Intraspecific diversity of Undaria pinnatifida (Harvey) Suringar (Laminariales, Phaeophyta) from Japan, China and Korea, based on the cox1 gene and ITS2 sequences

Fisheries Science

Volumn 75, Issue 2, 2009, Pages 393-400

  Endo, Hirotoshi ^a   Park, Eun Jeong ^a,c   Sato, Youichi ^b   Mizuta, Hiroyuki ^a   Saga, Naotsune ^a  

^a HOKKAIDO UNIVERSITY   (Japan)

^b RIKEN   (Japan)

^c National Fisheries Research and Development Institute (NFRDI)   (South Korea)

Author keywords

Intraspecific diversity; PCR RFLP; Undaria pinnatifida

Indexed keywords

LAMINARIALES; PHAEOPHYCEAE; UNDARIA; UNDARIA PINNATIFIDA;

EID: 67849126821     PISSN: 09199268     EISSN: 14442906     Source Type: Journal    
DOI: 10.1007/s12562-008-0050-4     Document Type: Article

References (22)

1. R Yamanaka K Akiyama 1993 Cultivation and utilization of Undaria pinnatifida (wakame) as food J Appl Phycol 5 249 253
2. J Sato 2005 Foreign situation of seaweed industry-current status and perspectives Jpn J Phycol 53 41 47 (in Japanese)
3. JL Ram ML Ram FF Baidoun 1996 Authentication of canned tuna and bonito by sequence and restriction site analysis of polymerase chain reaction products of mitochondrial DNA J Agric Food Chem 44 2460 2467
4. Y Takashima T Morita M Yamashita 2006 Complete mitochondrial DNA sequence of Atlantic horse mackerel Trachurus trachurus and molecular identification of two commercially important species T. trachurus and T. japonicus using PCR-RFLP Fish Sci 72 1054 1065
5. K Sezaki S Itoi S Watabe 2005 A simple method to distinguish two commercially valuable eel species in Japan Anguilla japonica and A. anguilla using polymerase chain reaction strategy with a species-specific primer Fish Sci 71 414 421
6. D Muraoka K Saitoh 2005 Identification of Undaria pinnatifida and Undaria undarioides Laminariales, Phaeophyceae using mitochondrial 23S ribosomal DNA sequences Fish Sci 71 1365 1369
7. S Uwai S Arai T Morita H Kawai 2007 Genetic distinctness and phylogenetic relation ships among Undaria species (Laminariales, Phaeophyceae) based on mitochondrial cox3 gene sequences Phycol Res 55 263 271
8. S Uwai W Nelson K Neill WD Wang LE Aguilar-Rosas SM Boo T Kitayama H Kawai 2006 Genetic diversity in Undaria pinnatifida (Laminariales, Phaeophyceae) deduced from mitochondria genes-origins and succession of introduced populations Phycologia 45 687 695
9. S Uwai N Yotsukura Y Serisawa D Muraoka M Hiraoka K Kogame 2006 Intraspecific genetic diversity of Undaria pinnatifida in Japan, based on the mitochondrial cox3 gene and the ITS1 of nr DNA Hydrobiologia 553 345 356
10. D Wang X Wang D Li F Wang D Duan 2006 The genetic analysis and germplasm identification of the gametophytes of Undaria pinnatifida (Phaeophyceae) with RAPD method J Appl Phycol 18 801 809
11. N Yotsukura T Denboh T Motomura T Horiguchi AW Coleman T Ichimura 1999 Little divergence in ribosomal DNA internal transcribed spacer-1 and -2 sequences among non-digitate species of Laminaria (Phaeophyceae) from Hokkaido, Japan Phycol Res 47 71 80
12. HS Yoon JY Lee SM Boo D Bhattacharya 2001 Phylogeny of Alariaceae, Laminariaceae, and Lessoniaceae (Phaeophyceae) based on plastid-encoded RuBisCo spacer and nuclear-encoded ITS sequence comparisons Mol Phylogen Evol 21 231 243
13. N Yotsukura T Kawai T Motomura T Ichimura 2002 Tandem 5S ribosomal RNA genes and the spacer region sequences of three Japanese Laminaria species J Appl Phycol 14 233 239
14. N Yotsukura T Kawai S Kawashima H Ebata T Ichimura 2006 Nucleotide sequence diversity of the 5S rDNA spacer in the simple blade kelp genera Laminaria, Cymathaere and Kjellmaniella (Laminariales, Phaeophyceae) from northern Japan Phycol Res 54 269 279
15. WHCF Kooistra WT Stam JL Olsen C van den Hoek 1992 Biogeography of Cladophoropsis membranacea (Chlorophyta) based on comparisons of nuclear rDNA ITS sequences J Phycol 28 660 668
16. FT Bakker JL Olsen WT Stam C van den Hoek 1992 Nuclear ribosomal DNA internal transcribed spacer regions (ITS1 and ITS2) define discrete biogeographic groups in Cladophora albida (Chlorophyta) J Phycol 28 839 845
17. GW Saunders 2005 Applying DNA barcoding to red macroalgae: a preliminary appraisal holds promise for future applications Phil Trans R Soc Lond B Biol Sci 360 1879 1888
18. MJ Baxter HM Crews MJ Dennis I Goodall D Anderson 1997 The determination of the authenticity of wine from its trace element composition Food Chem 60 443 450
19. KA Anderson BA Magnuson ML Tschirgi B Smith 1999 Determining the geographic origin of potatoes with trace metal analysis using statistical and neural network classifiers J Agric Food Chem 47 1568 1575
20. A Yasui K Shindo 2000 Determination of the geographic origin of brown-rice with trace-element composition Bunseki Kagaku 49 405 410 (in Japanese with English abstract)
21. Okoshi K (2006) Determination of geographic origin of the oyster Crassostrea gigas using multi-elemental analysis: applications for oyster culture. In: Fukuda Y, Watabe S, Nakamura K (eds) Technologies for species and origin identification of fisheries products. Kouseishakouseikaku, Tokyo, pp 128-138
22. M Yamada K Yamamoto Y Ushihara H Kawai 2007 Variation in metal concentrations in the brown alga Undaria pinnatifida in Osaka Bay, Japan Phycol Res 55 222 230