메뉴 건너뛰기




Volumn 22, Issue 8, 2009, Pages 1032-1037

A metabolic signature of the beneficial interaction of the endophyte paenibacillus sp. isolate and in vitro-grown poplar plants revealed by metabolomics

Author keywords

[No Author keywords available]

Indexed keywords

BACTERIA (MICROORGANISMS); PAENIBACILLUS; PAENIBACILLUS SP.; POPULUS;

EID: 67650506293     PISSN: 08940282     EISSN: None     Source Type: Journal    
DOI: 10.1094/MPMI-22-8-1032     Document Type: Article
Times cited : (76)

References (31)
  • 1
    • 33846243383 scopus 로고    scopus 로고
    • GCMS based metabolite profiling implies three interdependent ways of ammonium assimilation in Medicago truncatula root nodules
    • Barsch, A., Carvalho, H. G., Cullimore, J. V., and Niehaus, K. 2006a. GCMS based metabolite profiling implies three interdependent ways of ammonium assimilation in Medicago truncatula root nodules. J. Biotechnol. 127:79-83.
    • (2006) J. Biotechnol , vol.127 , pp. 79-83
    • Barsch, A.1    Carvalho, H.G.2    Cullimore, J.V.3    Niehaus, K.4
  • 2
    • 33747463644 scopus 로고    scopus 로고
    • Metabolite profiles of nodulated alfalfa plants indicate that distinct stages of nodule organogenesis are accompanied by global physiological adaptations
    • Barsch, A., Tellstrom, V., Patschkowski, T., Kuster, H., and Niehaus, K. 2006b. Metabolite profiles of nodulated alfalfa plants indicate that distinct stages of nodule organogenesis are accompanied by global physiological adaptations. Mol. Plant-Microbe Interact. 19:998-1013.
    • (2006) Mol. Plant-Microbe Interact , vol.19 , pp. 998-1013
    • Barsch, A.1    Tellstrom, V.2    Patschkowski, T.3    Kuster, H.4    Niehaus, K.5
  • 3
    • 0036202970 scopus 로고    scopus 로고
    • Paenibacillus polymyxa produces fusaricidin-type antifungal antibiotics active against Leptosphaeria maculans, the causative agent of blackleg disease of canola
    • Beatty, P. H., and Jensen, S. E. 2002. Paenibacillus polymyxa produces fusaricidin-type antifungal antibiotics active against Leptosphaeria maculans, the causative agent of blackleg disease of canola. Can. J. Microbiol. 48:159-169.
    • (2002) Can. J. Microbiol , vol.48 , pp. 159-169
    • Beatty, P.H.1    Jensen, S.E.2
  • 4
    • 0036729492 scopus 로고    scopus 로고
    • Potential for misidentification of a spore-forming Paenibacillus polymyxa isolate as an endophyte by using culture-based methods
    • Bent, E., and Chanway, C. P. 2002. Potential for misidentification of a spore-forming Paenibacillus polymyxa isolate as an endophyte by using culture-based methods. Appl. Environ. Microbiol. 68:4650-4652.
    • (2002) Appl. Environ. Microbiol , vol.68 , pp. 4650-4652
    • Bent, E.1    Chanway, C.P.2
  • 5
    • 0037900073 scopus 로고    scopus 로고
    • Gene expression associated with N-induced shifts in resource allocation in poplar
    • Cooke, J. E. K., Brown, K. A., Wu, R., and Davis, J. M. 2003. Gene expression associated with N-induced shifts in resource allocation in poplar. Plant Cell Environ. 26:757-770.
    • (2003) Plant Cell Environ , vol.26 , pp. 757-770
    • Cooke, J.E.K.1    Brown, K.A.2    Wu, R.3    Davis, J.M.4
  • 6
    • 20444439241 scopus 로고    scopus 로고
    • Lotus japonicus metabolic profiling. Development of gas chromatography-mass spectrometry resources for the study of plant-microbe interactions
    • Desbrosses, G. G., Kopka, J., and Udvardi, M. K. 2005. Lotus japonicus metabolic profiling. Development of gas chromatography-mass spectrometry resources for the study of plant-microbe interactions. Plant Physiol. 137:1302-1318.
    • (2005) Plant Physiol , vol.137 , pp. 1302-1318
    • Desbrosses, G.G.1    Kopka, J.2    Udvardi, M.K.3
  • 7
    • 0027145220 scopus 로고
    • A system for repeatable formation of elongating adventitious buds in Norway spruce tissue cultures
    • Ewald, D., and Suss, R. 1993. A system for repeatable formation of elongating adventitious buds in Norway spruce tissue cultures. Silvae Genet. 42:169-175.
    • (1993) Silvae Genet , vol.42 , pp. 169-175
    • Ewald, D.1    Suss, R.2
  • 8
    • 1842620080 scopus 로고    scopus 로고
    • Endogenous bacteria in tissue cultures of conifers-appearance and action
    • Ewald, D., Zaspel, I., and Naujoks, G. 2000. Endogenous bacteria in tissue cultures of conifers-appearance and action. Acta Hortic. 530:137-145.
    • (2000) Acta Hortic , vol.530 , pp. 137-145
    • Ewald, D.1    Zaspel, I.2    Naujoks, G.3
  • 9
    • 0001307577 scopus 로고
    • Growth enhancement and developmental modifications of in vitro grown potato (Solanum tuberosum ssp. tuberosum) as affected by a nonfluorescent Pseudomonas sp
    • Frommel, M. I., Nowak, J., and Lazarovits, G. 1991. Growth enhancement and developmental modifications of in vitro grown potato (Solanum tuberosum ssp. tuberosum) as affected by a nonfluorescent Pseudomonas sp. Plant Physiol. 96:928-936.
    • (1991) Plant Physiol , vol.96 , pp. 928-936
    • Frommel, M.I.1    Nowak, J.2    Lazarovits, G.3
  • 10
    • 0032491853 scopus 로고    scopus 로고
    • A model for the lowering of plant ethylene concentrations by plant growth-promoting bacteria
    • Glick, B. R., Penrose, D. M., and Li, J. 1998. A model for the lowering of plant ethylene concentrations by plant growth-promoting bacteria. J. Theor. Biol. 190:63-68.
    • (1998) J. Theor. Biol , vol.190 , pp. 63-68
    • Glick, B.R.1    Penrose, D.M.2    Li, J.3
  • 11
    • 33644896212 scopus 로고    scopus 로고
    • The role of mass spectrometry in plant systems biology
    • Glinski, M., and Weckwerth, W. 2006. The role of mass spectrometry in plant systems biology. Mass. Spectrom. Rev. 25:173-214.
    • (2006) Mass. Spectrom. Rev , vol.25 , pp. 173-214
    • Glinski, M.1    Weckwerth, W.2
  • 12
    • 0035987085 scopus 로고    scopus 로고
    • Azoarcus grass endophytes contribute fixed nitrogen to the plant in an unculturable state
    • Hurek, T., Handley, L. L., Reinhold-Hurek, B., and Piche, Y. 2002. Azoarcus grass endophytes contribute fixed nitrogen to the plant in an unculturable state. Mol. Plant-Microbe Interact. 15:233-242.
    • (2002) Mol. Plant-Microbe Interact , vol.15 , pp. 233-242
    • Hurek, T.1    Handley, L.L.2    Reinhold-Hurek, B.3    Piche, Y.4
  • 13
    • 62449302402 scopus 로고    scopus 로고
    • An automated GC×GC-TOF-MS protocol for batch-wise extraction and alignment of mass isotopomer matrixes from differential (13)C-labelling experiments: A case study for photoautotrophic-mixotrophic grown Chlamydomonas reinhardtii cells
    • Kempa, S., Hummel, J., Schwemmer, T., Pietzke, M., Strehmel, N., Wienkoop, S., Kopka, J., and Weckwerth, W. 2009. An automated GC×GC-TOF-MS protocol for batch-wise extraction and alignment of mass isotopomer matrixes from differential (13)C-labelling experiments: A case study for photoautotrophic-mixotrophic grown Chlamydomonas reinhardtii cells. J. Basic Microbiol. 49:82-91.
    • (2009) J. Basic Microbiol , vol.49 , pp. 82-91
    • Kempa, S.1    Hummel, J.2    Schwemmer, T.3    Pietzke, M.4    Strehmel, N.5    Wienkoop, S.6    Kopka, J.7    Weckwerth, W.8
  • 16
    • 0024714318 scopus 로고
    • Fundamental aspects of rhizobacterial plant-growth promotion research
    • Lambert, B., and Joos, H. 1989. Fundamental aspects of rhizobacterial plant-growth promotion research. Trends Biotechnol. 7:215-219.
    • (1989) Trends Biotechnol , vol.7 , pp. 215-219
    • Lambert, B.1    Joos, H.2
  • 17
    • 0030955950 scopus 로고    scopus 로고
    • Production of auxin and other indolic and phenolic compounds by Paenibacillus polymyxa strains isolated from different proximity to plant roots
    • Lebuhn, M., Heulin, T., and Hartmann, A. 1997. Production of auxin and other indolic and phenolic compounds by Paenibacillus polymyxa strains isolated from different proximity to plant roots. FEMS (Fed. Eur. Microbiol. Soc.) Microbiol. Ecol. 22:325-334.
    • (1997) FEMS (Fed. Eur. Microbiol. Soc.) Microbiol. Ecol , vol.22 , pp. 325-334
    • Lebuhn, M.1    Heulin, T.2    Hartmann, A.3
  • 18
    • 0026650034 scopus 로고
    • Bacterial growth in plant-tissue culture media
    • Leifert, C., and Waites, W. M. 1992. Bacterial growth in plant-tissue culture media. J. Appl. Bacteriol. 72:460-466.
    • (1992) J. Appl. Bacteriol , vol.72 , pp. 460-466
    • Leifert, C.1    Waites, W.M.2
  • 19
    • 84985059117 scopus 로고
    • Bacterial contaminants of micropropagated plant cultures
    • Leifert, C., Waites, W. M., and Nicholas, J. R. 1989. Bacterial contaminants of micropropagated plant cultures. J. Appl. Bacteriol. 67:353-361.
    • (1989) J. Appl. Bacteriol , vol.67 , pp. 353-361
    • Leifert, C.1    Waites, W.M.2    Nicholas, J.R.3
  • 20
    • 33846468949 scopus 로고    scopus 로고
    • Paenibacillus sabinae sp nov., a nitrogen-fixing species isolated from the rhizosphere soils of shrubs
    • Ma, Y. C., Xia, Z. Q., Liu, X. M., and Chen, S. F. 2007. Paenibacillus sabinae sp nov., a nitrogen-fixing species isolated from the rhizosphere soils of shrubs. Int. J. Syst. Evol. Microbiol. 57:6-11.
    • (2007) Int. J. Syst. Evol. Microbiol , vol.57 , pp. 6-11
    • Ma, Y.C.1    Xia, Z.Q.2    Liu, X.M.3    Chen, S.F.4
  • 21
    • 20344392462 scopus 로고    scopus 로고
    • Correlative GC-TOF-MS based metabolite profiling and LC-MS based protein profiling reveal time-related systemic regulation of metabolite- protein networks and improve pattern recognition for multiple biomarker selection
    • Morgenthal, K., Wienkoop, S., Scholz, M., Selbig, J., and Weckwerth, W. 2005. Correlative GC-TOF-MS based metabolite profiling and LC-MS based protein profiling reveal time-related systemic regulation of metabolite- protein networks and improve pattern recognition for multiple biomarker selection. Metabolomics 1:109-121.
    • (2005) Metabolomics , vol.1 , pp. 109-121
    • Morgenthal, K.1    Wienkoop, S.2    Scholz, M.3    Selbig, J.4    Weckwerth, W.5
  • 22
    • 37249065495 scopus 로고    scopus 로고
    • Integrative profiling of metabolites and proteins: Improving pattern recognition and biomarker selection for systems level approaches
    • Morgenthal, K., Wienkoop, S., Wolschin, F., and Weckwerth, W. 2007. Integrative profiling of metabolites and proteins: Improving pattern recognition and biomarker selection for systems level approaches. Methods Mol. Biol. 358:57-75.
    • (2007) Methods Mol. Biol , vol.358 , pp. 57-75
    • Morgenthal, K.1    Wienkoop, S.2    Wolschin, F.3    Weckwerth, W.4
  • 24
    • 33646010042 scopus 로고    scopus 로고
    • Metabolic changes of rhizobia in legume nodules
    • Prell, J., and Poole, P. 2006. Metabolic changes of rhizobia in legume nodules. Trends Microbiol. 14:161-168.
    • (2006) Trends Microbiol , vol.14 , pp. 161-168
    • Prell, J.1    Poole, P.2
  • 25
    • 0034917190 scopus 로고    scopus 로고
    • Characterization of pectin lyase produced by an endophytic strain isolated from coffee cherries
    • Sakiyama, C. C., Paula, E. M., Pereira, P. C., Borges, A. C., and Silva, D. O. 2001. Characterization of pectin lyase produced by an endophytic strain isolated from coffee cherries. Lett. Appl. Microbiol. 33:117-121.
    • (2001) Lett. Appl. Microbiol , vol.33 , pp. 117-121
    • Sakiyama, C.C.1    Paula, E.M.2    Pereira, P.C.3    Borges, A.C.4    Silva, D.O.5
  • 26
    • 0033230051 scopus 로고    scopus 로고
    • The plant-growth-promoting rhizobacterium Paenibacillus polymyxa induces changes in Arabidopsis thaliana gene expression: A possible connection between biotic and abiotic stress responses
    • Timmusk, S., and Wagner, E. G. H. 1999. The plant-growth-promoting rhizobacterium Paenibacillus polymyxa induces changes in Arabidopsis thaliana gene expression: A possible connection between biotic and abiotic stress responses. Mol. Plant-Microbe Interact. 12:951-959.
    • (1999) Mol. Plant-Microbe Interact , vol.12 , pp. 951-959
    • Timmusk, S.1    Wagner, E.G.H.2
  • 27
    • 43149090762 scopus 로고    scopus 로고
    • Paenibacillus-a predominant endophytic bacterium colonising tissue cultures of woody plants
    • Ulrich, K., Stauber, T., and Ewald, D. 2008a. Paenibacillus-a predominant endophytic bacterium colonising tissue cultures of woody plants. Plant Cell Tissue Org. Cult. 93:347-351.
    • (2008) Plant Cell Tissue Org. Cult , vol.93 , pp. 347-351
    • Ulrich, K.1    Stauber, T.2    Ewald, D.3
  • 28
    • 38049121467 scopus 로고    scopus 로고
    • Diversity of endophytic bacterial communities in poplar grown under field conditions
    • Ulrich, K., Ulrich, A., and Ewald, D. 2008b. Diversity of endophytic bacterial communities in poplar grown under field conditions. FEMS (Fed. Eur. Microbiol. Soc.) Microbiol. Ecol. 63:169-180.
    • (2008) FEMS (Fed. Eur. Microbiol. Soc.) Microbiol. Ecol , vol.63 , pp. 169-180
    • Ulrich, K.1    Ulrich, A.2    Ewald, D.3
  • 29
    • 38149106625 scopus 로고    scopus 로고
    • Integration of metabolomics and proteomics in molecular plant physiology-coping with the complexity by data-dimensionality reduction
    • Weckwerth, W. 2008. Integration of metabolomics and proteomics in molecular plant physiology-coping with the complexity by data-dimensionality reduction. Physiol. Plant. 132:176-189.
    • (2008) Physiol. Plant , vol.132 , pp. 176-189
    • Weckwerth, W.1
  • 30
    • 27344453869 scopus 로고    scopus 로고
    • Metabolomics: From pattern recognition to biological interpretation
    • Weckwerth, W., and Morgenthal, K. 2005. Metabolomics: From pattern recognition to biological interpretation. Drug Discov. Today 10:1551- 1558.
    • (2005) Drug Discov. Today , vol.10 , pp. 1551-1558
    • Weckwerth, W.1    Morgenthal, K.2
  • 31
    • 0942265392 scopus 로고    scopus 로고
    • Process for the integrated extraction identification, and quantification of metabolites, proteins and RNA to reveal their co-regulation in biochemical networks
    • Weckwerth, W., Wenzel, K., and Fiehn, O. 2004. Process for the integrated extraction identification, and quantification of metabolites, proteins and RNA to reveal their co-regulation in biochemical networks. Proteomics 4:78-83.
    • (2004) Proteomics , vol.4 , pp. 78-83
    • Weckwerth, W.1    Wenzel, K.2    Fiehn, O.3


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.