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Volumn 97, Issue 2, 2009, Pages 117-120

Intracellular viral kinetics limited by the supply of amino acids for synthesis of viral proteins

Author keywords

Amino acid supply and consumption; Capsid assembly; Genome replication; Mean field kinetic equations; mRNA and protein synthesis and degradation; Virion release from a cell

Indexed keywords

CAPSID PROTEIN; MESSENGER RNA;

EID: 67649464334     PISSN: 03032647     EISSN: None     Source Type: Journal    
DOI: 10.1016/j.biosystems.2009.05.005     Document Type: Article
Times cited : (6)

References (35)
  • 1
    • 52149092576 scopus 로고    scopus 로고
    • Viruses as supramolecular self-assemblies: modelling of capsid formation and genome packaging
    • Angelescu D.G., and Linse P. Viruses as supramolecular self-assemblies: modelling of capsid formation and genome packaging. Soft Matter 4 (2008) 1981-1990
    • (2008) Soft Matter , vol.4 , pp. 1981-1990
    • Angelescu, D.G.1    Linse, P.2
  • 2
    • 0037066255 scopus 로고    scopus 로고
    • Single virus tracing: visualization of the infection pathway of a virus into a living cell
    • Bräuchle C., Seisenberger G., Endress T., Ried M.U., Bünning H., and Hallek M. Single virus tracing: visualization of the infection pathway of a virus into a living cell. ChemPhysChem 3 (2002) 299-316
    • (2002) ChemPhysChem , vol.3 , pp. 299-316
    • Bräuchle, C.1    Seisenberger, G.2    Endress, T.3    Ried, M.U.4    Bünning, H.5    Hallek, M.6
  • 3
    • 18144385852 scopus 로고    scopus 로고
    • Clustered bottlenecks in mRNA translation and protein synthesis
    • (4 pp.)
    • Chou T., and Lakatos G. Clustered bottlenecks in mRNA translation and protein synthesis. Phys. Rev. Lett. 93 (2004) 198101 (4 pp.)
    • (2004) Phys. Rev. Lett. , vol.93 , pp. 198101
    • Chou, T.1    Lakatos, G.2
  • 4
    • 0036848564 scopus 로고    scopus 로고
    • Interaction of hepatitis C virus proteins with host cell membranes and lipids
    • Dubuisson J., Penin F., and Moradpour D. Interaction of hepatitis C virus proteins with host cell membranes and lipids. Trends Cell Biol. 12 (2002) 517-523
    • (2002) Trends Cell Biol. , vol.12 , pp. 517-523
    • Dubuisson, J.1    Penin, F.2    Moradpour, D.3
  • 5
    • 0035997081 scopus 로고    scopus 로고
    • Model-based analysis of assembly kinetics for virus capsids or other spherical polymers
    • Endres D., and Zlotnick A. Model-based analysis of assembly kinetics for virus capsids or other spherical polymers. Biophys. J. 83 (2002) 1217-1230
    • (2002) Biophys. J. , vol.83 , pp. 1217-1230
    • Endres, D.1    Zlotnick, A.2
  • 6
    • 33645053240 scopus 로고    scopus 로고
    • The origin of viruses and their possible roles in major evolutionary transitions
    • Forterre P. The origin of viruses and their possible roles in major evolutionary transitions. Virus Res. 117 (2006) 5-16
    • (2006) Virus Res. , vol.117 , pp. 5-16
    • Forterre, P.1
  • 7
    • 33845346092 scopus 로고    scopus 로고
    • The ribosome and the mechanism of protein synthesis
    • Frank J., and Spahn C.M.T. The ribosome and the mechanism of protein synthesis. Rep. Progr. Phys. 69 (2006) 1383-1417
    • (2006) Rep. Progr. Phys. , vol.69 , pp. 1383-1417
    • Frank, J.1    Spahn, C.M.T.2
  • 8
    • 0038187637 scopus 로고    scopus 로고
    • Nuclear import of viral DNA genomes
    • Greber U.F., and Fassati A. Nuclear import of viral DNA genomes. Traffic 4 (2003) 136-143
    • (2003) Traffic , vol.4 , pp. 136-143
    • Greber, U.F.1    Fassati, A.2
  • 9
    • 15744395664 scopus 로고    scopus 로고
    • Dynamics of viral infections: incorporating both the intracellular and extracellular levels
    • Haseltine E.L., Rawlings J.B., and Yin J. Dynamics of viral infections: incorporating both the intracellular and extracellular levels. Comput. Chem. Eng. 29 (2005) 675-686
    • (2005) Comput. Chem. Eng. , vol.29 , pp. 675-686
    • Haseltine, E.L.1    Rawlings, J.B.2    Yin, J.3
  • 10
    • 33749241120 scopus 로고    scopus 로고
    • Irreversible growth model for virus capsid assembly
    • (17 pp.)
    • Hicks S.D., and Henley C.L. Irreversible growth model for virus capsid assembly. Phys. Rev. E 74 (2006) 031912 (17 pp.)
    • (2006) Phys. Rev. E , vol.74 , pp. 031912
    • Hicks, S.D.1    Henley, C.L.2
  • 11
    • 33645076499 scopus 로고    scopus 로고
    • Evolutionary genomics of nucleo-cytoplasmic large DNA viruses
    • Iyer L.M., Balaji S., Koonin E.V., and Aravind L. Evolutionary genomics of nucleo-cytoplasmic large DNA viruses. Virus Res. 117 (2006) 156-184
    • (2006) Virus Res. , vol.117 , pp. 156-184
    • Iyer, L.M.1    Balaji, S.2    Koonin, E.V.3    Aravind, L.4
  • 12
    • 33645282189 scopus 로고    scopus 로고
    • Master equation approach to the assembly of viral capsides
    • Keef T., Micheletti C., and Twarock R. Master equation approach to the assembly of viral capsides. J. Theor. Biol. 242 (2006) 713-721
    • (2006) J. Theor. Biol. , vol.242 , pp. 713-721
    • Keef, T.1    Micheletti, C.2    Twarock, R.3
  • 14
    • 0004250845 scopus 로고    scopus 로고
    • Knipe D.M., and Howley M. (Eds), Lippincott Williams & Wilkins, Philadelphia
    • In: Knipe D.M., and Howley M. (Eds). Fields Virology (2001), Lippincott Williams & Wilkins, Philadelphia
    • (2001) Fields Virology
  • 15
    • 43449139691 scopus 로고    scopus 로고
    • Tilable nature of virus capsids and the role of topological constrains in natural capsid desighn
    • (7 pp.)
    • Mannige R.V., and Brooks III C.L. Tilable nature of virus capsids and the role of topological constrains in natural capsid desighn. Phys. Rev. E 77 (2008) 051902 (7 pp.)
    • (2008) Phys. Rev. E , vol.77 , pp. 051902
    • Mannige, R.V.1    Brooks III, C.L.2
  • 17
    • 33845386474 scopus 로고    scopus 로고
    • Viral structural transitions: an all-atom multiscale theory
    • (11 pp.)
    • Miao Y., and Ortoleva P.J. Viral structural transitions: an all-atom multiscale theory. J. Chem. Phys. 125 (2006) 214901 (11 pp.)
    • (2006) J. Chem. Phys. , vol.125 , pp. 214901
    • Miao, Y.1    Ortoleva, P.J.2
  • 19
    • 0036371443 scopus 로고    scopus 로고
    • Modelling viral and immune system dynamics
    • Perelson A.S. Modelling viral and immune system dynamics. Nature. Rev. Immun. 2 (2002) 28-36
    • (2002) Nature. Rev. Immun. , vol.2 , pp. 28-36
    • Perelson, A.S.1
  • 21
    • 57049128122 scopus 로고    scopus 로고
    • Nonspecific interactions in spontaneous assembly of empty versus functional single-stranded RNA viruses
    • (9 pp.)
    • Siber A., and Podgornik R. Nonspecific interactions in spontaneous assembly of empty versus functional single-stranded RNA viruses. Phys. Rev. E 78 (2008) 051915 (9 pp.)
    • (2008) Phys. Rev. E , vol.78 , pp. 051915
    • Siber, A.1    Podgornik, R.2
  • 22
    • 6344270264 scopus 로고    scopus 로고
    • Structured model of influenza virus replication in MDCK cells
    • Sidorenko Y., and Reichl U. Structured model of influenza virus replication in MDCK cells. Biotech. Bioeng. 88 (2004) 1-14
    • (2004) Biotech. Bioeng. , vol.88 , pp. 1-14
    • Sidorenko, Y.1    Reichl, U.2
  • 23
    • 36048995373 scopus 로고    scopus 로고
    • Stochastic population balance modeling of influenza virus replication in vaccine production processes
    • Sidorenko Y., Schulze-Horsel J., Voigt A., Reichl U., and Kienle A. Stochastic population balance modeling of influenza virus replication in vaccine production processes. Chem. Eng. Sci. 63 (2008) 157-169
    • (2008) Chem. Eng. Sci. , vol.63 , pp. 157-169
    • Sidorenko, Y.1    Schulze-Horsel, J.2    Voigt, A.3    Reichl, U.4    Kienle, A.5
  • 24
    • 40949093915 scopus 로고    scopus 로고
    • Stochastic population balance modeling of influenza virus replication in vaccine production processes. II. Detailed description of the replication mechanism
    • Sidorenko Y., Voigt A., Schulze-Horsel J., Reichl U., and Kienle A. Stochastic population balance modeling of influenza virus replication in vaccine production processes. II. Detailed description of the replication mechanism. Chem. Eng. Sci. 63 (2008) 2299-2304
    • (2008) Chem. Eng. Sci. , vol.63 , pp. 2299-2304
    • Sidorenko, Y.1    Voigt, A.2    Schulze-Horsel, J.3    Reichl, U.4    Kienle, A.5
  • 25
    • 1842534392 scopus 로고    scopus 로고
    • How viruses enter animal cells
    • Smith A.E., and Helenius A. How viruses enter animal cells. Science 304 (2004) 237-242
    • (2004) Science , vol.304 , pp. 237-242
    • Smith, A.E.1    Helenius, A.2
  • 26
    • 0036400749 scopus 로고    scopus 로고
    • Stochastic vs. deterministic modeling of intracellular viral kinetics
    • Srivastava R., You L., Summers J., and Yin J. Stochastic vs. deterministic modeling of intracellular viral kinetics. J. Theor. Biol. 218 (2002) 309-321
    • (2002) J. Theor. Biol. , vol.218 , pp. 309-321
    • Srivastava, R.1    You, L.2    Summers, J.3    Yin, J.4
  • 27
    • 0033034676 scopus 로고    scopus 로고
    • Quantitative intracellular kinetics of HIV type 1. AIDS Res
    • Reddy B., and Yin J. Quantitative intracellular kinetics of HIV type 1. AIDS Res. Hum. Retroviruses 15 (1999) 273-283
    • (1999) Hum. Retroviruses , vol.15 , pp. 273-283
    • Reddy, B.1    Yin, J.2
  • 28
    • 38049161762 scopus 로고    scopus 로고
    • Kinetic theory of virus capsid assembly
    • van der Schoot P., and Zandi R. Kinetic theory of virus capsid assembly. Phys. Biol. 4 (2007) 296-304
    • (2007) Phys. Biol. , vol.4 , pp. 296-304
    • van der Schoot, P.1    Zandi, R.2
  • 30
    • 0036901603 scopus 로고    scopus 로고
    • Mathematical models of HIV pathogenesis and treatment
    • Wodarz D., and Nowak M.A. Mathematical models of HIV pathogenesis and treatment. BioEssay 24 (2002) 1178-1187
    • (2002) BioEssay , vol.24 , pp. 1178-1187
    • Wodarz, D.1    Nowak, M.A.2
  • 31
    • 34548558799 scopus 로고    scopus 로고
    • Chemical engineering and virology: challenges and opportunities at the interface
    • Yin J. Chemical engineering and virology: challenges and opportunities at the interface. AICHE J. 53 (2007) 2202-2209
    • (2007) AICHE J. , vol.53 , pp. 2202-2209
    • Yin, J.1
  • 32
    • 7544248159 scopus 로고    scopus 로고
    • Stochastic kinetics of reproduction of virions inside a cell
    • Zhdanov V.P. Stochastic kinetics of reproduction of virions inside a cell. Biosystems 77 (2004) 143-150
    • (2004) Biosystems , vol.77 , pp. 143-150
    • Zhdanov, V.P.1
  • 33
    • 24144470113 scopus 로고    scopus 로고
    • Monte Carlo simulation of bifurcation in the intracellular viral kinetics
    • Zhdanov V.P. Monte Carlo simulation of bifurcation in the intracellular viral kinetics. Phys. Biol. 2 (2005) 46-50
    • (2005) Phys. Biol. , vol.2 , pp. 46-50
    • Zhdanov, V.P.1
  • 34
    • 36448986827 scopus 로고    scopus 로고
    • Kinetic model of HIV infection
    • Zhdanov V.P. Kinetic model of HIV infection. J. Exp. Theor. Phys. 105 (2007) 856-860
    • (2007) J. Exp. Theor. Phys. , vol.105 , pp. 856-860
    • Zhdanov, V.P.1
  • 35
    • 33846820156 scopus 로고    scopus 로고
    • A model for protein translation: polysome self-organization leads to maximum protein synthesis rates
    • Zouridis H., and Hatzimanikatis V. A model for protein translation: polysome self-organization leads to maximum protein synthesis rates. Biophys. J. 92 (2007) 717-730
    • (2007) Biophys. J. , vol.92 , pp. 717-730
    • Zouridis, H.1    Hatzimanikatis, V.2


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