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Volumn 137, Issue 4, 2005, Pages 1302-1318

Lotus japonicus metabolic profiling. Development of gas chromatography-mass spectrometry resources for the study of plant-microbe interactions

Author keywords

[No Author keywords available]

Indexed keywords

GAS CHROMATOGRAPHY; MASS SPECTROMETRY; METABOLISM; PLANT CELL CULTURE; PRINCIPAL COMPONENT ANALYSIS;

EID: 20444439241     PISSN: 00320889     EISSN: None     Source Type: Journal    
DOI: 10.1104/pp.104.054957     Document Type: Conference Paper
Times cited : (174)

References (53)
  • 4
    • 0025887460 scopus 로고
    • Development of the legume root nodule
    • Brewin NJ (1991) Development of the legume root nodule. Annu Rev Cell Biol 7: 191-226
    • (1991) Annu Rev Cell Biol , vol.7 , pp. 191-226
    • Brewin, N.J.1
  • 5
    • 0015189585 scopus 로고
    • Control of leghemoglobin synthesis in snakes beans
    • Broughton WJ, Dilworth M (1971) Control of leghemoglobin synthesis in snakes beans. Biochem J 125: 1075-1080
    • (1971) Biochem J , vol.125 , pp. 1075-1080
    • Broughton, W.J.1    Dilworth, M.2
  • 6
    • 0142121364 scopus 로고    scopus 로고
    • Profiling phenolic metabolites in transgenic alfalfa modified in lignin biosynthesis
    • Chen F, Duran AL, Blount JW, Sumner LW, Dixon RA (2003) Profiling phenolic metabolites in transgenic alfalfa modified in lignin biosynthesis. Phytochemistry 64: 1013-1021
    • (2003) Phytochemistry , vol.64 , pp. 1013-1021
    • Chen, F.1    Duran, A.L.2    Blount, J.W.3    Sumner, L.W.4    Dixon, R.A.5
  • 7
    • 4143050209 scopus 로고    scopus 로고
    • Global changes in transcription orchestrate metabolic differentiation during symbiotic nitrogen fixation in Lotus japonicus
    • Colebatch G, Desbrosses G, Ott T, Krusell T, Montanari O, Kloska S, Kopka J, Udvardi MK (2004) Global changes in transcription orchestrate metabolic differentiation during symbiotic nitrogen fixation in Lotus japonicus. Plant J 39: 487-512
    • (2004) Plant J , vol.39 , pp. 487-512
    • Colebatch, G.1    Desbrosses, G.2    Ott, T.3    Krusell, T.4    Montanari, O.5    Kloska, S.6    Kopka, J.7    Udvardi, M.K.8
  • 9
    • 0002782330 scopus 로고
    • Enzymes of carbohydrate-metabolism in soybean nodules
    • Copeland L, Vella J, Hong ZQ (1989) Enzymes of carbohydrate-metabolism in soybean nodules. Phytochemistry 28: 57-61
    • (1989) Phytochemistry , vol.28 , pp. 57-61
    • Copeland, L.1    Vella, J.2    Hong, Z.Q.3
  • 10
    • 0000377892 scopus 로고
    • Carbon metabolism and compartmentation in nitrogen-fixing legume nodules
    • Day DA, Copeland L (1991) Carbon metabolism and compartmentation in nitrogen-fixing legume nodules. Plant Physiol Biochem 29: 185-201
    • (1991) Plant Physiol Biochem , vol.29 , pp. 185-201
    • Day, D.A.1    Copeland, L.2
  • 11
    • 0037356824 scopus 로고    scopus 로고
    • The rest of the iceberg. Legume diversity and evolution in a phylogenetic context
    • Doyle JJ, Luckow MA (2003) The rest of the iceberg. Legume diversity and evolution in a phylogenetic context. Plant Physiol 131: 900-910
    • (2003) Plant Physiol , vol.131 , pp. 900-910
    • Doyle, J.J.1    Luckow, M.A.2
  • 12
    • 0142033903 scopus 로고    scopus 로고
    • Metabolomics spectral formatting, alignment and conversion tools (MSFACTs)
    • Duran AL, Yang J, Wang LJ, Sumner LW (2003) Metabolomics spectral formatting, alignment and conversion tools (MSFACTs). Bioinformatics 19: 2283-2293
    • (2003) Bioinformatics , vol.19 , pp. 2283-2293
    • Duran, A.L.1    Yang, J.2    Wang, L.J.3    Sumner, L.W.4
  • 14
    • 0036787226 scopus 로고    scopus 로고
    • Altered metabolic fluxes result from shifts in metabolite levels in sucrose phosphorylase-expressing potato tubers
    • Fernie AR, Tiessen A, Stitt M, Willmitzer L, Geigenberger P (2002) Altered metabolic fluxes result from shifts in metabolite levels in sucrose phosphorylase-expressing potato tubers. Plant Cell Environ 25: 1219-1232
    • (2002) Plant Cell Environ , vol.25 , pp. 1219-1232
    • Fernie, A.R.1    Tiessen, A.2    Stitt, M.3    Willmitzer, L.4    Geigenberger, P.5
  • 15
    • 0036007687 scopus 로고    scopus 로고
    • Metabolomics: The link between genotypes and phenotypes
    • Fiehn O (2002) Metabolomics: the link between genotypes and phenotypes. Plant Mol Biol 48: 155-171
    • (2002) Plant Mol Biol , vol.48 , pp. 155-171
    • Fiehn, O.1
  • 17
    • 0030218090 scopus 로고    scopus 로고
    • Environmental regulation of rhizobial symbiotic nitrogen fixation genes
    • Fischer HM (1996) Environmental regulation of rhizobial symbiotic nitrogen fixation genes. Trends Microbiol 4: 317-320
    • (1996) Trends Microbiol , vol.4 , pp. 317-320
    • Fischer, H.M.1
  • 19
    • 0023394497 scopus 로고
    • Requirement of succinate dehydrogenase activity for symbiotic bacteroid differentiation of Rhizobium meliloti in alfalfa nodules
    • Gardiol AE, Truchet GL, Dazzo FB (1987) Requirement of succinate dehydrogenase activity for symbiotic bacteroid differentiation of Rhizobium meliloti in alfalfa nodules. Appl Environ Microbiol 53: 1947-1950
    • (1987) Appl Environ Microbiol , vol.53 , pp. 1947-1950
    • Gardiol, A.E.1    Truchet, G.L.2    Dazzo, F.B.3
  • 20
    • 0032819393 scopus 로고    scopus 로고
    • Sucrose synthase in legume nodules is essential for nitrogen fixation
    • Gordon AJ, Minchin FR, James CL, Komina O (1999) Sucrose synthase in legume nodules is essential for nitrogen fixation. Plant Physiol 120: 867-878
    • (1999) Plant Physiol , vol.120 , pp. 867-878
    • Gordon, A.J.1    Minchin, F.R.2    James, C.L.3    Komina, O.4
  • 21
    • 0037138280 scopus 로고    scopus 로고
    • Metabolic profiling of saponins in Medicago sativa and Medicago truncatula using HPLC coupled to an electrospray ion-trap mass spectrometer
    • Huhman DV, Sumner LW (2002) Metabolic profiling of saponins in Medicago sativa and Medicago truncatula using HPLC coupled to an electrospray ion-trap mass spectrometer. Phytochemistry 59: 347-360
    • (2002) Phytochemistry , vol.59 , pp. 347-360
    • Huhman, D.V.1    Sumner, L.W.2
  • 23
    • 0026800943 scopus 로고
    • Analysis of legume oligosaccharides by high-resolution gas-chromatography
    • Karoutis AI, Tyler RT, Slater GP (1992) Analysis of legume oligosaccharides by high-resolution gas-chromatography. J Chromatogr 623: 186-190
    • (1992) J Chromatogr , vol.623 , pp. 186-190
    • Karoutis, A.I.1    Tyler, R.T.2    Slater, G.P.3
  • 24
    • 0028267788 scopus 로고
    • Isolation, identification and toxicity of saponin from different legumes
    • Khalil AH, Eladawy TA (1994) Isolation, identification and toxicity of saponin from different legumes. Food Chem 50: 197-201
    • (1994) Food Chem , vol.50 , pp. 197-201
    • Khalil, A.H.1    Eladawy, T.A.2
  • 25
    • 4043063503 scopus 로고    scopus 로고
    • Metabolite profiling in plant biology: Platforms and destinations
    • Kopka J, Fernie A, Weckwerth W, Gibon Y, Stitt M (2004) Metabolite profiling in plant biology: platforms and destinations. Genome Biology 5: 109-117
    • (2004) Genome Biology , vol.5 , pp. 109-117
    • Kopka, J.1    Fernie, A.2    Weckwerth, W.3    Gibon, Y.4    Stitt, M.5
  • 27
    • 0032126279 scopus 로고    scopus 로고
    • Alfalfa malate dehydrogenase (MDH): Molecular cloning and characterization of five different forms reveals a unique nodule-enhanced MDH
    • Miller SS, Driscoll BT, Gregerson RG, Gantt JS, Vance CP (1998) Alfalfa malate dehydrogenase (MDH): molecular cloning and characterization of five different forms reveals a unique nodule-enhanced MDH. Plant J 15: 173-184
    • (1998) Plant J , vol.15 , pp. 173-184
    • Miller, S.S.1    Driscoll, B.T.2    Gregerson, R.G.3    Gantt, J.S.4    Vance, C.P.5
  • 30
    • 0026954737 scopus 로고
    • Alfalfa root nodule phosphoenolpyruvate carboxylase: Characterization of the cDNA and expression in effective and plant-controlled ineffective nodules
    • Pathirana SM, Vance CP, Miller SS, Gantt JS (1992) Alfalfa root nodule phosphoenolpyruvate carboxylase: characterization of the cDNA and expression in effective and plant-controlled ineffective nodules. Plant Mol Biol 20: 437-450
    • (1992) Plant Mol Biol , vol.20 , pp. 437-450
    • Pathirana, S.M.1    Vance, C.P.2    Miller, S.S.3    Gantt, J.S.4
  • 31
    • 0002481120 scopus 로고
    • Evolution and systematics of the Leguminosae
    • RM Polhill, PH Raven, eds, Royal Botanic Gardens, Kew, UK
    • Polhill RM, Raven PH, Stirton CH (1981) Evolution and systematics of the Leguminosae. In RM Polhill, PH Raven, eds, Advances in Legume Systematics Part 1. Royal Botanic Gardens, Kew, UK pp 1-26
    • (1981) Advances in Legume Systematics Part 1 , pp. 1-26
    • Polhill, R.M.1    Raven, P.H.2    Stirton, C.H.3
  • 32
    • 0019262924 scopus 로고
    • Oxygen and hydrogen in biological nitrogen-fixation
    • Robson RL, Postgate JR (1980) Oxygen and hydrogen in biological nitrogen-fixation. Annu Rev Microbiol 34: 183-207
    • (1980) Annu Rev Microbiol , vol.34 , pp. 183-207
    • Robson, R.L.1    Postgate, J.R.2
  • 33
    • 0035105106 scopus 로고    scopus 로고
    • Metabolic profiling allows comprehensive phenotyping of genetically or environmentally modified plant systems
    • Roessner U, Luedemann A, Brust D, Fiehn O, Linke T, Willmitzer L, Fernie AR (2001a) Metabolic profiling allows comprehensive phenotyping of genetically or environmentally modified plant systems. Plant Cell 13: 11-29
    • (2001) Plant Cell , vol.13 , pp. 11-29
    • Roessner, U.1    Luedemann, A.2    Brust, D.3    Fiehn, O.4    Linke, T.5    Willmitzer, L.6    Fernie, A.R.7
  • 34
    • 0034218717 scopus 로고    scopus 로고
    • Technical advance: Simultaneous analysis of metabolites in potato tuber by gas chromatography-mass spectrometry
    • Roessner U, Wagner C, Kopka J, Trethewey RN, Willmitzer L (2000) Technical advance: simultaneous analysis of metabolites in potato tuber by gas chromatography-mass spectrometry. Plant J 23: 131-142
    • (2000) Plant J , vol.23 , pp. 131-142
    • Roessner, U.1    Wagner, C.2    Kopka, J.3    Trethewey, R.N.4    Willmitzer, L.5
  • 35
    • 0035201029 scopus 로고    scopus 로고
    • High-resolution metabolic phenotyping of genetically and environmentally diverse potato tuber systems. Identification of phenocopies
    • Roessner U, Willmitzer L, Fernie AR (2001b) High-resolution metabolic phenotyping of genetically and environmentally diverse potato tuber systems. Identification of phenocopies. Plant Physiol 127: 749-764
    • (2001) Plant Physiol , vol.127 , pp. 749-764
    • Roessner, U.1    Willmitzer, L.2    Fernie, A.R.3
  • 36
    • 0141787875 scopus 로고    scopus 로고
    • Metabolic profiling of transgenic tomato plants overexpressing hexokinase reveals that the influence of hexose phosphorylation diminishes during fruit development
    • Roessner-Tunali U, Hegemann B, Lytovchenko A, Carrari F, Bruedigam C, Granot D, Fernie AR (2003) Metabolic profiling of transgenic tomato plants overexpressing hexokinase reveals that the influence of hexose phosphorylation diminishes during fruit development. Plant Physiol 133: 84-99
    • (2003) Plant Physiol , vol.133 , pp. 84-99
    • Roessner-Tunali, U.1    Hegemann, B.2    Lytovchenko, A.3    Carrari, F.4    Bruedigam, C.5    Granot, D.6    Fernie, A.R.7
  • 37
    • 0000463480 scopus 로고
    • C4-dicarboxylate transport mutants of rhizobium trifolii form ineffective nodules on trifolium repens
    • USA
    • Ronson CW, Lyttleton P, Robertson JG (1981) C4-dicarboxylate transport mutants of rhizobium trifolii form ineffective nodules on trifolium repens. Proc Natl Acad Sci USA 78: 4284-4288
    • (1981) Proc Natl Acad Sci , vol.78 , pp. 4284-4288
    • Ronson, C.W.1    Lyttleton, P.2    Robertson, J.G.3
  • 38
    • 0002037283 scopus 로고
    • Homology in endosymbiotic systems: The term 'symbiosome'
    • R Palacios, DPS Verma, eds, American Phytopathological Society Press, St. Paul
    • Roth E, Jeon K, Stacey G (1988) Homology in endosymbiotic systems: the term 'symbiosome'. In R Palacios, DPS Verma, eds, Molecular Genetics of Plant-Microbe Interactions. American Phytopathological Society Press, St. Paul, pp 220-225
    • (1988) Molecular Genetics of Plant-Microbe Interactions , pp. 220-225
    • Roth, E.1    Jeon, K.2    Stacey, G.3
  • 39
    • 0041335297 scopus 로고    scopus 로고
    • Disparate oxygen responsiveness of two regulatory cascades that control expression of symbiotic genes in Bradyrhizobium japonicum
    • Sciotti MA, Chanfon A, Hennecke H, Fischer HM (2003) Disparate oxygen responsiveness of two regulatory cascades that control expression of symbiotic genes in Bradyrhizobium japonicum. J Bacteriol 185: 5639-5642
    • (2003) J Bacteriol , vol.185 , pp. 5639-5642
    • Sciotti, M.A.1    Chanfon, A.2    Hennecke, H.3    Fischer, H.M.4
  • 40
    • 0033369126 scopus 로고    scopus 로고
    • Flavonoids in seed and root exudates of Lotus pedunculatus and their biotransformation by Mesorhizobium loti
    • Steele HL, Werner D, Cooper JE (1999) Flavonoids in seed and root exudates of Lotus pedunculatus and their biotransformation by Mesorhizobium loti. Physiol Plant 107: 251-258
    • (1999) Physiol Plant , vol.107 , pp. 251-258
    • Steele, H.L.1    Werner, D.2    Cooper, J.E.3
  • 41
    • 0033452842 scopus 로고    scopus 로고
    • An integrated method for spectrum extraction and compound identification from gas chromatography/mass spectrometry data
    • Stein SE (1999) An integrated method for spectrum extraction and compound identification from gas chromatography/mass spectrometry data. J Am Soc Mass Spectrom 10: 770-781
    • (1999) J Am Soc Mass Spectrom , vol.10 , pp. 770-781
    • Stein, S.E.1
  • 42
    • 0001036723 scopus 로고
    • Carbohydrates in soybean nodules. II. Distribution of compounds in seedlings during the onset of nitrogen fixation
    • Streeter JG (1980) Carbohydrates in soybean nodules. II. Distribution of compounds in seedlings during the onset of nitrogen fixation. Plant Physiol 66: 471-476
    • (1980) Plant Physiol , vol.66 , pp. 471-476
    • Streeter, J.G.1
  • 43
    • 0000547350 scopus 로고
    • Carbohydrate, organic acid and amino acid composition of bacteroids and cytosol from soybean nodules
    • Streeter JG (1987) Carbohydrate, organic acid and amino acid composition of bacteroids and cytosol from soybean nodules. Plant Physiol 85: 768-773
    • (1987) Plant Physiol , vol.85 , pp. 768-773
    • Streeter, J.G.1
  • 44
    • 0010418575 scopus 로고
    • Carbohydrates in soybean nodules: Identification of compounds and possible relationships to nitrogen fixation
    • Streeter JG, Bosler ME (1976) Carbohydrates in soybean nodules: identification of compounds and possible relationships to nitrogen fixation. Plant Sci Lett 7: 321-329
    • (1976) Plant Sci Lett , vol.7 , pp. 321-329
    • Streeter, J.G.1    Bosler, M.E.2
  • 45
    • 0345270397 scopus 로고    scopus 로고
    • Plant metabolomics: Large-scale phytochemistry in the functional genomics era
    • Sumner LW, Mendes P, Dixon RA (2003) Plant metabolomics: large-scale phytochemistry in the functional genomics era. Phytochemistry 62: 817-836
    • (2003) Phytochemistry , vol.62 , pp. 817-836
    • Sumner, L.W.1    Mendes, P.2    Dixon, R.A.3
  • 46
    • 0037083636 scopus 로고    scopus 로고
    • Analysis of highly polar compounds of plant origin: Combination of hydrophilic interaction chromatography and electrospray ion trap mass spectrometry
    • Tolstikov VV, Fiehn O (2002) Analysis of highly polar compounds of plant origin: combination of hydrophilic interaction chromatography and electrospray ion trap mass spectrometry. Anal Biochem 301: 298-307
    • (2002) Anal Biochem , vol.301 , pp. 298-307
    • Tolstikov, V.V.1    Fiehn, O.2
  • 47
    • 0345168159 scopus 로고    scopus 로고
    • Monolithic silica-based capillary reversed-phase liquid chromatography/electrospray mass spectrometry for plant metabolomics
    • Tolstikov VV, Lommen A, Nakanishi K, Tanaka N, Fiehn O (2003) Monolithic silica-based capillary reversed-phase liquid chromatography/electrospray mass spectrometry for plant metabolomics. Anal Chem 75: 6737-6740
    • (2003) Anal Chem , vol.75 , pp. 6737-6740
    • Tolstikov, V.V.1    Lommen, A.2    Nakanishi, K.3    Tanaka, N.4    Fiehn, O.5
  • 48
    • 0345950222 scopus 로고    scopus 로고
    • Metabolite transport across symbiotic membrane of legume nodules
    • Udvardi MK, Day DA (1997) Metabolite transport across symbiotic membrane of legume nodules. Annu Rev Plant Physiol Plant Mol Biol 48: 493-523
    • (1997) Annu Rev Plant Physiol Plant Mol Biol , vol.48 , pp. 493-523
    • Udvardi, M.K.1    Day, D.A.2
  • 49
    • 0001946682 scopus 로고
    • A dicarboxylate transporter on the peribacteroid membrane of soybean nodules
    • Udvardi MK, Price GD, Gresshoff PM, Day DA (1988) A dicarboxylate transporter on the peribacteroid membrane of soybean nodules. FEBS Lett 231: 36-40
    • (1988) FEBS Lett , vol.231 , pp. 36-40
    • Udvardi, M.K.1    Price, G.D.2    Gresshoff, P.M.3    Day, D.A.4
  • 50
    • 0002762093 scopus 로고
    • Primary assimilation of nitrogen in alfalfa nodules: Molecular-features of the enzymes involved
    • Vance CP, Gregerson RG, Robinson DL, Miller SS, Gantt JS (1994) Primary assimilation of nitrogen in alfalfa nodules: molecular-features of the enzymes involved. Plant Sci 101: 51-64
    • (1994) Plant Sci , vol.101 , pp. 51-64
    • Vance, C.P.1    Gregerson, R.G.2    Robinson, D.L.3    Miller, S.S.4    Gantt, J.S.5
  • 51
    • 0006105703 scopus 로고
    • Symbiotic properties of Lotus-pedunculatus root-nodules induced by Rhizobium-loti and Bradyrhizobium sp (Lotus)
    • Vance CP, Reibach PH, Pankhurst CE (1987) Symbiotic properties of Lotus-pedunculatus root-nodules induced by Rhizobium-loti and Bradyrhizobium sp (Lotus). Physiol Plant 69: 435-442
    • (1987) Physiol Plant , vol.69 , pp. 435-442
    • Vance, C.P.1    Reibach, P.H.2    Pankhurst, C.E.3
  • 52
    • 0345701915 scopus 로고    scopus 로고
    • Construction and application of a mass spectral and retention time index database generated from plant GC/EI-TOF-MS metabolite profiles
    • Wagner C, Sefkow M, Kopka J (2003) Construction and application of a mass spectral and retention time index database generated from plant GC/EI-TOF-MS metabolite profiles. Phytochemistry 62: 887-900
    • (2003) Phytochemistry , vol.62 , pp. 887-900
    • Wagner, C.1    Sefkow, M.2    Kopka, J.3
  • 53
    • 0037353653 scopus 로고    scopus 로고
    • Proteome analysis, novel proteins identified at the Peribacteroid membrane from Lotus japonicus root nodules
    • Wienkoop S, Saalbach G (2003) Proteome analysis, novel proteins identified at the Peribacteroid membrane from Lotus japonicus root nodules. Plant Physiol 131: 1080-1090
    • (2003) Plant Physiol , vol.131 , pp. 1080-1090
    • Wienkoop, S.1    Saalbach, G.2


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