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Volumn 57, Issue 1, 2007, Pages 146-150

Paenibacillus soli sp. nov., a xylanolytic bacterium isolated from soil

Author keywords

[No Author keywords available]

Indexed keywords

BACTERIAL DNA; CYTOSINE; FATTY ACID; GLUCOSAMINE; RNA 16S;

EID: 33846477418     PISSN: 14665026     EISSN: None     Source Type: Journal    
DOI: 10.1099/ijs.0.64533-0     Document Type: Article
Times cited : (24)

References (36)
  • 2
    • 33846529203 scopus 로고
    • Edited by L. C. Parks. Boca Raton, FL: CRC Press
    • Atlas, R. M. (1993). Handbook of Microbiological Media, pp. 196, 843. Edited by L. C. Parks. Boca Raton, FL: CRC Press.
    • (1993) Handbook of Microbiological Media
    • Atlas, R.M.1
  • 3
    • 0020407158 scopus 로고
    • Nonstaining (KOH) method for determination of Gram reactions of marine bacteria
    • Buck, J. D. (1982). Nonstaining (KOH) method for determination of Gram reactions of marine bacteria. Appl Environ Microbiol 44, 992-993.
    • (1982) Appl Environ Microbiol , vol.44 , pp. 992-993
    • Buck, J.D.1
  • 4
    • 0343193322 scopus 로고    scopus 로고
    • Paenibacillus koreensis sp. nov., a new species that produces an iturin-like antifungal compound
    • Chung, Y. R., Kim, C. H., Hwang, I. & Chun, J. (2000). Paenibacillus koreensis sp. nov., a new species that produces an iturin-like antifungal compound. Int J Syst Evol Microbial 50, 1495-1500.
    • (2000) Int J Syst Evol Microbial , vol.50 , pp. 1495-1500
    • Chung, Y.R.1    Kim, C.H.2    Hwang, I.3    Chun, J.4
  • 5
    • 0036153511 scopus 로고    scopus 로고
    • PAH-degradation by Paenibacillus spp. and description of Paenibacillus naphthalenovorans sp. nov., a naphthalene-degrading bacterium from the rhizosphere of salt marsh plants
    • Daane, L. L., Harjono, I., Barns, S. M., Launen, L. A., Palleroni, N. J. & Haggblom, M. M. (2002). PAH-degradation by Paenibacillus spp. and description of Paenibacillus naphthalenovorans sp. nov., a naphthalene-degrading bacterium from the rhizosphere of salt marsh plants. Int J Syst Evol Microbial 52, 131-139.
    • (2002) Int J Syst Evol Microbial , vol.52 , pp. 131-139
    • Daane, L.L.1    Harjono, I.2    Barns, S.M.3    Launen, L.A.4    Palleroni, N.J.5    Haggblom, M.M.6
  • 6
    • 0024358339 scopus 로고
    • Fluorometric deoxyribonucleic acid-deoxyribonucleic acid hybridization in microdilution wells as an alternative to membrane filter hybridization in which radioisotopes are used to determine genetic relatedness among bacterial strains
    • Ezaki, T., Hashimoto, Y. & Yabuuchi, E. (1989). Fluorometric deoxyribonucleic acid-deoxyribonucleic acid hybridization in microdilution wells as an alternative to membrane filter hybridization in which radioisotopes are used to determine genetic relatedness among bacterial strains. Int J Syst Bacterial 39, 224-229.
    • (1989) Int J Syst Bacterial , vol.39 , pp. 224-229
    • Ezaki, T.1    Hashimoto, Y.2    Yabuuchi, E.3
  • 7
    • 0000461280 scopus 로고
    • Confidence limit on phylogenies: An approach using the bootstrap
    • Felsenstein, J. (1985). Confidence limit on phylogenies: an approach using the bootstrap. Evolution 39, 783-791.
    • (1985) Evolution , vol.39 , pp. 783-791
    • Felsenstein, J.1
  • 8
    • 84959747425 scopus 로고
    • Toward defining the course of evolution: Minimum change for a specific tree topology
    • Fitch, W. M. (1971). Toward defining the course of evolution: minimum change for a specific tree topology. Syst Zool 20, 406-416.
    • (1971) Syst Zool , vol.20 , pp. 406-416
    • Fitch, W.M.1
  • 9
    • 0002051540 scopus 로고    scopus 로고
    • BIOEDIT: A user-friendly biological sequence alignment editor and analysis program for Windows 95/98/NT
    • Hall, T. A. (1999). BIOEDIT: a user-friendly biological sequence alignment editor and analysis program for Windows 95/98/NT. Nucleic Acids Symp Ser 41, 95-98.
    • (1999) Nucleic Acids Symp Ser , vol.41 , pp. 95-98
    • Hall, T.A.1
  • 10
    • 0028883727 scopus 로고
    • Paenibacillus (formerly Bacillus) gordonae (Pichinoty et al. 1986) Ash et al. 1994 is a later subjective synonym of Paenibacillus (formerly Bacillus) validus (Nakamura 1984) Ash et al. 1994: emended description of P. validus
    • Heyndrickx, M., Vandemeulebroecke, K., Scheldeman, P., Hoste, B., Kersters, K., De Vos, P., Logan, N. A., Aziz, A. M., Ali, N. & Berkeley, R. C. (1995). Paenibacillus (formerly Bacillus) gordonae (Pichinoty et al. 1986) Ash et al. 1994 is a later subjective synonym of Paenibacillus (formerly Bacillus) validus (Nakamura 1984) Ash et al. 1994: emended description of P. validus. Int J Syst Bacteriol 45, 661-669.
    • (1995) Int J Syst Bacteriol , vol.45 , pp. 661-669
    • Heyndrickx, M.1    Vandemeulebroecke, K.2    Scheldeman, P.3    Hoste, B.4    Kersters, K.5    De Vos, P.6    Logan, N.A.7    Aziz, A.M.8    Ali, N.9    Berkeley, R.C.10
  • 11
    • 33044498302 scopus 로고    scopus 로고
    • Isolation and diversity of bacteria having extracellular degrading enzymes of xylan and/or amylose and/or cellulose
    • In abstract B4022 Seoul: The Microbiological Society of Korea
    • Kang, M.-S., Im, W.-T., Ten, L. N. & Lee, S.-T. (2003). Isolation and diversity of bacteria having extracellular degrading enzymes of xylan and/or amylose and/or cellulose. In Proceedings of the International Meeting of the Federation of Korean Microbiological Societies 2003, abstract B4022, p. 165. Seoul: The Microbiological Society of Korea.
    • (2003) Proceedings of the International Meeting of the Federation of Korean Microbiological Societies 2003 , pp. 165
    • Kang, M.-S.1    Im, W.-T.2    Ten, L.N.3    Lee, S.-T.4
  • 13
    • 19344364985 scopus 로고    scopus 로고
    • Sphingopyxis granuli sp. nov., a β-glucosidase producing bacterium in the family Sphingomonadaceae in α-4 subclass of the Proteobacteria
    • Kim, M. K., Im, W.-T., Ohta, H., Lee, M. & Lee, S.-T. (2005). Sphingopyxis granuli sp. nov., a β-glucosidase producing bacterium in the family Sphingomonadaceae in α-4 subclass of the Proteobacteria. J Microbiol 43, 152-157.
    • (2005) J Microbiol , vol.43 , pp. 152-157
    • Kim, M.K.1    Im, W.-T.2    Ohta, H.3    Lee, M.4    Lee, S.-T.5
  • 15
    • 77956800518 scopus 로고
    • Lipid and cell wall analysis in bacterial systematics
    • Komagata, K. & Suzuki, K. I. (1987). Lipid and cell wall analysis in bacterial systematics. Methods Microbiol 19, 161-207.
    • (1987) Methods Microbiol , vol.19 , pp. 161-207
    • Komagata, K.1    Suzuki, K.I.2
  • 16
    • 0023089142 scopus 로고
    • Specific and sensitive plate assay for bacterial lipase
    • Kouker, G. & Jaeger, K.-E. (1987). Specific and sensitive plate assay for bacterial lipase. Appl Environ Microbiol 53, 211-213.
    • (1987) Appl Environ Microbiol , vol.53 , pp. 211-213
    • Kouker, G.1    Jaeger, K.-E.2
  • 17
    • 3242810318 scopus 로고    scopus 로고
    • MEGA3: Integrated software for molecular evolutionary genetics analysis and sequence alignment
    • Kumar, S., Tamura, K. & Nei, M. (2004). MEGA3: integrated software for molecular evolutionary genetics analysis and sequence alignment. Brief Bioinform 5, 150-163.
    • (2004) Brief Bioinform , vol.5 , pp. 150-163
    • Kumar, S.1    Tamura, K.2    Nei, M.3
  • 18
    • 0030031706 scopus 로고    scopus 로고
    • Bacillus ehimensis sp. nov. and Bacillus chitinolyticus sp. nov., new chitinolytic members of the genus Bacillus
    • Kuroshima, K.-I., Sakane, T., Takata, R. & Yokota, A. (1996). Bacillus ehimensis sp. nov. and Bacillus chitinolyticus sp. nov., new chitinolytic members of the genus Bacillus. Int J Syst Bacteriol 46, 76-80.
    • (1996) Int J Syst Bacteriol , vol.46 , pp. 76-80
    • Kuroshima, K.-I.1    Sakane, T.2    Takata, R.3    Yokota, A.4
  • 19
    • 0000198211 scopus 로고
    • Precise measurement of the G+C content of deoxyribonucleic acid by high-performance liquid chromatography
    • Mesbah, M., Premachandran, U. & Whitman, W. B. (1989). Precise measurement of the G+C content of deoxyribonucleic acid by high-performance liquid chromatography. Int J Syst Bacteriol 39, 159-167.
    • (1989) Int J Syst Bacteriol , vol.39 , pp. 159-167
    • Mesbah, M.1    Premachandran, U.2    Whitman, W.B.3
  • 22
    • 16844368871 scopus 로고    scopus 로고
    • Paembacillus phyllosphaerae sp. nov., a xylanolytic bacterium isolated from phyllosphere of Phoenix dactylifera
    • Rivas, R., Mateos, P. F., Martínez-Molina, E. & Velázquez, E. (2005b). Paembacillus phyllosphaerae sp. nov., a xylanolytic bacterium isolated from phyllosphere of Phoenix dactylifera. Int J Syst Evol Microbiol 55, 743-746.
    • (2005) Int J Syst Evol Microbiol , vol.55 , pp. 743-746
    • Rivas, R.1    Mateos, P.F.2    Martínez-Molina, E.3    Velázquez, E.4
  • 24
    • 0023375195 scopus 로고
    • The neighbor-joining method: A new method for reconstructing phylogenetic trees
    • Saitou, N. & Nei, M. (1987). The neighbor-joining method: a new method for reconstructing phylogenetic trees. Mol Biol Evol 4, 406-425.
    • (1987) Mol Biol Evol , vol.4 , pp. 406-425
    • Saitou, N.1    Nei, M.2
  • 26
    • 0003968487 scopus 로고
    • Identification of Bacteria by Gas Chromatography of Cellular Fatty Acids
    • MIDI Technical Note 101. Newark, DE: MIDI
    • Sasser, M. (1990). Identification of Bacteria by Gas Chromatography of Cellular Fatty Acids. MIDI Technical Note 101. Newark, DE: MIDI.
    • (1990)
    • Sasser, M.1
  • 27
    • 0015462556 scopus 로고
    • Peptidoglycan types of bacterial cell walls and their taxonomic implications
    • Schleifer, K. H. & Kandler, O. (1972). Peptidoglycan types of bacterial cell walls and their taxonomic implications. Bacteriol Rev 36, 407-477.
    • (1972) Bacteriol Rev , vol.36 , pp. 407-477
    • Schleifer, K.H.1    Kandler, O.2
  • 28
    • 0030999754 scopus 로고    scopus 로고
    • Transfer of Bacillus alginolyticus, Bacillus chondroitinus, Bacillus curdlanolyticus, Bacillus glucanolyticus, Bacillus kobensis, and Bacillus thiaminolyticus to the genus Paenibacillus and emended description of the genus Paenibacillus
    • Shida, O., Takagi, H., Kadowaki, K., Nakamura, L. K. & Komagata, K. (1997). Transfer of Bacillus alginolyticus, Bacillus chondroitinus, Bacillus curdlanolyticus, Bacillus glucanolyticus, Bacillus kobensis, and Bacillus thiaminolyticus to the genus Paenibacillus and emended description of the genus Paenibacillus. Int J Syst Bacteriol 47, 289-298.
    • (1997) Int J Syst Bacteriol , vol.47 , pp. 289-298
    • Shida, O.1    Takagi, H.2    Kadowaki, K.3    Nakamura, L.K.4    Komagata, K.5
  • 29
    • 0028028182 scopus 로고
    • Taxonomic note: A place for DNA-DNA reassociation and 16S rRNA sequence analysis in the present species definition in bacteriology
    • Stackebrandt, E. & Goebel, B. M. (1994). Taxonomic note: a place for DNA-DNA reassociation and 16S rRNA sequence analysis in the present species definition in bacteriology. Int J Syst Bacteriol 44, 846-849.
    • (1994) Int J Syst Bacteriol , vol.44 , pp. 846-849
    • Stackebrandt, E.1    Goebel, B.M.2
  • 30
    • 0033115002 scopus 로고    scopus 로고
    • Polysaccharases for microbial exopolysaccharides
    • Sutherland, I. W. (1999). Polysaccharases for microbial exopolysaccharides. Carbohydr Polym 38, 319-328.
    • (1999) Carbohydr Polym , vol.38 , pp. 319-328
    • Sutherland, I.W.1
  • 31
    • 16844365635 scopus 로고    scopus 로고
    • Paenibacillus hodogayensis sp. nov., capable of degrading the polysaccharide produced by Sphaerotilus natans
    • Takeda, M., Suzuki, I. & Koizumi, J. (2005). Paenibacillus hodogayensis sp. nov., capable of degrading the polysaccharide produced by Sphaerotilus natans. Int J Syst Evol Microbiol 55, 737-741.
    • (2005) Int J Syst Evol Microbiol , vol.55 , pp. 737-741
    • Takeda, M.1    Suzuki, I.2    Koizumi, J.3
  • 32
    • 1142273245 scopus 로고    scopus 로고
    • Development of a plate technique for screening of polysaccharide-degrading microorganisms by using a mixture of insoluble chromogenic substrates J
    • Ten, L. N., Im, W.-T., Kim, M.-K., Kang, M.-S. & Lee, S.-T. (2004). Development of a plate technique for screening of polysaccharide-degrading microorganisms by using a mixture of insoluble chromogenic substrates. J Microbiol Methods 56, 375-382.
    • (2004) Microbiol Methods , vol.56 , pp. 375-382
    • Ten, L.N.1    Im, W.-T.2    Kim, M.-K.3    Kang, M.-S.4    Lee, S.-T.5
  • 33
    • 0027999854 scopus 로고
    • Insect digestive enzymes: Properties, compartmentalization and function
    • Terra, W. R. & Ferreira, C. (1994). Insect digestive enzymes: properties, compartmentalization and function. Comp Biochem Physiol Part B Biochem Mol Biol 109, 1-62.
    • (1994) Comp Biochem Physiol Part B Biochem Mol Biol , vol.109 , pp. 1-62
    • Terra, W.R.1    Ferreira, C.2
  • 34
    • 0031574072 scopus 로고    scopus 로고
    • The CLUSTAL_X windows interface: Flexible strategies for multiple sequence alignment aided by quality analysis tools
    • Thompson, J. D., Gibson, T. J., Plewniak, F., Jeanmougin, F. & Higgins, D. G. (1997). The CLUSTAL_X windows interface: flexible strategies for multiple sequence alignment aided by quality analysis tools. Nucleic Acids Res 24, 4876-4882.
    • (1997) Nucleic Acids Res , vol.24 , pp. 4876-4882
    • Thompson, J.D.1    Gibson, T.J.2    Plewniak, F.3    Jeanmougin, F.4    Higgins, D.G.5
  • 35
    • 0000770675 scopus 로고
    • Report of the ad hoc committee on reconciliation of approaches to bacterial systematics
    • & other authors International Committee on Systematic Bacteriology
    • Wayne, L. G., Brenner, D. J., Colwell, R. R., Grimont, P. A. D., Kandler, O., Krichevsky, M. I., Moore, L. H., Moore, W. E. C., Murray, R. G. E. & other authors (1987). International Committee on Systematic Bacteriology. Report of the ad hoc committee on reconciliation of approaches to bacterial systematics. Int J Syst Bacteriol 37, 463-464.
    • (1987) Int J Syst Bacteriol , vol.37 , pp. 463-464
    • Wayne, L.G.1    Brenner, D.J.2    Colwell, R.R.3    Grimont, P.A.D.4    Kandler, O.5    Krichevsky, M.I.6    Moore, L.H.7    Moore, W.E.C.8    Murray, R.G.E.9


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.