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Volumn 4, Issue 6, 2009, Pages

Alpha-helical protein networks are self-protective and flaw-tolerant

Author keywords

[No Author keywords available]

Indexed keywords

ALPHA HELIX; ARTICLE; COMPUTER MODEL; COMPUTER SIMULATION; CONTROLLED STUDY; HYDROGEN BOND; MATHEMATICAL COMPUTING; MOLECULAR DYNAMICS; NANOANALYSIS; PROTEIN DOMAIN; PROTEIN FUNCTION; PROTEIN STRUCTURE; STRESS STRAIN RELATIONSHIP; ALGORITHM; ANIMAL; BIOLOGICAL MODEL; BIOLOGY; BIOMECHANICS; CHEMISTRY; CYTOSKELETON; HUMAN; MECHANICAL STRESS; METHODOLOGY; NANOTECHNOLOGY; PHYSIOLOGY; PROTEIN FOLDING; PROTEIN SECONDARY STRUCTURE; STATISTICAL MODEL;

EID: 67650337244     PISSN: None     EISSN: 19326203     Source Type: Journal    
DOI: 10.1371/journal.pone.0006015     Document Type: Article
Times cited : (62)

References (46)
  • 2
    • 0025765110 scopus 로고
    • Viscoelastic Properties of Vimentin Compared with Other Filamentous Biopolymer Networks
    • Janmey PA, Euteneuer U, Traub P, Schliwa M (1991) Viscoelastic Properties of Vimentin Compared with Other Filamentous Biopolymer Networks. Journal of Cell Biology 113: 155-160.
    • (1991) Journal of Cell Biology , vol.113 , pp. 155-160
    • Janmey, P.A.1    Euteneuer, U.2    Traub, P.3    Schliwa, M.4
  • 3
    • 41649116913 scopus 로고    scopus 로고
    • Tensile Properties of Single Desmin Intermediate Filaments
    • Kreplak L, Herrmann H, Aebi U (2008) Tensile Properties of Single Desmin Intermediate Filaments. Biophys J 94: 2790-2799.
    • (2008) Biophys J , vol.94 , pp. 2790-2799
    • Kreplak, L.1    Herrmann, H.2    Aebi, U.3
  • 4
    • 48449103125 scopus 로고    scopus 로고
    • The Intermediate Filament Network in Cultured Human Keratinocytes Is Remarkably Extensible and Resilient
    • Fudge D, Russell D, Beriault D, Moore M, Lane E, et al. (2008) The Intermediate Filament Network in Cultured Human Keratinocytes Is Remarkably Extensible and Resilient. PLoS One 3: e2327.
    • (2008) PLoS One , vol.3
    • Fudge, D.1    Russell, D.2    Beriault, D.3    Moore, M.4    Lane, E.5
  • 7
    • 4544228141 scopus 로고    scopus 로고
    • The nuclear envelope lamina network has elasticity and a compressibility limit suggestive of a molecular shock absorber
    • Dahl KN, Kahn SM, Wilson KL, Discher DE (2004) The nuclear envelope lamina network has elasticity and a compressibility limit suggestive of a molecular shock absorber. Journal of Cell Science 117: 4779-4786.
    • (2004) Journal of Cell Science , vol.117 , pp. 4779-4786
    • Dahl, K.N.1    Kahn, S.M.2    Wilson, K.L.3    Discher, D.E.4
  • 9
    • 0033615969 scopus 로고    scopus 로고
    • Loss of A-type lamin expression compromises nuclear envelope integrity leading to muscular dystrophy
    • Sullivan T, Escalante-Alcalde D, Bhatt H, Anver M, Bhat N, et al. (1999) Loss of A-type lamin expression compromises nuclear envelope integrity leading to muscular dystrophy. Journal of Cell Biology 147: 913-919.
    • (1999) Journal of Cell Biology , vol.147 , pp. 913-919
    • Sullivan, T.1    Escalante-Alcalde, D.2    Bhatt, H.3    Anver, M.4    Bhat, N.5
  • 10
    • 34247505044 scopus 로고    scopus 로고
    • Role of nuclear lamina-cytoskeleton interactions in the maintenance of cellular strength
    • Houben F, Ramaekers FC, Snoeckx LH, Broers JL (2007) Role of nuclear lamina-cytoskeleton interactions in the maintenance of cellular strength. Biochim Biophys Acta 1773: 675-686.
    • (2007) Biochim Biophys Acta , vol.1773 , pp. 675-686
    • Houben, F.1    Ramaekers, F.C.2    Snoeckx, L.H.3    Broers, J.L.4
  • 15
    • 0002492311 scopus 로고    scopus 로고
    • Stretching the alpha-helix: A direct measure of the hydrogen-bond energy of a single-peptide molecule
    • Lantz MA, Jarvis SP, Tokumoto H, Martynski T, Kusumi T, et al. (1999) Stretching the alpha-helix: a direct measure of the hydrogen-bond energy of a single-peptide molecule. Chemical Physics Letters 315: 61-68.
    • (1999) Chemical Physics Letters , vol.315 , pp. 61-68
    • Lantz, M.A.1    Jarvis, S.P.2    Tokumoto, H.3    Martynski, T.4    Kusumi, T.5
  • 16
    • 0037920089 scopus 로고    scopus 로고
    • Insight into conformational changes of a single alpha-helix peptide molecule through stiffness measurements
    • Kageshima M, Lantz MA, Jarvis SP, Tokumoto H, Takeda S, et al. (2001) Insight into conformational changes of a single alpha-helix peptide molecule through stiffness measurements. Chemical Physics Letters 343: 77-82.
    • (2001) Chemical Physics Letters , vol.343 , pp. 77-82
    • Kageshima, M.1    Lantz, M.A.2    Jarvis, S.P.3    Tokumoto, H.4    Takeda, S.5
  • 17
    • 34548407835 scopus 로고    scopus 로고
    • Superelasticity, energy dissipation and strain hardening of vimentin coiled-coil intermediate filaments: Atomistic and continuum studies
    • Ackbarow T, Buehler MJ (2007) Superelasticity, energy dissipation and strain hardening of vimentin coiled-coil intermediate filaments: atomistic and continuum studies. Journal of Materials Science 42: 8771-8787.
    • (2007) Journal of Materials Science , vol.42 , pp. 8771-8787
    • Ackbarow, T.1    Buehler, M.J.2
  • 19
    • 34547675884 scopus 로고    scopus 로고
    • Fracture mechanics of protein materials
    • Buehler MJ, Ackbarow T (2007) Fracture mechanics of protein materials. Materials Today 10: 46-58.
    • (2007) Materials Today , vol.10 , pp. 46-58
    • Buehler, M.J.1    Ackbarow, T.2
  • 20
    • 53049092578 scopus 로고    scopus 로고
    • Theoretical and computational hierarchical nanomechanics of protein materials: Deformation and fracture
    • Buehler MJ, Keten S, Ackbarow T (2008) Theoretical and computational hierarchical nanomechanics of protein materials: Deformation and fracture. Progress in Materials Science 53: 1101-1241.
    • (2008) Progress in Materials Science , vol.53 , pp. 1101-1241
    • Buehler, M.J.1    Keten, S.2    Ackbarow, T.3
  • 24
    • 36749062973 scopus 로고    scopus 로고
    • Hierarchies, multiple energy barriers and robustness govern the fracture mechanics of alpha-helical and beta-sheet protein domains
    • Ackbarow T, Chen X, Keten S, Buehler MJ (2007) Hierarchies, multiple energy barriers and robustness govern the fracture mechanics of alpha-helical and beta-sheet protein domains. P Natl Acad Sci USA 104: 16410-16415.
    • (2007) P Natl Acad Sci USA , vol.104 , pp. 16410-16415
    • Ackbarow, T.1    Chen, X.2    Keten, S.3    Buehler, M.J.4
  • 25
    • 40449091784 scopus 로고    scopus 로고
    • Geometric Confinement Governs the Rupture Strength of H-bond Assemblies at a Critical Length Scale
    • Keten S, Buehler MJ (2008) Geometric Confinement Governs the Rupture Strength of H-bond Assemblies at a Critical Length Scale. Nano Letters 8: 743-748.
    • (2008) Nano Letters , vol.8 , pp. 743-748
    • Keten, S.1    Buehler, M.J.2
  • 28
    • 34249926235 scopus 로고
    • Fracture mechanics and cavitation in rubber-like solids
    • Gent AN, Wang C (1991) Fracture mechanics and cavitation in rubber-like solids. journal of Materials Science 26: 3392-3395.
    • (1991) journal of Materials Science , vol.26 , pp. 3392-3395
    • Gent, A.N.1    Wang, C.2
  • 30
    • 65449132724 scopus 로고    scopus 로고
    • Buehler MJ Rupture mechanics of vimentin intermediate filament tetramers. Journal of Engineering Mechanics (ASCE) 135(5): 422-433.
    • Buehler MJ Rupture mechanics of vimentin intermediate filament tetramers. Journal of Engineering Mechanics (ASCE) 135(5): 422-433.
  • 32
    • 0041319662 scopus 로고    scopus 로고
    • The mechanical properties of hydrated intermediate filaments: Insights from hagfish slime threads
    • Fudge DS, Gardner KH, Forsyth VT, Riekel C, Gosline JM (2003) The mechanical properties of hydrated intermediate filaments: Insights from hagfish slime threads. Biophysical Journal 85: 2015-2027.
    • (2003) Biophysical Journal , vol.85 , pp. 2015-2027
    • Fudge, D.S.1    Gardner, K.H.2    Forsyth, V.T.3    Riekel, C.4    Gosline, J.M.5
  • 33
    • 31144457411 scopus 로고    scopus 로고
    • Dynamical fracture instabilities due to local hyperelasticity at crack tips
    • Buehler MJ, Gao H (2006) Dynamical fracture instabilities due to local hyperelasticity at crack tips. Nature 439: 307-310.
    • (2006) Nature , vol.439 , pp. 307-310
    • Buehler, M.J.1    Gao, H.2
  • 34
    • 0345064192 scopus 로고    scopus 로고
    • Hyperelasticity governs dynamic fracture at a critical length scale
    • Buehler MJ, Abraham FF, Gao H (2003) Hyperelasticity governs dynamic fracture at a critical length scale. Nature 426: 141-146.
    • (2003) Nature , vol.426 , pp. 141-146
    • Buehler, M.J.1    Abraham, F.F.2    Gao, H.3
  • 35
    • 34548165105 scopus 로고    scopus 로고
    • Nanoscale ion mediated networks in bone: Osteopontin can repeatedly dissipate large amounts of energy
    • Fantner GE, Adams J, Turner P, Thurner PJ, Fisher LW, et al. (2007) Nanoscale ion mediated networks in bone: Osteopontin can repeatedly dissipate large amounts of energy. Nano Letters 7: 2491-2498.
    • (2007) Nano Letters , vol.7 , pp. 2491-2498
    • Fantner, G.E.1    Adams, J.2    Turner, P.3    Thurner, P.J.4    Fisher, L.W.5
  • 36
    • 33645765584 scopus 로고    scopus 로고
    • Sacrificial bonds and hidden length: Unraveling molecular mesostructures in tough materials
    • Fantner GE, Oroudjev E, Schitter G, Golde LS, Thurner P, et al. (2006) Sacrificial bonds and hidden length: Unraveling molecular mesostructures in tough materials. Biophysical Journal 90: 1411-1418.
    • (2006) Biophysical Journal , vol.90 , pp. 1411-1418
    • Fantner, G.E.1    Oroudjev, E.2    Schitter, G.3    Golde, L.S.4    Thurner, P.5
  • 37
    • 18044401570 scopus 로고    scopus 로고
    • Biomaterials - Sacrificial bonds heal bone
    • Currey J (2001) Biomaterials - Sacrificial bonds heal bone. Nature 414: 699-699.
    • (2001) Nature , vol.414 , pp. 699-699
    • Currey, J.1
  • 38
    • 0035856905 scopus 로고    scopus 로고
    • Bone indentation recovery time correlates with bond reforming time
    • Thompson JB, Kindt JH, Drake B, Hansma HG, Morse DE, et al. (2001) Bone indentation recovery time correlates with bond reforming time. Nature 414: 773-776.
    • (2001) Nature , vol.414 , pp. 773-776
    • Thompson, J.B.1    Kindt, J.H.2    Drake, B.3    Hansma, H.G.4    Morse, D.E.5
  • 39
    • 0037610831 scopus 로고    scopus 로고
    • Materials become insensitive to flaws at nanoscale: Lessons from nature
    • Gao H, Ji B, Jäger IL, Arzt E, Fratzl P (2003) Materials become insensitive to flaws at nanoscale: Lessons from nature. P Natl Acad Sci USA 100: 5597-5600.
    • (2003) P Natl Acad Sci USA , vol.100 , pp. 5597-5600
    • Gao, H.1    Ji, B.2    Jäger, I.L.3    Arzt, E.4    Fratzl, P.5
  • 40
    • 53049085841 scopus 로고    scopus 로고
    • Elasticity, strength and resilience: A comparative study on mechanical signatures of α-helix, β-sheet and tropocollagen domains
    • Buehler MJ, Keten S (2008) Elasticity, strength and resilience: A comparative study on mechanical signatures of α-helix, β-sheet and tropocollagen domains. Nano Research 1: 63-71.
    • (2008) Nano Research , vol.1 , pp. 63-71
    • Buehler, M.J.1    Keten, S.2
  • 41
    • 34548671447 scopus 로고    scopus 로고
    • Hierarchical chemo-nanomechanics of proteins: Entropic elasticity, protein unfolding and molecular fracture
    • Buehler MJ (2007) Hierarchical chemo-nanomechanics of proteins: Entropic elasticity, protein unfolding and molecular fracture. Journal of Mechanics of Materials and Structures 2: 1019-1057.
    • (2007) Journal of Mechanics of Materials and Structures , vol.2 , pp. 1019-1057
    • Buehler, M.J.1
  • 43
    • 0022519369 scopus 로고
    • The Nuclear Lamina is a Meshwork of intermediate-type filaments
    • Aebi U, Cohn J, Buhle L, Gerace L (1986) The Nuclear Lamina is a Meshwork of intermediate-type filaments. Nature 323: 560-564.
    • (1986) Nature , vol.323 , pp. 560-564
    • Aebi, U.1    Cohn, J.2    Buhle, L.3    Gerace, L.4
  • 44
    • 0001543236 scopus 로고
    • Virial theorem and stress calculation in molecular-dynamics
    • Tsai DH (1979) Virial theorem and stress calculation in molecular-dynamics. J of Chemical Physics 70: 1375-1382.
    • (1979) J of Chemical Physics , vol.70 , pp. 1375-1382
    • Tsai, D.H.1
  • 45
    • 0002467378 scopus 로고
    • Fast parallel algorithms for short-range molecular-dynamics
    • Plimpton S (1995) Fast parallel algorithms for short-range molecular-dynamics. Journal of Computational Physics 117: 1-19.
    • (1995) Journal of Computational Physics , vol.117 , pp. 1-19
    • Plimpton, S.1
  • 46
    • 33846628445 scopus 로고    scopus 로고
    • Biomechanical properties of intermediate filaments: From tissues to single filaments and back
    • Kreplak L, Fudge D (2007) Biomechanical properties of intermediate filaments: from tissues to single filaments and back. Bioessays 29: 26-35.
    • (2007) Bioessays , vol.29 , pp. 26-35
    • Kreplak, L.1    Fudge, D.2


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.