Stochastic kinetics of reproduction of virions inside a cell

BioSystems

Volumn 77, Issue 1-3, 2004, Pages 143-150

  Zhdanov, Vladimir P ^a,b  

^a CHALMERS UNIVERSITY OF TECHNOLOGY   (Sweden)

^b BORESKOV INSTITUTE OF CATALYSIS   (Russian Federation)

Author keywords

Capsid assembly; Genome replication; Monte Carlo simulations; mRNA and protein synthesis; Virion release from a cell

Indexed keywords

CAPSID PROTEIN; MESSENGER RNA; PROTEIN;

GENOME;

ALGORITHM; KINETICS; MONTE CARLO METHOD; PROTEIN SYNTHESIS; REVIEW; RNA SYNTHESIS; SIMULATION; STOCHASTIC MODEL; VIRION; VIRUS CAPSID; VIRUS GENE;

MIRIDAE;

EID: 7544248159     PISSN: 03032647     EISSN: None     Source Type: Journal    
DOI: 10.1016/j.biosystems.2004.05.026     Document Type: Article

References (21)

1. Adolph K.W., Butler P.J.G. Assembly of a spherical plant virus. Phil. Trans. Roy. Soc. London B. 276:1976;113-122
2. Alberts, B., Johnson, A., Lewis, J., Raff, M., Roberts, K., Walter, P., 2002. Molecular Biology of the Cell. Garland, New York.
3. Allen T.E., Palsson B.O. Sequence-based analysis of metabolic demands for protein synthesis in procariontes. J. Theor. Biol. 220:2003;1-18
4. Bocharov G., Klenerman P., Ehl S. Modeling the dynamics of LCMV infection in mice. J. Theor. Biol. 221:2003;349-378
5. Bräuchle C., Seisenberger G., Endress T., Ried M.U., Bünning H., Hallek M. Single virus tracing: visualization of the infection pathway of a virus into a living cell. Chem. Phys. Chem. 3:2002;216-299
6. Ceres P., Zlotnick A. Weak protein-protein interactions are sufficient to drive assembly of hepatitis B virus capsids. Biochem. 41:2002;11525-11531
7. Chiu, W., Burnett, R.M., Garcea, R.L. (Eds.), 1997. Structural Biology of Viruses. Oxford University Press, New York.
8. De Leenheer P., Smith H.L. Virus dynamics: a global analysis. SIAM J. Appl. Math. 63:2003;1313-1327
9. Dubuisson J., Penin F., Moradpour D. Interaction of hepatitis C virus proteins with host cell membranes and lipids. Trends Cell Biol. 12:2002;517-523
10. Endres D., Zlotnick A. Model-based analysis of assembly kinetics for virus capsids or other spherical polymers. Biophys. J. 83:2002;1217-1230
11. Knipe, D.M., Howley, M., (Eds.), 2001. Fields Virology. Lippincott Williams & Wilkins, Philadelphia.
12. Landau, D.P., Binder, K., 2000. A Guide to Monte Carlo simulations in Statistical Physics. Cambridge University Press, Cambridge.
13. Perelson A.S. Modelling viral and immune system dynamics. Nature Rev. Immun. 2:2002;28-36
14. Poranen M.M., Daugelavicius R., Bamford D.H. Common principles in viral entry. Ann. Rev. Microbiol. 56:2002;521-538
15. Pornillos O., Garrus J.E., Sunquist W.I. Mechanisms of enveloped RNA virus budding. Trends Cell Biol. 12:2002;569-579
16. Smith A.E., Helenius A. How viruses enter animal cells. Science. 304:2004;237-242
17. Srivastava R., You L., Summers J., Yin J. Stochastic vs. deterministic modeling of intracellular viral kinetics. J. Theor. Biol. 218:2002;309-321
18. Tuckwell H.C., Wan F.Y.M. On the behaviour of solutions in viral dynamical models. BioSystems. 73:2004;157-161
19. Whittaker G.A., Kann M., Helenius A. Viral entry into the nucleus. Ann. Rev. Cell Dev. Biol. 16:2000;627-651
20. Wodarz D., Nowak M.A. Mathematical models of HIV pathogenesis and treatment. BioEssays. 24:2002;1178-1187
21. cr=100.)