A HUPO test sample study reveals common problems in mass spectrometry-based proteomics

Nature Methods

Volumn 6, Issue 6, 2009, Pages 423-430

  Bell, Alexander W ^a   Deutsch, Eric W ^b   Au, Catherine E ^a   Kearney, Robert E ^a   Beavis, Ron ^c   Sechi, Salvatore ^d   Nilsson, Tommy ^a   Bergeron, John J M ^a   Beardslee, Thomas A ^e   Chappell, Thomas ^f   Meredith, Gavin ^g   Sheffield, Peter ^h   Gray, Phillip ⁱ   Hajivandi, Mahbod ^g   Pope, Marshall ^g   Predki, Paul ^g   Kullolli, Majlinda ^j   Hincapie, Marina ^j   Hancock, William S ^j   Jia, Wei ^k   Song, Lina ^k   Li, Lei ^k   Wei, Junying ^k   Yang, Bing ^k   Wang, Jinglan ^k   Ying, Wantao ^k   Zhang, Yangjun ^k   Cai, Yun ^k   Qian, Xiaohong ^k   He, Fuchu ^k   Meyer, Helmut E ^l   Stephan, Christian ^l   Eisenacher, Martin ^l   Marcus, Katrin ^l   Langenfeld, Elmar ^l   May, Caroline ^l   Carr, Steve A ^m   Ahmad, Rushdy ^m   Zhu, Wenhong ⁿ   Smith, Jeffrey W ⁿ   Hanash, Samir M ^o   Struthers, Jason J ^o   Wang, Hong ^o   Zhang, Qing ^o   An, Yanming ^p   Goldman, Radoslav ^p   Carlsohn, Elisabet ^q   van der Post, Sjoerd ^q   Hung, Kenneth E ^r   Sarracino, David A ^s   Parker, Kenneth ^r   Krastins, Bryan ^s   Kucherlapati, Raju ^r   Bourassa, Sylvie ^t   Poirier, Guy G ^t   Kapp, Eugene ^u   Patsiouras, Heather ^u   Moritz, Robert ^u   Simpson, Richard ^u   Houle, Benoit ^v   LaBoissiere, Sylvie ^a   Metalnikov, Pavel ^w   Nguyen, Vivian ^x   Pawson, Tony ^x   Wong, Catherine C L ^y   Cociorva, Daniel ^y   Yates III, John R ^y   Ellison, Michael J ^z   Lopez Campistrous, Ana ^z   Semchuk, Paul ^z   Wang, Yueju ^aa   Ping, Peipei ^aa   Elia, Giuliano ^ab   Dunn, Michael J ^ab   Wynne, Kieran ^ab   Walker, Angela K ^ac   Strahler, John R ^ac   Andrews, Philip C ^ac   Hood, Brian L ^ad,ae   Bigbee, William L ^ad,af   Conrads, Thomas P ^ad,ae   Smith, Derek ^ag   Borchers, Christoph H ^ag   Lajoie, Gilles A ^ah   Bendall, Sean C ^ah   Speicher, Kaye D ^ai   Speicher, David W ^ai   Fujimoto, Masanori ^aj   Nakamura, Kazuyuki ^aj   Paik, Young Ki ^ak   Cho, Sang Yun ^ak   Kwon, Min Seok ^ak   Lee, Hyoung Joo ^ak   Jeong, Seul Ki ^ak   Chung, An Sung ^ak   Miller, Christine A ^al   Grimm, Rudolf ^al   Williams, Katy ^am   Dorschel, Craig ^an   Falkner, Jayson A ^ac   Martens, Lennart ^ao   Vizcaíno, Juan Antonio ^ao   more..

^a MCGILL UNIVERSITY   (Canada)

^b INSTITUTE FOR SYSTEMS BIOLOGY   (United States)

^c UNIVERSITY OF BRITISH COLUMBIA   (Canada)

^d NATIONAL INSTITUTES OF HEALTH   (United States)

^e Verdezyne Inc   (United States)

^f Biogrammatics Inc   (United States)

^g INVITROGEN CORPORATION   (United States)

^h ALLERGAN INC   (United States)

ⁱ AMBRY GENETICS   (United States)

^j NORTHEASTERN UNIVERSITY   (United States)

^k Beijing Proteome Research Center   (China)

^l RUHR UNIVERSITY BOCHUM   (Germany)

^m MASSACHUSETTS INSTITUTE OF TECHNOLOGY   (United States)

ⁿ BURNHAM INSTITUTE   (United States)

^o Fred Hutchinson Cancer Research Center   (United States)

^p GEORGETOWN UNIVERSITY SCHOOL OF MEDICINE   (United States)

^q UNIVERSITY OF GOTHENBURG   (Sweden)

^r LABORATORY FOR MOLECULAR MEDICINE   (United States)

^s Thermo Fisher Scientific   (United States)

^t UNIVERSITÉ LAVAL   (Canada)

^u WALTER AND ELIZA HALL INSTITUTE OF MEDICAL RESEARCH   (Australia)

^v Genizon BioSciences Incorporated   (Canada)

^w MaRS Centre   (Canada)

^x MOUNT SINAI HOSPITAL   (Canada)

^y SCRIPPS RESEARCH INSTITUTE   (United States)

^z UNIVERSITY OF ALBERTA   (Canada)

^aa UNIVERSITY OF CALIFORNIA   (United States)

^ab UNIVERSITY COLLEGE DUBLIN   (Ireland)

^ac UNIVERSITY OF MICHIGAN MEDICAL SCHOOL   (United States)

^ad UNIVERSITY OF PITTSBURGH CANCER INSTITUTE   (United States)

^ae UNIVERSITY OF PITTSBURGH SCHOOL OF MEDICINE   (United States)

^af UNIVERSITY OF PITTSBURGH   (United States)

^ag UNIVERSITY OF VICTORIA   (Canada)

^ah UNIVERSITY OF WESTERN ONTARIO   (Canada)

^ai WISTAR INSTITUTE   (United States)

^aj YAMAGUCHI UNIVERSITY GRADUATE SCHOOL OF MEDICINE   (Japan)

^ak Yonsei University   (South Korea)

^al AGILENT TECHNOLOGIES   (United States)

^am APPLIED BIOSYSTEMS   (United States)

^an WATERS CORPORATION   (United States)

^ao EUROPEAN BIOINFORMATICS INSTITUTE   (United Kingdom)

more..

Author keywords

[No Author keywords available]

Indexed keywords

BACTERIAL PROTEIN; RECOMBINANT PROTEIN;

ARTICLE; BIOINFORMATICS; DATA BASE; ELECTROSPRAY MASS SPECTROMETRY; ESCHERICHIA COLI; LIQUID CHROMATOGRAPHY; MASS SPECTROMETRY; NONHUMAN; POLYACRYLAMIDE GEL ELECTROPHORESIS; PRIORITY JOURNAL; PROTEIN ANALYSIS; PROTEIN PURIFICATION; PROTEOMICS; QUALITY CONTROL; RELIABILITY; REPRODUCIBILITY; SEARCH ENGINE; SOLUBILITY;

CHROMATOGRAPHY, LIQUID; HUMANS; MASS SPECTROMETRY; PEPTIDE MAPPING; PROTEOME; PROTEOMICS; REPRODUCIBILITY OF RESULTS; SENSITIVITY AND SPECIFICITY;

EID: 67349196123     PISSN: 15487091     EISSN: 15491676     Source Type: Journal    
DOI: 10.1038/nmeth.1333     Document Type: Article

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