-
1
-
-
0030801002
-
Gapped BLAST and PSI-BLAST: A new generation of protein database search programs
-
DOI 10.1093/nar/25.17.3389
-
S. F. Altschul T. L. Madden A. A. Schaffer J. Zhang Z. Zhang W. Miller 1997 Gapped BLAST and PSI-BLAST: A new generation of protein database search programs Nucleic Acids Research 25 17 3389 3402 (Pubitemid 27359211)
-
(1997)
Nucleic Acids Research
, vol.25
, Issue.17
, pp. 3389-3402
-
-
Altschul, S.F.1
Madden, T.L.2
Schaffer, A.A.3
Zhang, J.4
Zhang, Z.5
Miller, W.6
Lipman, D.J.7
-
2
-
-
0028946084
-
Phylogenetic identification and in situ detection of individual microbial cells without cultivation
-
R. I. Amann W. Ludwig K. H. Schleifer 1995 Phylogenetic identification and in situ detection of individual microbial cells without cultivation Microbiological Reviews 59 143 169
-
(1995)
Microbiological Reviews
, vol.59
, pp. 143-169
-
-
Amann, R.I.1
Ludwig, W.2
Schleifer, K.H.3
-
5
-
-
0042121237
-
Multiple sequence alignment with the Clustal series of programs
-
DOI 10.1093/nar/gkg500
-
R. Chenna H. Sugawara T. Koike R. Lopez T. J. Gibson D. G. Higgins 2003 Multiple sequence alignment with the Clustal series of programs Nucleic Acids Research 31 13 3497 3500 (Pubitemid 37442184)
-
(2003)
Nucleic Acids Research
, vol.31
, Issue.13
, pp. 3497-3500
-
-
Chenna, R.1
Sugawara, H.2
Koike, T.3
Lopez, R.4
Gibson, T.J.5
Higgins, D.G.6
Thompson, J.D.7
-
7
-
-
34250215976
-
Bacterial taxa abundance pattern in an industrial wastewater treatment system determined by the full rRNA cycle approach
-
DOI 10.1111/j.1462-2920.2007.01298.x
-
E. L. Figuerola L. Erijman 2007 Bacterial taxa abundance pattern in an industrial wastewater treatment system determined by the full rRNA cycle approach Environmental Microbiology 9 7 1780 1789 (Pubitemid 46905416)
-
(2007)
Environmental Microbiology
, vol.9
, Issue.7
, pp. 1780-1789
-
-
Figuerola, E.L.M.1
Erijman, L.2
-
9
-
-
0023229528
-
Establishment of the microflora and anaerobic fungi in the rumen of lambs
-
G. Fonty P. Gouet J. P. Jouany J. Senaud 1987 Establishment of the microflora and anaerobic fungi in the rumen of lambs Journal of General Microbiology 133 7 1835 1843 (Pubitemid 17140469)
-
(1987)
Journal of General Microbiology
, vol.133
, Issue.7
, pp. 1835-1843
-
-
Fonty, G.1
Gouet, P.2
Jouany, J.-P.3
Senaud, J.4
-
10
-
-
0037425743
-
Gut flora in health and disease
-
DOI 10.1016/S0140-6736(03)12489-0
-
F. Guarner J. Malagelada 2003 Gut flora in health and disease Lancet 361 9356 512 519 (Pubitemid 36173720)
-
(2003)
Lancet
, vol.361
, Issue.9356
, pp. 512-519
-
-
Guarner, F.1
Malagelada, J.-R.2
-
11
-
-
0034076597
-
Analysis of intestinal flora development in breast-fed and formula-fed infants by using molecular identification and detection methods
-
DOI 10.1097/00005176-200001000-00019
-
H. J. M. Harmsen A. C. M. Wildeboer-Veloo G. C. Raangs A. A. Wagendorp N. Klijn J. G. Bindels 2000 Analysis of intestinal flora development in breast-fed and formula-fed infants by using molecular identification and detection methods Journal of Pediatric Gastroenterology and Nutrition 30 1 61 67 (Pubitemid 30349947)
-
(2000)
Journal of Pediatric Gastroenterology and Nutrition
, vol.30
, Issue.1
, pp. 61-67
-
-
Harmsen, H.J.M.1
Wildeboer-Veloo, A.C.M.2
Raangs, G.C.3
Wagendorp, A.A.4
Klijn, N.5
Bindels, J.G.6
Welling, G.W.7
-
13
-
-
0035487318
-
Counting the Uncountable: Statistical Approaches to Estimating Microbial Diversity
-
DOI 10.1128/AEM.67.10.4399-4406.2001
-
J. B. Hughes J. J. Hellmann T. H. Ricketts B. J. Bohannan 2001 Counting the uncountable: Statistical approaches to estimating microbial diversity Applied and Environmental Microbiology 67 10 4399 4406 (Pubitemid 33646064)
-
(2001)
Applied and Environmental Microbiology
, vol.67
, Issue.10
, pp. 4399-4406
-
-
Hughes, J.B.1
Hellmann, J.J.2
Ricketts, T.H.3
Bohannan, B.J.M.4
-
15
-
-
33745153077
-
Development of Bacteroides 16S rRNA gene taqman-based real-time PCR assays for estimation of total, human, and bovine fecal pollution in water
-
DOI 10.1128/AEM.01036-05
-
A. Layton L. McKay D. Williams V. Garrett R. Gentry G. Sayler 2006 Development of Bacteroides 16S rRNA gene TaqMan-based real-time PCR assays for estimation of total, human, and bovine fecal pollution in water Applied and Environmental Microbiology 72 6 4214 4224 (Pubitemid 43894889)
-
(2006)
Applied and Environmental Microbiology
, vol.72
, Issue.6
, pp. 4214-4224
-
-
Layton, A.1
McKay, L.2
Williams, D.3
Garrett, V.4
Gentry, R.5
Sayler, G.6
-
16
-
-
67449122589
-
-
Rutgers Equine Science Center New Brunswick Malinowski, K. (2007). New Jersey equine industry. New Brunswick: Rutgers Equine Science Center
-
K. Malinowski 2007 New Jersey equine industry Rutgers Equine Science Center New Brunswick Malinowski, K. (2007). New Jersey equine industry. New Brunswick: Rutgers Equine Science Center http://www.hallnj.org/cm/streamer.jsp? dId=1000297&fId=560, http://esc.rutgers.edu/news-more/PDF-Files/2007-Equine- Economic-Impact-Study-Report.pdf.
-
(2007)
New Jersey Equine Industry
-
-
Malinowski, K.1
-
17
-
-
28444451110
-
Reversal of eutrophication following sewage treatment upgrades in the New River Estuary, North Carolina
-
M. A. Mallin M. R. McIver H. A. Wells D. C. Parsons V. L. Johnson 2005 Reversal of eutrophication following sewage treatment upgrades in the New River Estuary, North Carolina Journal Estuaries and Coasts 28 5 750 760 (Pubitemid 41729394)
-
(2005)
Estuaries
, vol.28
, Issue.5
, pp. 750-760
-
-
Mallin, M.A.1
McIver, M.R.2
Wells, H.A.3
Parsons, D.C.4
Johnson, V.L.5
-
18
-
-
0344664531
-
Human milk is a source of lactic acid bacteria for the infant gut
-
DOI 10.1016/j.jpeds.2003.09.028
-
R. Martín S. Langa C. Reviriego E. Jimínez M. L. Marín J. Xaus 2003 Human milk is a source of lactic acid bacteria for the infant gut The Journal of Pediatrics 143 6 754 758 (Pubitemid 37510645)
-
(2003)
Journal of Pediatrics
, vol.143
, Issue.6
, pp. 754-758
-
-
Martin, R.1
Langa, S.2
Reviriego, C.3
Jimenez, E.4
Marin, M.L.5
Xaus, J.6
Fernandez, L.7
Rodriguez, J.M.8
-
19
-
-
33750014515
-
Vertebrate guts shape their microbiota
-
M. McFall-Ngai 2006 Vertebrate guts shape their microbiota Cell 127 2 247 249
-
(2006)
Cell
, vol.127
, Issue.2
, pp. 247-249
-
-
McFall-Ngai, M.1
-
20
-
-
67449135410
-
-
MCHD. Monmouth County Health Department Freehold MCHD (2007). Branch Port Creek sampling stations. Freehold: Monmouth County Health Department
-
MCHD 2007 Branch Port Creek sampling stations Monmouth County Health Department Freehold MCHD (2007). Branch Port Creek sampling stations. Freehold: Monmouth County Health Department http://co.monmouth.nj.us/documents/121/ MonParkWebsiteLarge.pdf.
-
(2007)
Branch Port Creek Sampling Stations
-
-
-
21
-
-
0037992680
-
Evidence for localized bacterial loading as the cause of chronic beach closings in a freshwater marina
-
DOI 10.1016/S0043-1354(03)00068-X
-
S. L. McLellan A. K. Salmore 2003 Evidence for localized bacterial loading as the cause of chronic beach closings in a freshwater marina Water Research 37 11 2700 2708 (Pubitemid 36564848)
-
(2003)
Water Research
, vol.37
, Issue.11
, pp. 2700-2708
-
-
McLellan, S.L.1
Salmore, A.K.2
-
22
-
-
0029084396
-
Intestinal floras of populations that have a high risk of colon cancer
-
W. E. Moore L. H. Moore 1995 Intestinal floras of populations that have a high risk of colon cancer Applied and Environmental Microbiology 61 3202 3207
-
(1995)
Applied and Environmental Microbiology
, vol.61
, pp. 3202-3207
-
-
Moore, W.E.1
Moore, L.H.2
-
23
-
-
67449161135
-
-
NJWC New Jersey weather and climate network
-
NJWC. (2008). New Jersey weather and climate network. http://climate.rutgers.edu/njwxnet/ and Point Pleasant data.
-
(2008)
-
-
-
24
-
-
0029083327
-
Proteolytic activity of the Bacteroides fragilis enterotoxin causes fluid secretion and intestinal damage in vivo
-
R. J. Obiso D. M. Lyerly R. L. van Tassell T. D. Wilkins 1995 Proteolytic activity of the Bacteroides fragilis enterotoxin causes fluid secretion and intestinal damage in vivo Infection and Immunity 63 10 3820 3826
-
(1995)
Infection and Immunity
, vol.63
, Issue.10
, pp. 3820-3826
-
-
Obiso, R.J.1
Lyerly, D.M.2
Van Tassell, R.L.3
Wilkins, T.D.4
-
25
-
-
33745594044
-
The gut flora as a forgotten organ
-
DOI 10.1038/sj.embor.7400731, PII 7400731
-
A. M. O'Hara F. Shanahan 2006 The gut flora as a forgotten organ EMBO Reports 7 7 688 693 (Pubitemid 43986264)
-
(2006)
EMBO Reports
, vol.7
, Issue.7
, pp. 688-693
-
-
O'Hara, A.M.1
Shanahan, F.2
-
28
-
-
33749997498
-
Reciprocal Gut Microbiota Transplants from Zebrafish and Mice to Germ-free Recipients Reveal Host Habitat Selection
-
DOI 10.1016/j.cell.2006.08.043, PII S0092867406012268
-
J. F. Rawls M. A. Mahowald R. E. Ley J. I. Gordon 2006 Reciprocal gut microbiota transplants from zebra fish and mice to germ-free recipients reveal host habitat selection Cell 127 2 423 433 (Pubitemid 44572375)
-
(2006)
Cell
, vol.127
, Issue.2
, pp. 423-433
-
-
Rawls, J.F.1
Mahowald, M.A.2
Ley, R.E.3
Gordon, J.I.4
-
29
-
-
0036339393
-
The effect of feed withdrawal on Escherichia coli shedding in beef cattle
-
DOI 10.1016/S0956-7135(01)00096-2, PII S0956713501000962
-
C. A. Reid S. M. Avery P. Warriss S. Buncic 2002 The effect of feed withdrawal on Escherichia coli shedding in beef cattle Food Control 13 6-7 393 398 (Pubitemid 34855371)
-
(2002)
Food Control
, vol.13
, Issue.6-7
, pp. 393-398
-
-
Reid, C.-A.1
Avery, S.M.2
Warriss, P.3
Buncic, S.4
-
30
-
-
0024207294
-
Survival of Escherichia coli and Salmonella spp. in estuarine environments
-
M. W. Rhodes H. Kator 1988 Survival of Escherichia coli and Salmonella spp. in estuarine environments Applied and Environmental Microbiology 54 12 2902 2907 (Pubitemid 19002383)
-
(1988)
Applied and Environmental Microbiology
, vol.54
, Issue.12
, pp. 2902-2907
-
-
Rhodes, M.W.1
Kator, H.2
-
31
-
-
84888620855
-
Past pandemics and their outcome. Chapter 1
-
CRC Boca Raton 1420060872 Ryan, J. R. (2008). Past pandemics and their outcome. Chapter 1. In J. R. Ryan (Ed.), Pandemic influenza, emergency planning and community awareness. Boca Raton: CRC
-
J. R. Ryan 2008 Past pandemics and their outcome. Chapter 1 J. R. Ryan Pandemic influenza, emergency planning and community awareness CRC Boca Raton 1420060872 Ryan, J. R. (2008). Past pandemics and their outcome. Chapter 1. In J. R. Ryan (Ed.), Pandemic influenza, emergency planning and community awareness. Boca Raton: CRC http://books.google.com/books?hl=en&lr=&id= t13C-eWhOX4C&oi=fnd&pg=PA3&dq=+%22second+cholera+pandemic%22& ots=zVatDXLgK8&sig=FU6M0ynqcUFClM-Ht7XNvVVDi4g ISBN:1420060872.
-
(2008)
Pandemic Influenza, Emergency Planning and Community Awareness
-
-
Ryan, J.R.1
Ryan, J.R.2
-
32
-
-
34447310608
-
Frequent occurrence of the human-specific Bacteroides fecal marker at an open coast marine beach: Relationship to waves, tides and traditional indicators
-
DOI 10.1111/j.1462-2920.2007.01319.x
-
A. E. Santoro A. B. Boehm 2007 Frequent occurrence of the human-specific Bacteroides fecal marker at an open coast marine beach: Relationship to waves, tides and traditional indicators Environmental Microbiology 9 8 2038 2049 (Pubitemid 47057356)
-
(2007)
Environmental Microbiology
, vol.9
, Issue.8
, pp. 2038-2049
-
-
Santoro, A.E.1
Boehm, A.B.2
-
33
-
-
34547421264
-
Relationships between Bacteroides 16S rRNA genetic markers and presence of bacterial enteric pathogens and conventional fecal indicators
-
DOI 10.1016/j.watres.2007.03.028, PII S0043135407002126
-
O. Savichtcheva N. Okayama S. Okabe 2007 Relationships between Bacteroides 16S rRNA genetic markers and presence of bacterial enteric pathogens and conventional fecal indicators Water Research 41 16 3615 3628 (Pubitemid 47176108)
-
(2007)
Water Research
, vol.41
, Issue.16
, pp. 3615-3628
-
-
Savichtcheva, O.1
Okayama, N.2
Okabe, S.3
-
34
-
-
15444362001
-
Introducing DOTUR, a computer program for defining operational taxonomic units and estimating species richness
-
DOI 10.1128/AEM.71.3.1501-1506.2005
-
P. D. Schloss J. Handelsman 2005 Introducing DOTUR, a computer program for defining operational taxonomic units and estimating species richness Applied and Environmental Microbiology 71 3 1501 1506 (Pubitemid 40396689)
-
(2005)
Applied and Environmental Microbiology
, vol.71
, Issue.3
, pp. 1501-1506
-
-
Schloss, P.D.1
Handelsman, J.2
-
35
-
-
39049092823
-
A statistical toolbox for metagenomics: Assessing functional diversity in microbial communities
-
P. D. Schloss J. Handelsman 2008 A statistical toolbox for metagenomics: Assessing functional diversity in microbial communities BMC Bioinformatics 9 34
-
(2008)
BMC Bioinformatics
, vol.9
, pp. 34
-
-
Schloss, P.D.1
Handelsman, J.2
-
36
-
-
4644275463
-
Integration of microbial ecology and statistics: A test to compare gene libraries
-
DOI 10.1128/AEM.70.9.5485-5492.2004
-
P. D. Schloss B. R. Larget Handelsman 2004 Integration of microbial ecology and statistics: A test to compare gene libraries Applied and Environmental Microbiology 70 5485 5492 (Pubitemid 39279626)
-
(2004)
Applied and Environmental Microbiology
, vol.70
, Issue.9
, pp. 5485-5492
-
-
Schloss, P.D.1
Larget, B.R.2
Handelsman, J.3
-
37
-
-
0035463837
-
Quantitative Comparisons of 16S rRNA Gene Sequence Libraries from Environmental Samples
-
DOI 10.1128/AEM.67.9.4374-4376.2001
-
D. R. Singleton M. A. Furlong S. L. Rathbun W. B. Whitman 2001 Quantitative comparisons of 16S rRNA gene sequence libraries from environmental samples Applied and Environmental Microbiology 67 4374 4376 (Pubitemid 33641744)
-
(2001)
Applied and Environmental Microbiology
, vol.67
, Issue.9
, pp. 4374-4376
-
-
Singleton, D.R.1
Furlong, M.A.2
Rathbun, S.L.3
Whitman, W.B.4
-
39
-
-
0004290685
-
-
Churchill London Snow, J. (1855). On the mode of communication of cholera. London: Churchill
-
J. Snow 1855 On the mode of communication of cholera Churchill London Snow, J. (1855). On the mode of communication of cholera. London: Churchill http://www.ph.ucla.edu/epi/snow/broadstreetpump.html, http://www.ph.ucla.edu/ epi/snow/snowbook.html.
-
(1855)
On the Mode of Communication of Cholera
-
-
Snow, J.1
-
40
-
-
34247622189
-
Performance, design, and analysis in microbial source tracking studies
-
DOI 10.1128/AEM.02473-06
-
D. M. Stoeckel V. J. Harwood 2007 Performance, design, and analysis in microbial source tracking studies Applied and Environmental Microbiology 73 8 2405 2415 (Pubitemid 46668731)
-
(2007)
Applied and Environmental Microbiology
, vol.73
, Issue.8
, pp. 2405-2415
-
-
Stoeckel, D.M.1
Harwood, V.J.2
-
41
-
-
0032755259
-
Direct analysis of genes encoding 16S rRNA from complex communities reveals many novel molecular species within the human gut
-
A. Suau R. Bonnet M. Sutren J. J. Godon G. R. Gibson M. D. Collins 1999 Direct analysis of genes encoding 16S rRNA from complex communities reveals many novel molecular species within the human gut Applied and Environmental Microbiology 6 11 4799 4807
-
(1999)
Applied and Environmental Microbiology
, vol.6
, Issue.11
, pp. 4799-4807
-
-
Suau, A.1
Bonnet, R.2
Sutren, M.3
Godon, J.J.4
Gibson, G.R.5
Collins, M.D.6
-
42
-
-
33646592369
-
-
USEPA. US Environmental Protection Agency, Office of Research and Development Cincinnati
-
USEPA (2005). Microbial source tracking guide document. Cincinnati: US Environmental Protection Agency, Office of Research and Development EPA Publication No. EPA/600-R-05-064.
-
(2005)
Microbial Source Tracking Guide Document
-
-
-
44
-
-
0025255488
-
Preprothaumatin II is processed to biological activity in Solanum tuberosum
-
M. Witty 1990 Preprothaumatin II is processed to biological activity in Solanum tuberosum Biotechnology Letters 12 131 136 (Pubitemid 20116581)
-
(1990)
Biotechnology Letters
, vol.12
, Issue.2
, pp. 131-136
-
-
Witty, M.1
|