-
1
-
-
1842509716
-
Quantifying biofilm structure: Facts and fiction
-
Beyenal, H., Lewandowski, Z. Harkin, G. (2004a) Quantifying biofilm structure: facts and fiction. Biofouling 20 : 1 23.
-
(2004)
Biofouling
, vol.20
, pp. 1-23
-
-
Beyenal, H.1
Lewandowski, Z.2
Harkin, G.3
-
2
-
-
5644285650
-
Three-dimensional biofilm structure quantification
-
Beyenal, H., Donovan, C., Lewandowski, Z. Harkin, G. (2004b) Three-dimensional biofilm structure quantification. J Microbiol Methods 59 : 395 413.
-
(2004)
J Microbiol Methods
, vol.59
, pp. 395-413
-
-
Beyenal, H.1
Donovan, C.2
Lewandowski, Z.3
Harkin, G.4
-
3
-
-
0033735167
-
Simultaneous imaging of Pseudomonas fluorescens WCS365 populations expressing three different autofluorescent proteins in the rhizosphere: New perspectives for studying microbial communities
-
Bloemberg, G.V., Wijfjes, A.H., Lamers, G.E., Stuurman, N. Lugtenberg, B.J. (2000) Simultaneous imaging of Pseudomonas fluorescens WCS365 populations expressing three different autofluorescent proteins in the rhizosphere: new perspectives for studying microbial communities. Mol Plant Microbe Interact 13 : 1170 1176.
-
(2000)
Mol Plant Microbe Interact
, vol.13
, pp. 1170-1176
-
-
Bloemberg, G.V.1
Wijfjes, A.H.2
Lamers, G.E.3
Stuurman, N.4
Lugtenberg, B.J.5
-
4
-
-
9344269395
-
Self-generated diversity produces 'insurance effects' in biofilm communities
-
Boles, B.R., Thoendel, M. Singh, P.K. (2004) Self-generated diversity produces 'insurance effects' in biofilm communities. Proc Natl Acad Sci 101 : 16630 16635.
-
(2004)
Proc Natl Acad Sci
, vol.101
, pp. 16630-16635
-
-
Boles, B.R.1
Thoendel, M.2
Singh, P.K.3
-
5
-
-
3042785070
-
The role of biofilm matrix in structural development
-
Cogan, N. Keener, J.P. (2004) The role of biofilm matrix in structural development. Math Med Biol 21 : 147 166.
-
(2004)
Math Med Biol
, vol.21
, pp. 147-166
-
-
Cogan, N.1
Keener, J.P.2
-
6
-
-
0028037497
-
Direct measurement of chlorine penetration into biofilms during disinfection
-
DeBeer, D., Srinivasan, R. Stewart, P.S. (1994) Direct measurement of chlorine penetration into biofilms during disinfection. Appl Environ Microbiol 60 : 4339 4344.
-
(1994)
Appl Environ Microbiol
, vol.60
, pp. 4339-4344
-
-
Debeer, D.1
Srinivasan, R.2
Stewart, P.S.3
-
7
-
-
0036302101
-
Finger formation in biofilm layers
-
Dockery, J. Klapper, I. (2001) Finger formation in biofilm layers. SIAM J Appl Math 62 : 853 869.
-
(2001)
SIAM J Appl Math
, vol.62
, pp. 853-869
-
-
Dockery, J.1
Klapper, I.2
-
8
-
-
0036945238
-
The influence of fluid shear on the structure and material properties of sulphate-reducing bacterial biofilms
-
Dunsmore, B.C., Jacobsen, A., Hall-Stoodley, L., Bass, C.J., Lappin-Scott, H.M. Stoodley, P. (2002) The influence of fluid shear on the structure and material properties of sulphate-reducing bacterial biofilms. J Ind Microbiol Technol 29 : 347 353.
-
(2002)
J Ind Microbiol Technol
, vol.29
, pp. 347-353
-
-
Dunsmore, B.C.1
Jacobsen, A.2
Hall-Stoodley, L.3
Bass, C.J.4
Lappin-Scott, H.M.5
Stoodley, P.6
-
9
-
-
0035283754
-
How to optimize the drop plate method for enumerating bacteria
-
Herigstad, B., Hamilton, M. Heersink, J. (2001) How to optimize the drop plate method for enumerating bacteria. J Microbiol Methods 44 : 121 129.
-
(2001)
J Microbiol Methods
, vol.44
, pp. 121-129
-
-
Herigstad, B.1
Hamilton, M.2
Heersink, J.3
-
10
-
-
0033764531
-
Quantification of biofilm structures by the novel computer program COMSTAT
-
Heydorn, A., Nielsen, A.T., Hentzer, M., Sternberg, C., Givskov, M., Ersboll, B.K. Molin, S. (2000) Quantification of biofilm structures by the novel computer program COMSTAT. Microbiology UK 146 : 2395 2407.
-
(2000)
Microbiology UK
, vol.146
, pp. 2395-2407
-
-
Heydorn, A.1
Nielsen, A.T.2
Hentzer, M.3
Sternberg, C.4
Givskov, M.5
Ersboll, B.K.6
Molin, S.7
-
11
-
-
0037516681
-
A computer investigation of chemically mediated detachment in bacterial biofilms
-
Hunt, S.M., Hamilton, M.A., Sears, J.T., Harkin, G. Reno, J. (2003) A computer investigation of chemically mediated detachment in bacterial biofilms. Microbiology 149 : 1155 1163.
-
(2003)
Microbiology
, vol.149
, pp. 1155-1163
-
-
Hunt, S.M.1
Hamilton, M.A.2
Sears, J.T.3
Harkin, G.4
Reno, J.5
-
12
-
-
0034551739
-
Antigen 43 facilitates formation of multispecies biofilms
-
Kjaergaard, K., Schembri, M.A., Ramos, C., Molin, S. Klemm, P. (2000) Antigen 43 facilitates formation of multispecies biofilms. Environ Microbiol 2 : 695 702.
-
(2000)
Environ Microbiol
, vol.2
, pp. 695-702
-
-
Kjaergaard, K.1
Schembri, M.A.2
Ramos, C.3
Molin, S.4
Klemm, P.5
-
13
-
-
33748431397
-
Role of cohesion in material description of biofilms
-
Klapper, I. Dockery, J. (2006) Role of cohesion in material description of biofilms. Phys Rev E 74 : 031902.
-
(2006)
Phys Rev e
, vol.74
, pp. 031902
-
-
Klapper, I.1
Dockery, J.2
-
14
-
-
0038375994
-
Biofilm formation by Pseudmonas aeruginosa wild type, flagella and type IV pili mutants
-
Klausen, M., Heydorn, A., Ragas, P., Lambertsen, L., Aaes-Jorgensen, Molin, S. Tolker-Nielsen, T. (2003a) Biofilm formation by Pseudmonas aeruginosa wild type, flagella and type IV pili mutants. Mol Microbiol 48 : 1511 1524.
-
(2003)
Mol Microbiol
, vol.48
, pp. 1511-1524
-
-
Klausen, M.1
Heydorn, A.2
Ragas, P.3
Lambertsen, L.4
Aaes-Jorgensen5
Molin, S.6
Tolker-Nielsen, T.7
-
15
-
-
0038375994
-
Biofilm formation by Pseudmonas aeruginosa wild type, flagella and type IV pili mutants
-
Klausen, M., Heydorn, A., Ragas, P., Lambertsen, L., Aaes-Jorgensen, Molin, S. Tolker-Nielsen, T. (2003b) Biofilm formation by Pseudmonas aeruginosa wild type, flagella and type IV pili mutants. Mol Microbiol 48 : 1511 1524.
-
(2003)
Mol Microbiol
, vol.48
, pp. 1511-1524
-
-
Klausen, M.1
Heydorn, A.2
Ragas, P.3
Lambertsen, L.4
Aaes-Jorgensen5
Molin, S.6
Tolker-Nielsen, T.7
-
16
-
-
11144308980
-
Timing and localization of rhamnolipid synthesis gene expression in Pseudomonas aeruginosa biofilms
-
Lequette, Y. Greenberg, E.P. (2005) Timing and localization of rhamnolipid synthesis gene expression in Pseudomonas aeruginosa biofilms. J Bacteriol 187 : 37 44.
-
(2005)
J Bacteriol
, vol.187
, pp. 37-44
-
-
Lequette, Y.1
Greenberg, E.P.2
-
17
-
-
0028797049
-
Bacterial growth on surfaces: Automated image analysis for quantification of growth rate related parameters
-
Moller, S., Kristensen, C.S., Poulsen, L.K., Carstensen, J.M. Molin, S. (1995) Bacterial growth on surfaces: automated image analysis for quantification of growth rate related parameters. Appl Environ Microbiol 61 : 741 748.
-
(1995)
Appl Environ Microbiol
, vol.61
, pp. 741-748
-
-
Moller, S.1
Kristensen, C.S.2
Poulsen, L.K.3
Carstensen, J.M.4
Molin, S.5
-
18
-
-
32044442967
-
Analysis of a marine phototrophic biofilm by confocal laser scanning microscopy using the new image quantification software PHLIP
-
Mueller, L.N., de Brouwer, J.F., Almeida, J.S., Stal, L.J. Xavier, J.B. (2006) Analysis of a marine phototrophic biofilm by confocal laser scanning microscopy using the new image quantification software PHLIP. BMC Ecol 6 : 1.
-
(2006)
BMC Ecol
, vol.6
, pp. 1
-
-
Mueller, L.N.1
De Brouwer, J.F.2
Almeida, J.S.3
Stal, L.J.4
Xavier, J.B.5
-
19
-
-
0029256477
-
Quantitative analysis of biofilm thickness variability
-
Murga, R., Stewart, P. Daly, D. (1995) Quantitative analysis of biofilm thickness variability. Biotechnol Bioeng 45 : 503 510.
-
(1995)
Biotechnol Bioeng
, vol.45
, pp. 503-510
-
-
Murga, R.1
Stewart, P.2
Daly, D.3
-
20
-
-
0032485575
-
Mathematical modeling of biofilm structure with a hybrid differential discrete cellular automaton approach
-
Picioreanu, C., Van Loosdrecht, M.C.M. Heijnen, J.J. (1998) Mathematical modeling of biofilm structure with a hybrid differential discrete cellular automaton approach. Biotechnol Bioeng 58 : 101 116.
-
(1998)
Biotechnol Bioeng
, vol.58
, pp. 101-116
-
-
Picioreanu, C.1
Van Loosdrecht, M.C.M.2
Heijnen, J.J.3
-
21
-
-
34249707773
-
Microbial motility involvement in biofilm structure formation - A 3D modeling study
-
Picioreanu, C., Kreft, J.U., Klausen, M., Haagensen, J.A.J., Tolker-Nielsen, T.T. Molin, S. (2007) Microbial motility involvement in biofilm structure formation - a 3D modeling study. Water Sci Technol 55 : 337 343.
-
(2007)
Water Sci Technol
, vol.55
, pp. 337-343
-
-
Picioreanu, C.1
Kreft, J.U.2
Klausen, M.3
Haagensen, J.A.J.4
Tolker-Nielsen, T.T.5
Molin, S.6
-
22
-
-
19044394915
-
Phenotypic differentiation and seeding dispersal in non-mucoid and mucoid Pseudomonas aeruginosa biofilms
-
Purevdorj-Gage, B., Costerton, W.J. Stoodley, P. (2005) Phenotypic differentiation and seeding dispersal in non-mucoid and mucoid Pseudomonas aeruginosa biofilms. Microbiology 151 : 1569 1576.
-
(2005)
Microbiology
, vol.151
, pp. 1569-1576
-
-
Purevdorj-Gage, B.1
Costerton, W.J.2
Stoodley, P.3
-
23
-
-
34249794867
-
Spatial patterns of DNA replication, protein synthesis, and oxygen concentration within bacterial biofilms reveal diverse physiological states
-
Rani, S.A., Pitts, B., Beyenal, H., Veluchamy, R.A., Lewandowski, Z., Davison, W.M., et al. (2007) Spatial patterns of DNA replication, protein synthesis, and oxygen concentration within bacterial biofilms reveal diverse physiological states. J Bacteriol 189 : 4223 4233.
-
(2007)
J Bacteriol
, vol.189
, pp. 4223-4233
-
-
Rani, S.A.1
Pitts, B.2
Beyenal, H.3
Veluchamy, R.A.4
Lewandowski, Z.5
Davison, W.M.6
-
24
-
-
0033817313
-
Apparent surface associated lag time in growth of primary biofilm cells
-
Rice, A.R., Hamilton, M.A. Camper, A.K. (2000) Apparent surface associated lag time in growth of primary biofilm cells. Microb Ecol 40 : 8 15.
-
(2000)
Microb Ecol
, vol.40
, pp. 8-15
-
-
Rice, A.R.1
Hamilton, M.A.2
Camper, A.K.3
-
25
-
-
0038777075
-
Movement, replication, and emigration rates of individual bacteria in a biofilm
-
Rice, A.R., Hamilton, M.A. Camper, A.K. (2003) Movement, replication, and emigration rates of individual bacteria in a biofilm. Microb Ecol 45 : 163 172.
-
(2003)
Microb Ecol
, vol.45
, pp. 163-172
-
-
Rice, A.R.1
Hamilton, M.A.2
Camper, A.K.3
-
26
-
-
0346732025
-
Modeling antibiotic tolerance in biofilms by accounting for nutrient limitation
-
Roberts, M.E. Stewart, P.S. (2004) Modeling antibiotic tolerance in biofilms by accounting for nutrient limitation. Antimicrob Agents Chemother 48 : 48 52.
-
(2004)
Antimicrob Agents Chemother
, vol.48
, pp. 48-52
-
-
Roberts, M.E.1
Stewart, P.S.2
-
27
-
-
0032851953
-
Distribution of bacterial growth activity in flow-chamber biofilms
-
Sternberg, C., Christensen, B.B., Johansen, T., Nielsen, A.T., Andersen, J.B., Giskov, M. Molin, S. (1999) Distribution of bacterial growth activity in flow-chamber biofilms. Appl Environ Microbiol 65 : 4108 4117.
-
(1999)
Appl Environ Microbiol
, vol.65
, pp. 4108-4117
-
-
Sternberg, C.1
Christensen, B.B.2
Johansen, T.3
Nielsen, A.T.4
Andersen, J.B.5
Giskov, M.6
Molin, S.7
-
28
-
-
0027439411
-
Quantitative observations of heterogeneities in Pseudomonas aeruginosa biofilms
-
Stewart, P.S., Peyton, B.M., Drury, W.J. Murga, R. (1993) Quantitative observations of heterogeneities in Pseudomonas aeruginosa biofilms. Appl Environ Microbiol 59 : 327 329.
-
(1993)
Appl Environ Microbiol
, vol.59
, pp. 327-329
-
-
Stewart, P.S.1
Peyton, B.M.2
Drury, W.J.3
Murga, R.4
-
29
-
-
0037226597
-
Contributions of antibiotic penetration, oxygen limitation, and low metabolic activity to the tolerance of Pseudomonas aeruginosa biofilms to ciprofloxacin and tobramycin
-
Walters, M.C., Roe, F., Bugnicourt, A., Franklin, M.J. Stewart, P.S. (2003) Contributions of antibiotic penetration, oxygen limitation, and low metabolic activity to the tolerance of Pseudomonas aeruginosa biofilms to ciprofloxacin and tobramycin. Antimicrob Agents Chemother 47 : 317 323.
-
(2003)
Antimicrob Agents Chemother
, vol.47
, pp. 317-323
-
-
Walters, M.C.1
Roe, F.2
Bugnicourt, A.3
Franklin, M.J.4
Stewart, P.S.5
-
30
-
-
0022678081
-
A multispecies biofilm model
-
Wanner, O. Gujer, W. (1986) A multispecies biofilm model. Biotechn Bioeng 28 : 314 328.
-
(1986)
Biotechn Bioeng
, vol.28
, pp. 314-328
-
-
Wanner, O.1
Gujer, W.2
-
31
-
-
8144221775
-
Stratified growth in Pseudomonas aeruginosa biofilms
-
Werner, E., Roe, F., Bugnicourt, A., Franklin, M.J., Heydorn, A., Molin, S., et al. (2004) Stratified growth in Pseudomonas aeruginosa biofilms. Appl Environ Microbiol 70 : 6188 6196.
-
(2004)
Appl Environ Microbiol
, vol.70
, pp. 6188-6196
-
-
Werner, E.1
Roe, F.2
Bugnicourt, A.3
Franklin, M.J.4
Heydorn, A.5
Molin, S.6
-
32
-
-
24644511094
-
A general description of detachment for multidimensional modeling of biofilms
-
Xavier, J.B., Picioreanu, C. van Loosdrecht, M.C.M. (2005) A general description of detachment for multidimensional modeling of biofilms. Biotechnol Bioeng 91 : 651 669.
-
(2005)
Biotechnol Bioeng
, vol.91
, pp. 651-669
-
-
Xavier, J.B.1
Picioreanu, C.2
Van Loosdrecht, M.C.M.3
-
33
-
-
0033991082
-
Quantifying biofilm structure using image analysis
-
Yang, X., Beyenal, H., Harkin, G. Lewandowski, Z. (2000) Quantifying biofilm structure using image analysis. J Microbiol Methods 39 : 109 119.
-
(2000)
J Microbiol Methods
, vol.39
, pp. 109-119
-
-
Yang, X.1
Beyenal, H.2
Harkin, G.3
Lewandowski, Z.4
|