interaction Networks via a Graph Match-and-Split Algorithm. J. Comput. Biol. 14(7), 892-907 (2007)
    • (2007) J. Comput. Biol. , vol.14 , Issue.7 , pp. 892-907
    • Narayanan, M.1    Karp, R.M.2
  • 7
  • 8
    • 33644617753 scopus 로고    scopus 로고
    • Analysis of the human protein interactome and com© Springer-Verlag Berlin Heidelberg 2009.son with yeast worm and fly interaction datasets
    • Gandhi, T.K., et al.: Analysis of the human protein interactome and com© Springer-Verlag Berlin Heidelberg 2009.son with yeast, worm and fly interaction datasets. Nat. Genet. 38(3), 285-293 (2006)
    • (2006) Nat. Genet. , vol.38 , Issue.3 , pp. 285-293
    • Gandhi, T.K.1
  • 11
    • 0037447257 scopus 로고    scopus 로고
    • Assessing experimentally derived interactions in a small world
    • USA
    • Goldberg, D.S., Roth, F.P.: Assessing experimentally derived interactions in a small world. Proc. Natl. Acad Sci. U S A 100(8), 4372-4376 (2003)
    • (2003) Proc. Natl. Acad Sci. , vol.100 , Issue.8 , pp. 4372-4376
    • Goldberg, D.S.1    Roth, F.P.2
  • 12
    • 25144516911 scopus 로고    scopus 로고
    • Consolidating the set of known human protein-protein interactions in preparation for large-scale mapping of the human interactome
    • Ramani, A.K., Bunescu, R.C., Mooney, R.J., Marcotte, E.M.: Consolidating the set of known human protein-protein interactions in preparation for large-scale mapping of the human interactome. Genome Biol. 6(5), R40 (2005)
    • (2005) Genome Biol. , vol.6 , Issue.5
    • Ramani, A.K.1    Bunescu, R.C.2    Mooney, R.J.3    Marcotte, E.M.4
  • 13
    • 25144498379 scopus 로고    scopus 로고
    • A human protein-protein interaction network: A resource for annotating the proteome
    • Stelzl, U., et al.: A human protein-protein interaction network: a resource for annotating the proteome. Cell 122(6), 957-968 (2005)
    • (2005) Cell , vol.122 , Issue.6 , pp. 957-968
    • Stelzl, U.1
  • 14
    • 27144530248 scopus 로고    scopus 로고
    • Towards a proteome-scale map of the human protein-protein interaction network
    • Rual, J., et al.: Towards a proteome-scale map of the human protein-protein interaction network. Nature 437(7062), 1173-1178 (2005)
    • (2005) Nature , vol.437 , Issue.7062 , pp. 1173-1178
    • Rual, J.1
  • 16
    • 0034274870 scopus 로고    scopus 로고
    • An open graph visualization system and its applications to software engineering
    • Gansner, E.R., North, S.C.: An open graph visualization system and its applications to software engineering. Software - Practice and Experience 30(11), 1203-1233 (2000)
    • (2000) Software-Practice and Experience , vol.30 , Issue.11 , pp. 1203-1233
    • Gansner, E.R.1    North, S.C.2
  • 17
    • 0242268551 scopus 로고    scopus 로고
    • Axon guidance mechanisms and molecules: Lessons from invertebrates
    • Araujo, S.J., Tear, G.: Axon guidance mechanisms and molecules: lessons from invertebrates. Nat. Rev. Neurosci. 4(11), 910-922 (2003)
    • (2003) Nat. Rev. Neurosci. , vol.4 , Issue.11 , pp. 910-922
    • Araujo, S.J.1    Tear, G.2
  • 18
    • 0345600247 scopus 로고    scopus 로고
    • A protein interaction map of drosophila melanogaster
    • Giot, L., et al.: A protein interaction map of drosophila melanogaster. Science 302(5651), 1727-1736 (2003)
    • (2003) Science , vol.302 , Issue.5651 , pp. 1727-1736
    • Giot, L.1
  • 19
    • 10744224197 scopus 로고    scopus 로고
    • Development of human protein reference database as an initial platform for approaching systems biology in humans
    • Peri, S., et al.: Development of human protein reference database as an initial platform for approaching systems biology in humans. Genome Res. 13(10), 2363-2371 (2003)
    • (2003) Genome Res. , vol.13 , Issue.10 , pp. 2363-2371
    • Peri, S.1
  • 20
    • 33748257786 scopus 로고    scopus 로고
    • Graemlin: General and robust alignment of multiple large interaction networks
    • Flannick, J., Novak, A., Srinivasan, B.S., McAdams, H.H., Batzoglou, S.: Graemlin: general and robust alignment of multiple large interaction networks. Genome Res. 16(9), 1169-1181 (2006)
    • (2006) Genome Res. , vol.16 , Issue.9 , pp. 1169-1181
    • Flannick, J.1    Novak, A.2    Srinivasan, B.S.3    McAdams, H.H.4    Batzoglou, S.5


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.