Substrate specificity of a glucose-6-phosphate isomerase from Pyrococcus furiosus for monosaccharides

Applied Microbiology and Biotechnology

Volumn 83, Issue 2, 2009, Pages 295-303

  Yoon, Ran Young ^a   Yeom, Soo Jin ^a   Park, Chang Su ^a   Oh, Deok Kun ^a  

^a Konkuk University   (South Korea)

Author keywords

Glucose 6 phosphate isomerase; Isomerization; L Talose; Pyrococcus furiosus; Rare sugars; Substrate specificity

Indexed keywords

GLUCOSE-6-PHOSPHATE ISOMERASE; L-TALOSE; PYROCOCCUS FURIOSUS; RARE SUGARS; SUBSTRATE SPECIFICITY;

CHROMATOGRAPHIC ANALYSIS; ELECTRON TRANSITIONS; ENZYME ACTIVITY; ENZYMES; GLUCOSE; ISOMERIZATION; ISOMERS; SUGAR (SUCROSE);

SUBSTRATES;

ARABINOSE; FRIEDELIN; GALACTOSE; GLUCOSE 6 PHOSPHATE ISOMERASE; HEXOSE; HYDROXYL GROUP; KETOSE; MONOSACCHARIDE; PENTOSE; RIBOSE; TAGATOSE;

CATALYSIS; ENZYME; PH; PROKARYOTE; SUBSTRATE; SUGAR;

ANION EXCHANGE CHROMATOGRAPHY; ARTICLE; CATALYSIS; ENZYME ACTIVITY; ENZYME SPECIFICITY; HEAT TREATMENT; ISOMERIZATION; NONHUMAN; NUCLEOTIDE SEQUENCE; PH; PYROCOCCUS FURIOSUS;

ARCHAEAL PROTEINS; ENZYME STABILITY; GLUCOSE-6-PHOSPHATE ISOMERASE; KINETICS; MONOSACCHARIDES; PYROCOCCUS FURIOSUS; SUBSTRATE SPECIFICITY;

PYROCOCCUS FURIOSUS;

EID: 67349245494     PISSN: 01757598     EISSN: None     Source Type: Journal    
DOI: 10.1007/s00253-009-1859-1     Document Type: Article

References (27)

1. JM Berrisford J Akerboom S Brouns SE Sedelnikova AP Turnbull J van der Oost L Salmon R Hardre IA Murray GM Blackburn DW Rice PJ Baker 2004 The structures of inhibitor complexes of Pyrococcus furiosus phosphoglucose isomerase provide insights into substrate binding and catalysis J Mol Biol 343 649 657 (Pubitemid 39311612)
2. JM Berrisford AM Hounslow J Akerboom WR Hagen SJ Brouns J van der Oost IA Murray G Michael Blackburn JP Waltho DW Rice PJ Baker 2006 Evidence supporting a cis-enediol-based mechanism for Pyrococcus furiosus phosphoglucose isomerase J Mol Biol 358 1353 1366
3. EA Cho DW Lee YH Cha SJ Lee HC Jung JG Pan YR Pyun 2007 Characterization of a novel d-lyxose isomerase from Cohnella laevoribosii RI-39 sp. nov J Bacteriol 189 1655 1663 (Pubitemid 46446128)
4. SL Doong CH Tsai RF Schinazi DC Liotta YC Cheng 1991 Inhibition of the replication of hepatitis B virus in vitro by 2',3'-dideoxy-3'-thiacytidine and related analogues Proc Natl Acad Sci USA 88 8495 8499 (Pubitemid 21915383)
5. TB Granström G Takata M Tokuda K Izumori 2004 Izumoring: a novel and complete strategy for bioproduction of rare sugars J Biosci Bioeng 97 89 94 (Pubitemid 38328097)
6. E Groussac M Ortiz J Francois 2000 Improved protocols for quantitative determination of metabolites from biological samples using high performance ionic-exchange chromatography with conductimetric and pulsed amperometric detection Enzyme Microb Technol 26 715 723 (Pubitemid 30345538)
7. T Hansen M Oehlmann P Schonheit 2001 Novel type of glucose-6-phosphate isomerase in the hyperthermophilic archaeon Pyrococcus furiosus J Bacteriol 183 3428 3435 (Pubitemid 32448606)
8. MA Hossain H Wakabayashi F Goda S Kobayashi T Maeba H Maeta 2000 Effect of the immunosuppressants FK506 and d-allose on allogenic orthotopic liver transplantation in rats Transplant Proc 32 2021 2023
9. J Jokela O Pastinen M Leisola 2002 Isomerization of pentose and hexose sugars by an enzyme reactor packed with cross-linked xylose isomerase crystals Enzyme Microb Technol 31 67 76 (Pubitemid 34626817)
10. J Karimaki T Parkkinen H Santa O Pastinen M Leisola J Rouvinen O Turunen 2004 Engineering the substrate specificity of xylose isomerase Protein Eng Des Sel 17 861 869 (Pubitemid 40392909)
11. HJ Kim JH Kim HJ Oh DK Oh 2006 Characterization of a mutated Geobacillus stearothermophilus l-arabinose isomerase that increases the production rate of d-tagatose J Appl Microbiol 101 213 221 (Pubitemid 43952021)
12. K Leang G Takada Y Fukai K Morimoto TB Granstrom K Izumori 2004 Novel reactions of l-rhamnose isomerase from Pseudomonas stutzeri and its relation with d-xylose isomerase via substrate specificity Biochim Biophys Acta 1674 68 77 (Pubitemid 39165817)
13. K Leang G Takada A Ishimura M Okita K Izumori 2004 Cloning, nucleotide sequence, and overexpression of the l-rhamnose isomerase gene from Pseudomonas stutzeri in Escherichia coli Appl Environ Microbiol 70 3298 3304 (Pubitemid 38745871)
14. GV Levin 2002 Tagatose, the new GRAS sweetener and health product J Med Food 5 23 36 (Pubitemid 34462798)
15. GV Levin LR Zehner JP Saunders JR Beadle 1995 Sugar substitutes: their energy values, bulk characteristics and potential health benefits Am J Clin Nutr 62 1161S 1168S
16. G Livesey JC Brown 1996 d-Tagatose is a bulk sweetener with zero energy determined in rats J Nutr 126 1601 1609 (Pubitemid 26184419)
17. T Matsuo K Izumori 2004 d-Psicose, a rare sugar that provides no energy and additionally beneficial effects for clinical nutrition Asia Pac J Clin Nutr 13 S127
18. T Matsuo H Suzuki M Hashiguchi K Izumori 2002 d-Psicose is a rare sugar that provides no energy to growing rats J Nutr Sci Vitaminol (Tokyo) 48 77 80 (Pubitemid 34288929)
19. BT Menavuvu W Poonperm K Takeda K Morimoto TB Granstrom G Takada K Izumori 2006 Novel substrate specificity of d-arabinose isomerase from Klebsiella pneumoniae and its application to production of d-altrose from d-psicose J Biosci Bioeng 102 436 441
20. K Morimoto CS Park M Ozaki K Takeshita T Shimonishi TB Granström G Takada M Tokuda K Izumori 2006 Large scale production of d-allose from d-psicose using continuous bioreactor and separation system Enzyme Microb Technol 38 855 859 (Pubitemid 43255406)
21. S Muniruzzaman YT Pan Y Zeng B Atkins K Izumori AD Elbein 1996 Inhibition of glycoprotein processing by l-fructose and l-xylulose Glycobiology 6 795 803 (Pubitemid 27016381)
22. HY Park CS Park HJ Kim DK Oh 2007 Substrate specificity of a galactose 6-phosphate isomerase from Lactococcus lactis that produces d-allose from d-psicose J Biotechnol 132 88 95 (Pubitemid 47503390)
23. O Pastinen K Visuri HE Schoemaker M Leisola 1999 Novel reaction of xylose isomerase from Streptomyces rubiginosus Enzyme Microb Technol 38 855 859 (Pubitemid 30019207)
24. H Santa J Kammonen O Lehtonen J Karimaki O Pastinen M Leisola O Turunen 2005 Stochastic boundary molecular dynamics simulation of l-ribose in the active site of Actinoplanes missouriensis xylose isomerase and its Val135Asn mutant with improved reaction rate Biochim Biophys Acta 1749 65 73 (Pubitemid 40545916)
25. A Vuolanto O Pastinen HE Schoemaker M Leisola 2002 C-2 Epimer formation of tetrose, pentose and hexose sugars by xylose isomerase Biocatal Biotransform 20 235 240 (Pubitemid 34552386)
26. RY Yoon SJ Yeom HJ Kim DK Oh 2009 Novel substrates of a ribose-5-phosphate isomerase from Clostridium thermocellum J Biotechnol 139 26 32
27. RG Zhang CE Andersson T Skarina E Evdokimova AM Edwards A Joachimiak A Savchenko SL Mowbray 2003 The 2.2 Å resolution structure of RpiB/AlsB from Escherichia coli illustrates a new approach to the ribose-5-phosphate isomerase reaction J Mol Biol 332 1083 1094 (Pubitemid 37108801)