메뉴 건너뛰기




Volumn 5, Issue , 2009, Pages

Backup in gene regulatory networks explains differences between binding and knockout results

Author keywords

[No Author keywords available]

Indexed keywords

DNA; SACCHAROMYCES CEREVISIAE PROTEIN; TRANSCRIPTION FACTOR; DNA BINDING PROTEIN;

EID: 67650663220     PISSN: 17444292     EISSN: 17444292     Source Type: Journal    
DOI: 10.1038/msb.2009.33s     Document Type: Article
Times cited : (69)

References (24)
  • 3
    • 1942453302 scopus 로고    scopus 로고
    • Predicting gene expression from sequence
    • Beer MA, Tavazoie S (2004) Predicting gene expression from sequence. Cell 117:185-198
    • (2004) Cell , vol.117 , pp. 185-198
    • Beer, M.A.1    Tavazoie, S.2
  • 4
    • 0030979616 scopus 로고    scopus 로고
    • Met31p and Met32p, two related zinc finger proteins, are involved in transcriptional regulation of yeast sulfur amino acid metabolism
    • Blaiseau PL, Isnard AD, Surdin-Kerjan Y, Thomas D (1997) Met31p and Met32p, two related zinc finger proteins, are involved in transcriptional regulation of yeast sulfur amino acid metabolism. Mol Cell Biol 17:3640-3648
    • (1997) Mol Cell Biol , vol.17 , pp. 3640-3648
    • Blaiseau, P.L.1    Isnard, A.D.2    Surdin-Kerjan, Y.3    Thomas, D.4
  • 8
    • 2942582468 scopus 로고    scopus 로고
    • Defining transcriptional networks through integrative modeling of mRNA expression and transcription factor binding data
    • Gao F, Foat B, Bussemaker H (2004) Defining transcriptional networks through integrative modeling of mRNA expression and transcription factor binding data. BMC Bioinformatics 5: 31
    • (2004) BMC Bioinformatics , vol.5 , pp. 31
    • Gao, F.1    Foat, B.2    Bussemaker, H.3
  • 10
    • 0035883741 scopus 로고    scopus 로고
    • Mechanisms controlling differential promoter-occupancy by the yeast forkhead proteins Fkh1p and Fkh2p: Implications for regulating the cell cycle and differentiation
    • Hollenhorst PC, Pietz G, Fox CA (2001) Mechanisms controlling differential promoter-occupancy by the yeast forkhead proteins Fkh1p and Fkh2p: implications for regulating the cell cycle and differentiation. Genes Dev 15:2445-2456
    • (2001) Genes Dev , vol.15 , pp. 2445-2456
    • Hollenhorst, P.C.1    Pietz, G.2    Fox, C.A.3
  • 12
    • 34247629588 scopus 로고    scopus 로고
    • Genetic reconstruction of a functional transcriptional regulatory network
    • Hu Z, Killion PJ, Iyer VR (2007) Genetic reconstruction of a functional transcriptional regulatory network. Nat Genet 39: 683-687
    • (2007) Nat Genet , vol.39 , pp. 683-687
    • Hu, Z.1    Killion, P.J.2    Iyer, V.R.3
  • 13
    • 15044353444 scopus 로고    scopus 로고
    • Transcription control reprogramming in genetic backup circuits
    • Kafri R, Bar-Even A, Pilpel Y (2005) Transcription control reprogramming in genetic backup circuits. Nat Genet 37: 295-299
    • (2005) Nat Genet , vol.37 , pp. 295-299
    • Kafri, R.1    Bar-Even, A.2    Pilpel, Y.3
  • 19
    • 37049010139 scopus 로고    scopus 로고
    • Membrane-active compounds activate the transcription factors Pdr1 and Pdr3 connecting pleiotropic drug resistance and membrane lipid homeostasis in Saccharomyces cerevisiae
    • Schuller C, Mamnun YM, Wolfger H, Rockwell N, Thorner J, Kuchler K (2007) Membrane-active compounds activate the transcription factors Pdr1 and Pdr3 connecting pleiotropic drug resistance and membrane lipid homeostasis in Saccharomyces cerevisiae. Mol Biol Cell 18: 4932-4944
    • (2007) Mol Biol Cell , vol.18 , pp. 4932-4944
    • Schuller, C.1    Mamnun, Y.M.2    Wolfger, H.3    Rockwell, N.4    Thorner, J.5    Kuchler, K.6
  • 22
    • 15244358503 scopus 로고    scopus 로고
    • Systematic discovery of regulatory motifs in human promoters and 3' UTRs by comparison of several mammals
    • Xie X, Lu J, Kulbokas EJ, Golub TR, Mootha V, Lindblad-Toh K, Lander ES, Kellis M (2005) Systematic discovery of regulatory motifs in human promoters and 3' UTRs by comparison of several mammals. Nature 434: 338-345
    • (2005) Nature , vol.434 , pp. 338-345
    • Xie, X.1    Lu, J.2    Kulbokas, E.J.3    Golub, T.R.4    Mootha, V.5    Lindblad-Toh, K.6    Lander, E.S.7    Kellis, M.8
  • 23
    • 33847057887 scopus 로고    scopus 로고
    • Relationships between p63 binding, DNA sequence, transcription activity, and biological function in human cells
    • Yang A, Zhu Z, Kapranov P, McKeon F, Church GM, Gingeras TR, Struhl K (2006) Relationships between p63 binding, DNA sequence, transcription activity, and biological function in human cells. Mol Cell 24: 593-602
    • (2006) Mol Cell , vol.24 , pp. 593-602
    • Yang, A.1    Zhu, Z.2    Kapranov, P.3    McKeon, F.4    Church, G.M.5    Gingeras, T.R.6    Struhl, K.7
  • 24
    • 27744521520 scopus 로고    scopus 로고
    • Validation and refinement of gene-regulatory pathways on a network of physical interactions
    • Yeang C-H, Mak HC, McCuine S, Workman C, Jaakkola T, Ideker T (2005) Validation and refinement of gene-regulatory pathways on a network of physical interactions. Genome Biol 6: R62
    • (2005) Genome Biol , vol.6
    • Yeang, C.-H.1    Mak, H.C.2    McCuine, S.3    Workman, C.4    Jaakkola, T.5    Ideker, T.6


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.