-
1
-
-
0034702972
-
Interaction of sigma70 with Escherichia coli RNA polymerase core enzyme studied by surface plasmon resonance
-
Ferguson AL, Hughes AD, Tufail U, Baumann CG, Scott DJ, et al. (2000) Interaction of sigma70 with Escherichia coli RNA polymerase core enzyme studied by surface plasmon resonance. FEBS Lett 481: 281-284.
-
(2000)
FEBS Lett
, vol.481
, pp. 281-284
-
-
Ferguson, A.L.1
Hughes, A.D.2
Tufail, U.3
Baumann, C.G.4
Scott, D.J.5
-
2
-
-
14644422292
-
A multiwell assay to isolate compounds inhibiting the assembly of the prokaryotic RNA polymerase
-
André E, Bastide L, Villain-Guillot P, Latouche J, Rouby J, et al. (2004) A multiwell assay to isolate compounds inhibiting the assembly of the prokaryotic RNA polymerase. Assay Drug Dev Technol 2: 629-635.
-
(2004)
Assay Drug Dev Technol
, vol.2
, pp. 629-635
-
-
André, E.1
Bastide, L.2
Villain-Guillot, P.3
Latouche, J.4
Rouby, J.5
-
3
-
-
0034666279
-
Competition among seven Escherichia coli sigma subunits: Relative binding affinities to the core RNA polymerase
-
Maeda H, Fujita N, Ishihama A (2000) Competition among seven Escherichia coli sigma subunits: relative binding affinities to the core RNA polymerase. Nucleic Acids Res 28: 3497-3503.
-
(2000)
Nucleic Acids Res
, vol.28
, pp. 3497-3503
-
-
Maeda, H.1
Fujita, N.2
Ishihama, A.3
-
4
-
-
0030612603
-
A sigma32 mutant with a single amino acid change in the highly conserved region 2.2 exhibits reduced core RNA polymerase affinity
-
Joo DM, Ng N, Calendar R (1997) A sigma32 mutant with a single amino acid change in the highly conserved region 2.2 exhibits reduced core RNA polymerase affinity. Proc Natl Acad Sci U S A 94: 4907-4912.
-
(1997)
Proc Natl Acad Sci U S A
, vol.94
, pp. 4907-4912
-
-
Joo, D.M.1
Ng, N.2
Calendar, R.3
-
5
-
-
0025744584
-
Escherichia coli sigma70 and NusA proteins. I. Binding interactions with core RNA polymerase in solution and within the transcription complex
-
Gill SC, Weitzel SE, von Hippel PH (1991) Escherichia coli sigma70 and NusA proteins. I. Binding interactions with core RNA polymerase in solution and within the transcription complex. J Mol Biol 220: 307-324.
-
(1991)
J Mol Biol
, vol.220
, pp. 307-324
-
-
Gill, S.C.1
Weitzel, S.E.2
von Hippel, P.H.3
-
6
-
-
0017163866
-
Conformational transition of Escherichia coli RNA polymerase induced by the interaction of sigma subunit with core enzyme
-
Wu FY, Yarbrough LR, Wu CW (1976) Conformational transition of Escherichia coli RNA polymerase induced by the interaction of sigma subunit with core enzyme. Biochemistry 15: 3254-3258.
-
(1976)
Biochemistry
, vol.15
, pp. 3254-3258
-
-
Wu, F.Y.1
Yarbrough, L.R.2
Wu, C.W.3
-
8
-
-
0034807765
-
Luminescence resonance energy transfer analysis of RNA polymerase complexes
-
Heyduk T (2001) Luminescence resonance energy transfer analysis of RNA polymerase complexes. Methods 25: 44-53.
-
(2001)
Methods
, vol.25
, pp. 44-53
-
-
Heyduk, T.1
-
9
-
-
0036669824
-
Measuring protein conformational changes by FRET/LRET
-
Heyduk T (2002) Measuring protein conformational changes by FRET/LRET. Curr Opin Biotechnol 13: 292.
-
(2002)
Curr Opin Biotechnol
, vol.13
, pp. 292
-
-
Heyduk, T.1
-
10
-
-
0035253735
-
Luminescence energy transfer with lanthanide chelates: Interpretation of sensitized acceptor decay amplitudes
-
Heyduk T, Heyduk E (2001) Luminescence energy transfer with lanthanide chelates: interpretation of sensitized acceptor decay amplitudes. Anal Biochem 289: 60-67.
-
(2001)
Anal Biochem
, vol.289
, pp. 60-67
-
-
Heyduk, T.1
Heyduk, E.2
-
11
-
-
0842322003
-
Fluorescence resonance energy transfer analysis of Escherichia coli RNA polymerase and polymerase-DNA complexes
-
Heyduk T, Niedziela-Majka A (2001) Fluorescence resonance energy transfer analysis of Escherichia coli RNA polymerase and polymerase-DNA complexes. Biopolymers 61: 201-213.
-
(2001)
Biopolymers
, vol.61
, pp. 201-213
-
-
Heyduk, T.1
Niedziela-Majka, A.2
-
12
-
-
0033823060
-
The renaissance of fluorescence resonance energy transfer
-
Selvin PR (2000) The renaissance of fluorescence resonance energy transfer. Nat Struct Biol 7: 730-734.
-
(2000)
Nat Struct Biol
, vol.7
, pp. 730-734
-
-
Selvin, P.R.1
-
13
-
-
68149100967
-
-
Selvin PR (1999) Luminescent lanthanide chelates for improved resonance energy transfer and application to biology. In: Rettig W, Strehmel B, Schrader S, eds (1999) Applied Fluorescence in Chemistry, Biology and Medicine. 1st ed. New York, NY: Springer Verlag. pp 457-487.
-
Selvin PR (1999) Luminescent lanthanide chelates for improved resonance energy transfer and application to biology. In: Rettig W, Strehmel B, Schrader S, eds (1999) Applied Fluorescence in Chemistry, Biology and Medicine. 1st ed. New York, NY: Springer Verlag. pp 457-487.
-
-
-
-
14
-
-
0028913136
-
Fluorescence resonance energy transfer
-
Selvin PR (1995) Fluorescence resonance energy transfer. Methods Enzymol 246: 300-334.
-
(1995)
Methods Enzymol
, vol.246
, pp. 300-334
-
-
Selvin, P.R.1
-
15
-
-
0036085517
-
Principles and biophysical applications of lanthanide-based probes
-
Selvin PR (2002) Principles and biophysical applications of lanthanide-based probes. Annu Rev Biophys Biomol Struct 31: 275-302.
-
(2002)
Annu Rev Biophys Biomol Struct
, vol.31
, pp. 275-302
-
-
Selvin, P.R.1
-
16
-
-
0028077111
-
Luminescence energy transfer using a terbium chelate: Improvements on fluorescence energy transfer
-
Selvin PR, Hearst JE (1994) Luminescence energy transfer using a terbium chelate: improvements on fluorescence energy transfer. Proc Natl Acad Sci U S A 91: 10024-10028.
-
(1994)
Proc Natl Acad Sci U S A
, vol.91
, pp. 10024-10028
-
-
Selvin, P.R.1
Hearst, J.E.2
-
18
-
-
0023918675
-
Structure and function of bacterial sigma factors
-
Helmann JD, Chamberlin MJ (1988) Structure and function of bacterial sigma factors. Annu Rev Biochem 57: 839-872.
-
(1988)
Annu Rev Biochem
, vol.57
, pp. 839-872
-
-
Helmann, J.D.1
Chamberlin, M.J.2
-
20
-
-
0038231803
-
Expression, purification of, and monoclonal antibodies to sigma factors from Escherichia coli
-
Anthony LC, Foley KM, Thompson NE, Burgess RR (2003) Expression, purification of, and monoclonal antibodies to sigma factors from Escherichia coli. Methods Enzymol 370: 181-192.
-
(2003)
Methods Enzymol
, vol.370
, pp. 181-192
-
-
Anthony, L.C.1
Foley, K.M.2
Thompson, N.E.3
Burgess, R.R.4
-
21
-
-
25844499174
-
Response of RNA polymerase to ppGpp: Requirement for the omega subunit and relief of this requirement by DksA
-
Vrentas CE, Gaal T, Ross W, Ebright RH, Gourse RL (2005) Response of RNA polymerase to ppGpp: requirement for the omega subunit and relief of this requirement by DksA. Genes Dev 19: 2378-2387.
-
(2005)
Genes Dev
, vol.19
, pp. 2378-2387
-
-
Vrentas, C.E.1
Gaal, T.2
Ross, W.3
Ebright, R.H.4
Gourse, R.L.5
-
22
-
-
0016748261
-
A procedure for the rapid, large-scale purification of Escherichia coli DNA-dependent RNA polymerase involving Polymin P precipitation and DNA-cellulose chromatography
-
Burgess RR, Jendrisak JJ (1975) A procedure for the rapid, large-scale purification of Escherichia coli DNA-dependent RNA polymerase involving Polymin P precipitation and DNA-cellulose chromatography. Biochemistry 14: 4634-4638.
-
(1975)
Biochemistry
, vol.14
, pp. 4634-4638
-
-
Burgess, R.R.1
Jendrisak, J.J.2
-
23
-
-
0037532746
-
A fast Western blot procedure improved for quantitative analysis by direct fluorescence labeling of primary antibodies
-
Bergendahl V, Glaser BT, Burgess RR (2003) A fast Western blot procedure improved for quantitative analysis by direct fluorescence labeling of primary antibodies. J Immunol Methods 277: 117-125.
-
(2003)
J Immunol Methods
, vol.277
, pp. 117-125
-
-
Bergendahl, V.1
Glaser, B.T.2
Burgess, R.R.3
-
24
-
-
0346120329
-
Studying sigma-core interactions in Escherichia coli RNA polymerase by electrophoretic shift assays and luminescence resonance energy transfer
-
Bergendahl V, Burgess RR (2003) Studying sigma-core interactions in Escherichia coli RNA polymerase by electrophoretic shift assays and luminescence resonance energy transfer. Methods Enzymol 370: 192-205.
-
(2003)
Methods Enzymol
, vol.370
, pp. 192-205
-
-
Bergendahl, V.1
Burgess, R.R.2
-
25
-
-
33747153584
-
Time-resolved fluorescence resonance energy transfer kinase assays using physiological protein substrates: Applications of terbium-fluorescein and terbium-green fluorescent protein fluorescence resonance energy transfer pairs
-
Riddle SM, Vedvik KL, Hanson GT, Vogel KW (2006) Time-resolved fluorescence resonance energy transfer kinase assays using physiological protein substrates: applications of terbium-fluorescein and terbium-green fluorescent protein fluorescence resonance energy transfer pairs. Anal Biochem 356: 108-116.
-
(2006)
Anal Biochem
, vol.356
, pp. 108-116
-
-
Riddle, S.M.1
Vedvik, K.L.2
Hanson, G.T.3
Vogel, K.W.4
-
26
-
-
0020262656
-
Ion effects on the aggregation and DNA-binding reactions of Escherichia coli RNA polymerase
-
Shaner SL, Melancon P, Lee KS, Burgess RR, Record MT Jr (1983) Ion effects on the aggregation and DNA-binding reactions of Escherichia coli RNA polymerase. Cold Spring Harb Symp Quant Biol 47 Pt 1: 463-472.
-
(1983)
Cold Spring Harb Symp Quant Biol
, vol.47
, Issue.PART 1
, pp. 463-472
-
-
Shaner, S.L.1
Melancon, P.2
Lee, K.S.3
Burgess, R.R.4
Record Jr, M.T.5
-
27
-
-
0020460847
-
Aggregation equilibria of Escherichia coli RNA polymerase: Evidence for anion-linked conformational transitions in the protomers of core and holoenzyme
-
Shaner SL, Piatt DM, Wensley CG, Yu H, Burgess RR, et al. (1982) Aggregation equilibria of Escherichia coli RNA polymerase: evidence for anion-linked conformational transitions in the protomers of core and holoenzyme. Biochemistry 21: 5539-5551.
-
(1982)
Biochemistry
, vol.21
, pp. 5539-5551
-
-
Shaner, S.L.1
Piatt, D.M.2
Wensley, C.G.3
Yu, H.4
Burgess, R.R.5
-
28
-
-
0023956072
-
Rapid response to osmotic upshift by osmoregulated genes in Escherichia coli and Salmonella typhimurium
-
Jovanovich SB, Martinell M, Record MT Jr, Burgess RR (1988) Rapid response to osmotic upshift by osmoregulated genes in Escherichia coli and Salmonella typhimurium. J Bacteriol 170: 534-539.
-
(1988)
J Bacteriol
, vol.170
, pp. 534-539
-
-
Jovanovich, S.B.1
Martinell, M.2
Record Jr, M.T.3
Burgess, R.R.4
-
29
-
-
0023219316
-
Replacement of potassium chloride by potassium glutamate dramatically enhances protein-DNA interactions in vitro
-
Leirmo S, Harrison C, Cayley DS, Burgess RR, Record MT Jr (1987) Replacement of potassium chloride by potassium glutamate dramatically enhances protein-DNA interactions in vitro. Biochemistry 26: 2095-2101.
-
(1987)
Biochemistry
, vol.26
, pp. 2095-2101
-
-
Leirmo, S.1
Harrison, C.2
Cayley, D.S.3
Burgess, R.R.4
Record Jr, M.T.5
-
30
-
-
0035075383
-
How sigma docks to RNA polymerase and what sigma does
-
Burgess RR, Anthony L (2001) How sigma docks to RNA polymerase and what sigma does. Curr Opin Microbiol 4: 126-131.
-
(2001)
Curr Opin Microbiol
, vol.4
, pp. 126-131
-
-
Burgess, R.R.1
Anthony, L.2
-
31
-
-
0344837844
-
Luminescence resonance energy transfer-based high-throughput screening assay for inhibitors of essential protein-protein interactions in bacterial RNA polymerase
-
Bergendahl V, Heyduk T, Burgess RR (2003) Luminescence resonance energy transfer-based high-throughput screening assay for inhibitors of essential protein-protein interactions in bacterial RNA polymerase. Appl Environ Microbiol 69: 1492-1498.
-
(2003)
Appl Environ Microbiol
, vol.69
, pp. 1492-1498
-
-
Bergendahl, V.1
Heyduk, T.2
Burgess, R.R.3
-
32
-
-
38049071617
-
LRET-based HTS of a small-compound library for inhibitors of bacterial RNA polymerase
-
Glaser BT, Bergendahl V, Thompson NE, Olson B, Burgess RR (2007) LRET-based HTS of a small-compound library for inhibitors of bacterial RNA polymerase. Assay Drug Dev Technol 5: 759-768.
-
(2007)
Assay Drug Dev Technol
, vol.5
, pp. 759-768
-
-
Glaser, B.T.1
Bergendahl, V.2
Thompson, N.E.3
Olson, B.4
Burgess, R.R.5
-
33
-
-
0037071844
-
Crystal structure of a bacterial RNA polymerase holoenzyme at 2.6 A resolution
-
Vassylyev DG, Sekine S, Laptenko O, Lee J, Vassylyeva MN, et al. (2002) Crystal structure of a bacterial RNA polymerase holoenzyme at 2.6 A resolution. Nature 417: 712-719.
-
(2002)
Nature
, vol.417
, pp. 712-719
-
-
Vassylyev, D.G.1
Sekine, S.2
Laptenko, O.3
Lee, J.4
Vassylyeva, M.N.5
-
34
-
-
0344011547
-
Tethering sigma70 to RNA polymerase reveals high in vivo activity of sigma factors and sigma70-dependent pausing at promoter-distal locations
-
Mooney RA, Landick R (2003) Tethering sigma70 to RNA polymerase reveals high in vivo activity of sigma factors and sigma70-dependent pausing at promoter-distal locations. Genes Dev 17: 2839-2851.
-
(2003)
Genes Dev
, vol.17
, pp. 2839-2851
-
-
Mooney, R.A.1
Landick, R.2
-
35
-
-
33645771210
-
Insights into transcriptional regulation and sigma competition from an equilibrium model of RNA polymerase binding to DNA
-
Grigorova IL, Phleger NJ, Mutalik VK, Gross CA (2006) Insights into transcriptional regulation and sigma competition from an equilibrium model of RNA polymerase binding to DNA. Proc Natl Acad Sci U S A 103: 5332-5337.
-
(2006)
Proc Natl Acad Sci U S A
, vol.103
, pp. 5332-5337
-
-
Grigorova, I.L.1
Phleger, N.J.2
Mutalik, V.K.3
Gross, C.A.4
|