Nucleotide sequence diversity of the 5S rDNA spacer in the simple blade kelp genera Laminaria, Cymathaere and Kjellmaniella (Laminariales, Phaeophyceae) from northern Japan

Phycological Research

Volumn 54, Issue 4, 2006, Pages 269-279

  Yotsukura, Norishige ^a   Kawai, Tadashi ^b   Kawashima, Shoji ^c   Ebata, Hiroki ^d   Ichimura, Terunobu ^a  

^a HOKKAIDO UNIVERSITY   (Japan)

^b Hokkaido Nuclear Energy Environmental Research Center   (Japan)

^c Fuyo Ocean Development and Engineering ^*  (Japan)

^d Fuyo Ocean Development and Engineering Co Ltd   (Japan)

Author keywords

5S rDNA spacer; Cymathaere; Kjellmaniella; Laminaria; Molecular diversity; Speciation

Indexed keywords

DNA FINGERPRINTING; GENE FLOW; LIFE HISTORY; PHYLOGENETICS; SEAWEED; SPECIATION (BIOLOGY);

ASIA; EURASIA; FAR EAST; JAPAN;

CYMATHAERE; CYMATHAERE JAPONICA; KJELLMANIELLA; KJELLMANIELLA CRASSIFOLIA; KJELLMANIELLA GYRATA; LAMINARIA; LAMINARIA ANGUSTATA; LAMINARIA CICHORIOIDES; LAMINARIA CORIACEA; LAMINARIA DIABOLICA; LAMINARIA JAPONICA; LAMINARIA LONGIPEDALIS; LAMINARIA LONGISSIMA; LAMINARIA OCHOTENSIS; LAMINARIA RELIGIOSA; LAMINARIA YENDOANA; LAMINARIALES; PHAEOPHYCEAE;

EID: 33751243306     PISSN: 13220829     EISSN: 14401835     Source Type: Journal    
DOI: 10.1111/j.1440-1835.2006.00434.x     Document Type: Article

References (32)

1. Denboh, T., Ichimura, T., Hendrayanti, D. and Coleman, A. W. 2003. Closterium moniliferum-ehrenbergii (Charophyceae, Chlorophyta) species complex viewed from the 1506 group I intron and ITS2 of nuclear rDNA. J. Phycol. 39: 960-77.
2. Druehl, L. 2000. Pacific Seaweeds. A Guide to Common Seaweeds of the West Coast. Harbour Publishing, BC Canada.
3. Druehl, L., Foottit, R. G. and Masuda, M. 1988. Morphological affinities of Japanese species of Laminaria (Phaeophyta). Phycologia 27: 405-12.
4. Funano, T. 1978. Crossing experiments between several species of Laminaria in Hokkaido. Hokusuishi-Geppo 35: 23-42 (in Japanese).
5. Funano, T. 1980. Crossing experiments between several species of Laminaria in Hokkaido (2). Hokusuishi-Geppo 37: 181-207 (in Japanese).
6. Funano, T. 1983. Speciation and breeding of economic Kombu (Laminaria) in Hokkaido. Fish Genet. Breed. Sci. 8: 54-62 (in Japanese).
7. Funano, T. 1984. Peculiarity and speciation of economic Kombu (Laminaria) in Hokkaido. Suisanseibutsuidenshigenkenkyukyogikai-hokokusyo 1. Kaisourui 37-48. Japan Fisheries Resource Conservation Association (in Japanese).
8. Funano, T. 1991. Morphological and ecological comparisons of Laminaria religiosa, a survival variation of L. japonica and that of L. ochotensis from Oshoro, Sutts and Atsuta. Suisanzoshoku 39: 91-5 (in Japanese).
9. Hasegawa, Y. 1967. Survey Data on Artificial Reef Construction (the First Record of Force Cultivation of Kombu). Hokkaido Development Bureau, Hokkaido (in Japanese).
10. Kawashima, S. 1987. Taxonomic and distributional remarks on the laminariaceous algae (Laminariales, Phaeophyceae) of Japan-7: Morphology of sporophyte (5). Aquabiology 51: 284-7 (in Japanese).
11. Kawashima, S. 1989a. Illustration Book of Japanese Laminariales. Kitanihon-kaiyo center, Sapporo (in Japanese).
12. Kawashima, S. 1989b. Taxonomic and distributional remarks on the laminariaceous algae (Laminariales, Phaeophyceae) of Japan-21: Laminariaceae (2). Aquabiology 65: 484-7 (in Japanese).
13. Kawashima, S. 1993. Taxonomic and distributional remarks on the laminariaceous algae (Laminariales, Phaeophyceae) of Japan-43: Laminariaceae-Laminaria (22)-Laminaria ochotensis (4). Aquabiology 87: 245-8 (in Japanese).
14. Kawashima, S. 2000. Taxonomic and distributional remarks on the laminariaceous algae (Laminariales, Phaeophyceae) of Japan-80: Laminariaceae-Laminaria (59)-Laminaria saccharina (4). Aquabiology 129: 367-74 (in Japanese).
15. Miyabe, K. 1902. Laminariaceae. Hokkaido Suisan Chosahokoku, Vol. 3. Hokkaido Shokuminbu, pp. 1-60 (in Japanese).
16. Nabata, S., Abe, E. and Kakiuchi, M. 1993. Ecological study and transplanting experiment of the biennial plants of Laminaria on the coast of Isoya, Suttu, southernwestern Hokkaido. Jpn. Sci. Rep. Hokkaido Fish. Exp. St. 43: 25-35.
17. Ohi, T., Wakabayashi, M., Wu, S. and Murata, J. 2003. Phylogeography of Stachyurus praecox (Stachyuraceae) in the Japanese archipelago based on chloroplast DNA haplotypes. J. Jpn. Bot. 78: 1-14.
18. Okamura, K. 1896. On Laminaria of Japan. Bot. Mag. Tokyo 10: 87-99.
19. Posada, D. and Crandall, K. A. 1998. Modeltest: testing the model of DNA substitution. Bioinformatics 14: 817-18.
20. Sanbonsuga, Y. 1978. On the morphological characteristics of Laminaria japonica var. japonica studied by transplanting experiment. II. On the varieties of Laminaria japonica var. japonica Aresch. Bull. Hokkaido Reg. Fish. Res. Lab. 43: 79-88.
21. Sanbonsuga, Y. and Torii, S. 1973. On the morphological characteristics of Laminaria japonica var. japonica studied by transplanting experiment. I. On local forms of Laminaria japonica var. japonica. Bull. Hokkaido Reg. Fish. Res. Lab. 39: 61-82.
22. Sanbonsuga, Y. and Torii, S. 1974. On the local variation of morphological characteristics in Laminaria japonica Areschoug var. japonica. Bull. Hokkaido Reg. Fish. Res. Lab. 40: 48-59.
23. Soltis, D. E. and Soltis, P. S. 1999. Choosing an approach and an appropriate gene for phylogenetic analysis. In Soltis, P. S., Soltis, D. E. and Doyle, J. J. (Eds) Molecular Systematics of Plants II, DNA Sequencing. Kluwer. Academic Publishing, Massachusetts, pp. 1-42.
24. Swofford, D. L. 2000. Paup*: Phylogenetic Analysis Using Parsimony (and Other Methods), Version 4. Sinauer Associates, Sunderland, MA.
25. Thompson, J. D., Higgins, D. J. and Gibson, T. J. 1994. CLUSTAL W: improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position specific gap penalties and weight matrix choice. Nucleic Acids Res. 22: 425-30.
26. Wegener, A. 1915. Die Entstehung Der Kontinente Und Ozeane. Vieweg, Braunschweig (in German).
27. Yabu, H. 1964. Early development of several species of Laminariales in Hokkaido. Mem. Fac. Fish. Hokkaido Univ. 12: 1-72.
28. Yoon, H. S., Lee, J. Y., Boo, S. M. and Bhattacharya, D. 2001. Phylogeny of Alariaceae, Laminariaceae, and Lessoniaceae (Phaeophyceae) based on plastid-encoded RuBisCo spacer and nuclear-encoded ITS sequence comparisons. Mol. Phylogenet. Evol. 21: 231-43.
29. Yoshida, T., Yoshinaga, K. and Nakajima, Y. 2000. Check list of marine algae of Japan (Revised in 2000). Jpn. J. Phycol. 48: 113-66 (in Japanese).
30. Yotsukura, N., Denboh, T., Motomura, T., Horiguchi, T., Coleman, A. W. and Ichimura, T. 1999. Little divergence in ribosomal DNA internal transcribed spacer -1 and -2 sequences among non-digitate species of Laminaria (Phaeophyceae) from Hokkaido. Jpn. Phycol. Res. 47: 71-80.
31. Yotsukura, N., Kawai, T., Motomura, T. and Ichimura, T. 2001. Random amplified polymorphic DNA markers for three Japanese laminarian species. Fish Sci. 67: 857-86.
32. Yotsukura, N., Kawai, T., Motomura, T. and Ichimura, T. 2002. Tandem 5S ribosomal RNA genes and the spacer region sequences of three Japanese Laminaria species. J. Appl. Phycol. 14: 233-9.