Role of mutation in Pseudomonas aeruginosa biofilm development

PLoS ONE

Volumn 4, Issue 7, 2009, Pages

  Conibear, Tim C R ^a   Collins, Samuel L ^a   Webb, Jeremy S ^a  

^a UNIVERSITY OF SOUTHAMPTON   (United Kingdom)

Author keywords

[No Author keywords available]

Indexed keywords

GREEN FLUORESCENT PROTEIN; PRIMER DNA;

ARTICLE; BACTERIAL CELL; BACTERIAL GROWTH; BACTERIAL MUTATION; BACTERIAL STRAIN; BACTERIAL SURVIVAL; BACTERIOPLANKTON; BACTERIUM COLONY; BACTERIUM CULTURE; BASE MISPAIRING; BIOFILM; CELL PROLIFERATION; CELL TRANSFORMATION; CONTROLLED STUDY; DNA REPAIR; GROWTH INHIBITION; MUTAGENICITY; MUTATION RATE; NONHUMAN; PHENOTYPE; PSEUDOMONAS AERUGINOSA; BACTERIAL GENE; CONFOCAL MICROSCOPY; CULTURE MEDIUM; FRAMESHIFT MUTATION; GENETICS; GROWTH, DEVELOPMENT AND AGING; NUCLEOTIDE SEQUENCE;

BACTERIA (MICROORGANISMS); PSEUDOMONAS AERUGINOSA;

BASE SEQUENCE; BIOFILMS; CULTURE MEDIA; DNA PRIMERS; FRAMESHIFT MUTATION; GENES, BACTERIAL; GREEN FLUORESCENT PROTEINS; MICROSCOPY, CONFOCAL; PSEUDOMONAS AERUGINOSA;

EID: 67650924526     PISSN: None     EISSN: 19326203     Source Type: Journal    
DOI: 10.1371/journal.pone.0006289     Document Type: Article

References (55)

1. Bielas JH, Loeb KR, Rubin BP, True LD, Loeb LA (2006) Human cancers express a mutator phenotype. Proc Natl Acad Sci U S A 103: 18238-18242.
2. Loeb LA (2001) A mutator phenotype in cancer. Cancer Res 61: 3230-3239.
3. Costerton JW, Lam J, Lam K, Chan R (1983) The role of the microcolony mode of growth in the pathogenesis of Pseudomonas aeruginosa infections. Rev Infect Dis 5 Suppl 5: S867-873.
4. Singh PK, Schaefer AL, Parsek MR, Moninger TO, Welsh MJ, et al. (2000) Quorum-sensing signals indicate that cystic fibrosis lungs are infected with bacterial biofilms. Nature 407: 762-764.
5. Anderson GG, Palermo JJ, Schilling JD, Roth R, Heuser J, et al. (2003) Intracellular bacterial biofilm-like pods in urinary tract infections. Science 301: 105-107.
6. Haagensen JA, Klausen M, Ernst RK, Miller SI, Folkesson A, et al. (2007) Differentiation and distribution of colistin- and sodium dodecyl sulfate-tolerant cells in Pseudomonas aeruginosa biofilms. J Bacteriol 189: 28-37.
7. Klayman BJ, Klapper I, Stewart PS, Camper AK (2008) Measurements of accumulation and displacement at the single cell cluster level in Pseudomonas aeruginosa biofilms. Environ Microbiol 10: 2344-2354.
8. Klausen M, Aaes-Jorgensen A, Molin S, Tolker-Nielsen T (2003) Involvement of bacterial migration in the development of complex multicellular structures in Pseudomonas aeruginosa biofilms. Mol Microbiol 50: 61-68.
9. Klausen M, Heydorn A, Ragas P, Lambertsen L, Aaes-Jorgensen A, et al. (2003) Biofilm formation by Pseudomonas aeruginosa wildtype, flagella, and type IV pili mutants. Mol Microbiol 48: 1511-1524.
10. Oliver A, Canton R, Campo P, Baquero F, Blazquez J (2000) High frequency of hypermutable Pseudomonas aeruginosa in cystic fibrosis lung infection. Science 288: 1251-1254.
11. Driffield K, Miller K, Bostock JM, O'Neill AJ, Chopra I (2008) Increased mutability of Pseudomonas aeruginosa in biofilms. J Antimicrob Chemother 61: 1053-1056.
12. Haussler S, Ziegler I, Lottel A, von Gotz F, Rohde M, et al. (2003) Highly adherent small-colony variants of Pseudomonas aeruginosa in cystic fibrosis lung infection. J Med Microbiol 52: 295-301.
13. D'Argenio DA, Calfee MW, Rainey PB, Pesci EC (2002) Autolysis and autoaggregation in Pseudomonas aeruginosa colony morphology mutants. J Baceriol 184: 6481-6489.
14. Boles BR, Thoendel M, Singh PK (2005) Self-generated diversity produces 'insurance effects' in biofilm communities (vol 101, pg 16630, 2004). Proc Natl Acad Sci U S A 102: 955-955.
15. Drenkard E, Ausubel FM (2002) Pseudomonas biofilm formation and antibiotic resistance are linked to phenotypic variation. Nature 416: 740-743.
16. Webb JS, Lau M, Kjelleberg S (2004) Bacteriophage and phenotypic variation in Pseudomonas aeruginosa biofilm development. J Bacteriol 186: 8066-8073.
17. Denamur E, Matic I (2006) Evolution of mutation rates in bacteria. Mol Microbiol 60: 820-827.
18. Drake JW (2007) Too many mutants with multiple mutations. Crit Rev Biochem Mol Biol 42: 247-258.
19. Lenski RE, Winkworth CL, Riley MA (2003) Rates of DNA sequence evolution in experimental populations of Escherichia coli during 20,000 generations. J Mol Evol 56: 498-508.
20. Sniegowski PD, Gerrish PJ, Lenski RE (1997) Evolution of high mutation rates in experimental populations of E. coli. Nature 387: 703-705.
21. Boles B, Singh P (2008) Endogenous oxidative stress produces diversity and adaptability in biofilm communities. Proceedings of the National Academy of Sciences 105: 12503.
22. Mai-Prochnow A, Lucas-Elio P, Egan S, Thomas T, Webb JS, et al. (2008) Hydrogen peroxide linked to lysine oxidase activity facilitates biofilm differentiation and dispersal in several gram-negative bacteria. J Bacteriol 190: 5493-5501.
23. Allegrucci M, Sauer K (2008) Formation of Streptococcus pneumoniae nonphase-variable colony variants is due to increased mutation frequency present under biofilm growth conditions. J Bacteriol 190: 6330-6339.
24. Sauer K, Camper AK, Ehrlich GD, Costerton JW, Davies DG (2002) Pseudomonas aeruginosa Displays Multiple Phenotypes during Development as a Biofilm. J Bacteriol 184: 1140-1154.
25. Kreft JU (2004) Biofilms promote altruism. Microbiology 150: 2751-2760.
26. Monds RD, O'Toole GA (2009) The developmental model of microbial biofilms: ten years of a paradigm up for review. Trends Microbiol 17: 73-87.
27. Picioreanu C, van Loosdrecht MC, Heijnen JJ (1998) Mathematical modeling of biofilm structure with a hybrid differential-discrete cellular automaton approach. Biotechnol Bioeng 58: 101-116.
28. Calos MP, Miller JH (1981) Genetic and sequence analysis of frameshift mutations induced by ICR-191. J Mol Biol 153: 39-64.
29. Cariello NF, Narayanan S, Kwanyuen P, Muth H, Casey WM (1998) A novel bacterial reversion and forward mutation assay based on green fluorescent protein. Mutat Res 414: 95-105.
30. Hoffman GR, Deschenes SM, Manyin T, Fuchs RP (1996) Mutagenicity of acridines in a reversion assay based on tetracycline resistance in plasmid pBR322 in Escherichia coli. Mutat Res 351: 33-43.
31. Stoodley P, Wilson S, Hall-Stoodley L, Boyle JD, Lappin-Scott HM, et al. (2001) Growth and detachment of cell clusters from mature mixed-species biofilms. Appl Environ Microbiol 67: 5608-5613.
32. Oliver A, Levin BR, Juan C, Baquero F, Blazquez J (2004) Hypermutation and the preexistence of antibiotic-resistant Pseudomonas aeruginosa mutants: implications for susceptibility testing and treatment of chronic infections. Antimicrob Agents Chemother 48: 4226-4233.
33. Blazquez J (2003) Hypermutation as a factor contributing to the acquisition of antimicrobial resistance. Clin Infect Dis 37: 1201-1209.
34. Macia MD, Blanquer D, Togores B, Sauleda J, Perez JL, et al. (2005) Hypermutation is a key factor in development of multiple-antimicrobial resistance in Pseudomonas aeruginosa strains causing chronic lung infections. Antimicrob Agents Chemother 49: 3382-3386.
35. Townsend JP, Nielsen KM, Fisher DS, Hartl DL (2003) Horizontal acquisition of divergent chromosomal DNA in bacteria: effects of mutator phenotypes. Genetics 164: 13-21.
36. Tolker-Nielsen T, Brinch UC, Ragas PC, Andersen JB, Jacobsen CS, et al. (2000) Development and dynamics of Pseudomonas sp. biofilms. J Bacteriol 182: 6482-6489.
37. Webb JS, Thompson LS, James S, Charlton T, Tolker-Nielsen T, et al. (2003) Cell death in Pseudomonas aeruginosa biofilm development. J Bacteriol 185: 4585-4592.
38. Purevdorj-Gage B, Costerton WJ, Stoodley P (2005) Phenotypic differentiation and seeding dispersal in non-mucoid and mucoid Pseudomonas aeruginosa biofilms. Microbiology 151: 1569-1576.
39. Sauer K, Camper AK (2001) Characterization of phenotypic changes in Pseudomonas putida in response to surface-associated growth. J Bacteriol 183: 6579-6589.
40. Smith EE, Buckley DG, Wu Z, Saenphimmachak C, Hoffman LR, et al. (2006) Genetic adaptation by Pseudomonas aeruginosa to the airways of cystic fibrosis patients. Proc Natl Acad Sci U S A 103: 8487-8492.
41. Marnett LJ, Plastaras JP (2001) Endogenous DNA damage and mutation. Trends Genet 17: 214-221.
42. Burcham PC (1999) Internal hazards: baseline DNA damage by endogenous products of normal metabolism. Mutat Res 443: 11-36.
43. Mai-Prochnow A, Lucas-Elio P, Egan S, Thomas T, Webb JS, et al. (2008) Hydrogen peroxide linked to lysine oxidase activity facilitates biofilm differentiation and dispersal in several Gram negative bacteria. J Bacteriol.
44. Barraud N, Hassett DJ, Hwang SH, Rice SA, Kjelleberg S, et al. (2006) Involvement of nitric oxide in biofilm dispersal of Pseudomonas aeruginosa. J Bacteriol 188: 7344-7353.
45. Ciofu O, Riis B, Pressler T, Poulsen HE, Hoiby N (2005) Occurrence of hypermutable Pseudomonas aeruginosa in cystic fibrosis patients is associated with the oxidative stress caused by chronic lung inflammation. Antimicrob Agents Chemother 49: 2276-2282.
46. Merlo LM, Pepper JW, Reid BJ, Maley CC (2006) Cancer as an evolutionary and ecological process. Nat Rev Cancer 6: 924-935.
47. Stover CK, Pham XQ, Erwin AL, Mizoguchi SD, Warrener P, et al. (2000) Complete genome sequence of Pseudomonas aeruginosa PA01, an opportunistic pathogen. Nature 406: 959-964.
48. Lewenza S, Falsafi RK, Winsor G, Gooderham WJ, McPhee JB, et al. (2005) Construction of a mini-Tn5-luxCDABE mutant library in Pseudomonas aeruginosa PAO1: A tool for identifying differentially regulated genes. Genome Res 15: 583-589.
49. West SE, Schweizer HP, Dall C, Sample AK, Runyen-Janecky LJ (1994) Construction of improved Escherichia-Pseudomonas shuttle vectors derived from pUC18/19 and sequence of the region required for their replication in Pseudomonas aeruginosa. Gene 148: 81-86.
50. Nivens DE, Ohman DE, Williams J, Franklin MJ (2001) Role of alginate and its O acetylation in formation of Pseudomonas aeruginosa microcolonies and biofilms. J Bacteriol 183: 1047-1057.
51. Koch B, Jensen LE, Nybroe O (2001) A panel of Tn7-based vectors for insertion of the gfp marker gene or for delivery of cloned DNA into Gram-negative bacteria at a neutral chromosomal site. J Microbiol Methods 45: 187-195.
52. Bachl J, Olsson C (1999) Hypermutation targets a green fluorescent protein-encoding transgene in the presence of immunoglobulin enhancers. Eur J Immunol 29: 1383-1389.
53. Choi KH, Kumar A, Schweizer HP (2006) A 10-min method for preparation of highly electrocompetent Pseudomonas aeruginosa cells: application for DNA fragment transfer between chromosomes and plasmid transformation. J Microbiol Methods 64: 391-397.
54. Moller S, Sternberg C, Andersen JB, Christensen BB, Ramos JL, et al. (1998) In Situ Gene Expression in Mixed-Culture Biofilms: Evidence of Metabolic Interactions between Community Members. Appl Environ Microbiol 64: 721-732.
55. Heydorn A, Nielsen AT, Hentzer M, Sternberg C, Givskov M, et al. (2000) Quantification of biofilm structures by the novel computer program COMSTAT. Microbiology 146: 2395-2407.